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C4L_C10L-like_family_protein
Euk-VirPigeonpox_virus
C4L_C10L-like_family_protein__YP_009046264__Pigeonpox_virus__10264
Identity
- Accession:
- YP_009046264 ↗
- Protein ID:
- C4L_C10L-like_family_protein
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Avipoxvirus›
Pigeonpox_virus
TaxID: 10264
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-190
Domain cluster:
rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_1000384819__D2-187
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03336.20 best | Pox_C4_C10 | 176.4 | 1.10e-51 | 100.0% | 47.8% |
D2
high
residues 196-288_308-355
D3
high
residues 360-409
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ganA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.65 | 55.0 | 4.04e-01 | 100.0% | 70.1% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 4.75e-01 | 92.0% | 100.0% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.58 | 44.0 | 4.36e-01 | 88.0% | 96.2% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.56 | 45.0 | 3.80e-01 | 100.0% | 65.3% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.15e-01 | 90.0% | 73.4% |
| 5w79A01 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.52 | 41.0 | 3.79e-01 | 92.0% | 100.0% |
| 7wd3A04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 38.0 | 3.48e-01 | 98.0% | 57.7% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.51 | 35.0 | 3.20e-01 | 100.0% | 48.1% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 35.0 | 3.21e-01 | 78.0% | 91.1% |
| 1bvp101 | 1.10.250.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 1 › Bluetongue Virus 10, subunit 1, domain 1 | 0.50 | 36.0 | 2.83e-01 | 80.0% | 93.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4297679 | 101.1.1.45 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrxA | 0.62 | 40.0 | 3.74e-01 | 82.0% | 50.8% |
| 3330460 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.58 | 48.0 | 4.51e-01 | 100.0% | 95.4% |
| 3605979 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.57 | 45.0 | 4.23e-01 | 94.0% | 73.8% |
| 4043299 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.56 | 43.0 | 3.45e-01 | 88.0% | 40.0% |
| 4004635 | 1112.1.1.0 ↗ | alpha arrays › MshE c-di-GMP-binding domain › MshE c-di-GMP-binding domain › MshE c-di-GMP-binding domain | 0.56 | 41.0 | 4.01e-01 | 80.0% | 98.2% |
| 3278142 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.56 | 38.0 | 3.67e-01 | 72.0% | 72.9% |
| 3480480 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 46.0 | 3.05e-01 | 98.0% | 52.9% |
| 4072272 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.55 | 41.0 | 3.31e-01 | 88.0% | 38.3% |
| 3441050 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.54 | 38.0 | 3.60e-01 | 78.0% | 60.0% |
| 3368923 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.54 | 38.0 | 2.72e-01 | 78.0% | 30.6% |
| 3652636 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.54 | 35.0 | 3.08e-01 | 82.0% | 38.7% |
| 4539710 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.54 | 40.0 | 3.29e-01 | 88.0% | 40.0% |
| 4164698 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.54 | 40.0 | 3.30e-01 | 88.0% | 40.9% |
| 5070358 | 101.1.2.913 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Lhr | 0.53 | 39.0 | 3.01e-01 | 88.0% | 33.1% |