←Back to structures

CAJDJY010000002.1__CAD0300479.1__X__00087

Bact-Vir

CAJDJY010000002.1__CAD0300479.1__X__00087

Identity

Kingdom:
phage

Quality

43.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-74_89-139
PDB
D2 high residues 480-598
PDB
D3 medium residues 146-231
PDB
D4 medium residues 656-750
PDB
Domain cluster: rep: LC778250.1__BES53415.1__X__00070__D6-95
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.64 57.0 5.48e-01 100.0% 90.8%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.56 45.0 4.12e-01 89.5% 88.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.93e-01 71.6% 93.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4510105 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 38.0 5.98e-01 97.9% 100.0%
4965811 101.1.1.559 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.77 38.0 4.62e-01 94.7% 73.3%
5028174 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.71 40.0 5.13e-01 87.4% 96.4%
5032172 101.1.1.251 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.54 43.0 4.13e-01 88.4% 87.8%
4938242 5060.2.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.52 31.0 2.78e-01 100.0% 43.1%
5002776 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 38.0 4.09e-01 93.7% 91.3%