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CAKLQA020000002.1__CAH1069079.1__SAMEA5780030_00118__00052
Bact-VirCAKLQA020000002.1__CAH1069079.1__SAMEA5780030_00118__00052
Identity
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-61
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7sf8A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.63 | 45.0 | 2.94e-01 | 75.4% | 44.8% |
| 2iqcA00 | 1.25.40.490 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 36.0 | 2.53e-01 | 70.2% | 65.9% |
| 2vx3C02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 36.0 | 2.40e-01 | 71.9% | 51.5% |
| 7pjjA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 2.81e-01 | 75.4% | 80.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3176105 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.70 | 48.0 | 3.01e-01 | 86.0% | 14.1% |
| 4628855 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.66 | 36.0 | 2.45e-01 | 73.7% | 15.3% |
| 3295705 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.66 | 41.0 | 3.03e-01 | 77.2% | 26.7% |
| 3628118 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.64 | 46.0 | 2.74e-01 | 75.4% | 27.4% |
| 3619566 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.64 | 46.0 | 2.77e-01 | 75.4% | 31.4% |
| 3584535 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.61 | 47.0 | 2.82e-01 | 82.5% | 24.3% |
| 3929962 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.61 | 53.0 | 3.45e-01 | 98.2% | 22.0% |
| 3805877 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.60 | 41.0 | 2.56e-01 | 70.2% | 16.8% |
| 3212403 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.60 | 50.0 | 3.29e-01 | 98.2% | 21.6% |
| 4946992 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.60 | 37.0 | 2.62e-01 | 91.2% | 20.8% |
| 4972677 | 4033.1.1.3 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › HpaB_N | 0.59 | 38.0 | 2.93e-01 | 93.0% | 26.4% |
| 3932494 | 101.1.17.5 ↗ | alpha arrays › HTH › HTH › FF domain › Rab3-GTPase_cat | 0.56 | 34.0 | 2.65e-01 | 93.0% | 27.2% |
| 3896661 | 109.4.1.1486 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS5_N, INTS5_C | 0.55 | 39.0 | 2.17e-01 | 78.9% | 17.5% |
| 3999149 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.52 | 46.0 | 2.75e-01 | 100.0% | 31.8% |
| 3170889 | 109.4.1.148 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 | 0.52 | 44.0 | 2.54e-01 | 100.0% | 10.0% |
| 4946487 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.51 | 41.0 | 2.83e-01 | 100.0% | 53.1% |
| 3777260 | 109.4.1.148 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 | 0.50 | 38.0 | 2.31e-01 | 98.2% | 24.1% |
D2
medium
residues 124-202_216-233
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.69 | 36.0 | 4.68e-01 | 71.1% | 100.0% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 35.0 | 4.14e-01 | 74.2% | 81.4% |
| 2q07A02 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.57 | 36.0 | 4.17e-01 | 78.4% | 95.4% |
| 5b00A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 49.0 | 3.61e-01 | 100.0% | 44.8% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 41.0 | 3.13e-01 | 86.6% | 42.0% |
| 2fiwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 43.0 | 3.72e-01 | 93.8% | 88.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3510726 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.60 | 37.0 | 3.67e-01 | 97.9% | 58.0% |
| 3883903 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.58 | 35.0 | 2.81e-01 | 93.8% | 29.5% |
| 5023433 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.57 | 40.0 | 3.03e-01 | 72.2% | 83.0% |
| 4521054 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 47.0 | 3.51e-01 | 89.7% | 65.6% |
| 3712208 | 2484.8.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) | 0.57 | 43.0 | 3.10e-01 | 81.4% | 30.2% |
| 2472982 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.55 | 49.0 | 3.59e-01 | 100.0% | 43.3% |
| 4219646 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.55 | 41.0 | 3.29e-01 | 81.4% | 87.8% |
| 5031624 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.54 | 32.0 | 3.31e-01 | 91.8% | 61.1% |
| 4973813 | 108.4.1.1 ↗ | alpha arrays › EF-hand › Hypothetical protein MTH865 › Hypothetical protein MTH865 › MTH865 | 0.53 | 32.0 | 3.37e-01 | 73.2% | 65.9% |
| 4243370 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.51 | 38.0 | 2.54e-01 | 78.4% | 97.4% |
| 4396960 | 5054.1.1.7 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA | 0.50 | 35.0 | 3.24e-01 | 81.4% | 56.0% |