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C1

Euk-Vir

Sweet_potato_golden_vein_Korea_virus

C1__YP_009666111__Sweet_potato_golden_vein_Korea_virus__2169736

Identity

Accession:
YP_009666111 ↗
Protein ID:
C1
Kingdom:
euk

Quality

81.7 mean pLDDT

Taxonomy

Shotokuvirae› Cressdnaviricota› Repensiviricetes› Geplafuvirales› Geminiviridae› Begomovirus› Sweet_potato_golden_vein_Korea_virus

TaxID: 2169736

Cluster

View cluster (491 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-114
PDB
Domain cluster: rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00799.27 best Gemini_AL1 147.5 2.00e-43 100.0% 93.8%
D2 high residues 123-173
PDB
Domain cluster: rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08283.17 best Gemini_AL1_M 51.1 1.70e-13 94.1% 45.8%
D3 high residues 186-335
PDB
Domain cluster: rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08283.17 best Gemini_AL1_M 44.0 2.90e-11 30.0% 42.1%