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C1

Euk-Vir

Jatropha_mosaic_Nigeria_virus

C1__YP_006905839__Jatropha_mosaic_Nigeria_virus__1213406

Identity

Accession:
YP_006905839 ↗
Protein ID:
C1
Kingdom:
euk

Quality

80.1 mean pLDDT

Taxonomy

Shotokuvirae› Cressdnaviricota› Repensiviricetes› Geplafuvirales› Geminiviridae› Begomovirus› Jatropha_mosaic_Nigeria_virus

TaxID: 1213406

Cluster

View cluster (491 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-115
PDB
Domain cluster: rep: AC1_protein__NP_955735__Euphorbia_leaf_curl_virus__270117__D7-112
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00799.27 best Gemini_AL1 178.1 6.70e-53 100.0% 92.9%
D2 high residues 125-174
PDB
Domain cluster: rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08283.17 best Gemini_AL1_M 48.1 1.50e-12 96.0% 45.8%
D3 high residues 189-343
PDB
Domain cluster: rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08283.17 best Gemini_AL1_M 44.2 2.50e-11 27.7% 41.1%