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C4L_C10L-like_family_protein

Euk-Vir

Penguinpox_virus

C4L_C10L-like_family_protein__YP_009046007__Penguinpox_virus__648998

Identity

Accession:
YP_009046007 ↗
Protein ID:
C4L_C10L-like_family_protein
Kingdom:
euk

Quality

74.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Avipoxvirus› Penguinpox_virus

TaxID: 648998

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-194
PDB
Domain cluster: rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_1000384819__D2-187
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03336.20 best Pox_C4_C10 182.0 2.30e-53 96.3% 48.4%
D2 high residues 202-352
PDB
D3 high residues 357-406
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09372.16 best PRANC 30.2 6.50e-07 98.0% 44.3%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cofA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.76 69.0 4.65e-01 100.0% 37.2%
3dfgA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 36.0 3.75e-01 76.0% 58.3%
5vc7A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.62 47.0 4.09e-01 100.0% 51.7%
5flmE01 3.40.1340.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain 0.60 50.0 3.79e-01 100.0% 72.1%
2b61A02 1.10.1740.110 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.58 50.0 4.03e-01 100.0% 63.5%
4pkwA02 1.10.2030.10 Mainly Alpha › Orthogonal Bundle › Anthrax toxin lethal factor, domain 3, chain A › Anthrax toxin lethal factor, domain 3, chain A 0.56 38.0 3.55e-01 88.0% 55.6%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.56 44.0 4.36e-01 94.0% 90.6%
4n1kD00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 45.0 3.81e-01 100.0% 76.6%
2vxxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 47.0 3.31e-01 100.0% 41.3%
2uxwA01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 46.0 3.23e-01 100.0% 61.8%
5fgzA02 1.10.3810.10 Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like 0.54 43.0 3.13e-01 96.0% 28.8%
4g6dB02 6.10.140.1800 Special › Helix non-globular › Helix Hairpins › 0.54 43.0 3.78e-01 92.0% 59.3%
3psfA03 1.10.3500.10 Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like 0.54 42.0 2.58e-01 86.0% 14.1%
2hydA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.54 42.0 2.66e-01 94.0% 70.3%
3fghA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.53 40.0 3.76e-01 94.0% 65.7%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.53 41.0 3.29e-01 98.0% 50.0%
2nscA01 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.52 44.0 3.85e-01 98.0% 61.5%
2w3cA02 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 44.0 2.72e-01 98.0% 26.9%
2w82A03 1.10.10.1190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Antirestriction protein ArdA, domain 3 0.50 38.0 3.66e-01 92.0% 87.1%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264036 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.78 55.0 4.25e-01 100.0% 35.2%
4946356 620.1.1.0 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases 0.74 66.0 4.66e-01 100.0% 43.4%
4947367 5059.1.1.0 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.65 40.0 2.98e-01 76.0% 25.6%
3801740 108.1.1.36 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_14 0.63 54.0 4.13e-01 100.0% 75.2%
3391261 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.59 39.0 2.95e-01 80.0% 28.3%
4934319 101.1.2.947 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27234 0.59 41.0 3.76e-01 80.0% 57.1%
3606757 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.59 42.0 3.10e-01 78.0% 30.7%
3430243 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.57 51.0 4.31e-01 100.0% 66.3%
3413026 103.4.1.3 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Med15_N 0.56 45.0 4.19e-01 100.0% 71.4%
5057500 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.56 45.0 3.48e-01 96.0% 49.6%
4039569 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.54 45.0 3.44e-01 94.0% 39.2%
3530130 110.1.1.4 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › PYRIN 0.54 47.0 3.92e-01 100.0% 73.3%
4318194 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.54 43.0 3.38e-01 96.0% 40.0%
4539710 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.53 42.0 3.34e-01 92.0% 40.0%
4599972 306.7.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain 0.53 42.0 3.43e-01 98.0% 42.6%
4431976 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.53 42.0 3.41e-01 98.0% 42.6%
3788981 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 36.0 3.33e-01 74.0% 55.4%
3730112 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.52 37.0 2.85e-01 84.0% 31.5%
3224106 207.1.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.52 41.0 2.53e-01 86.0% 16.4%
4612721 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.51 40.0 3.21e-01 98.0% 40.0%
4110761 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.50 38.0 2.98e-01 88.0% 39.2%
3200385 176.1.1.0 ↗ alpha arrays › Annexin › Annexin › Annexin 0.50 35.0 3.05e-01 78.0% 54.1%