←Back to structures
CAKLQA020000003.1__CAH1069484.1__SAMEA5780030_00142__00016
Bact-VirCAKLQA020000003.1__CAH1069484.1__SAMEA5780030_00142__00016
Identity
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-180_340-353
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14897.13 best | EpsG | 62.3 | 6.30e-17 | 85.0% | 46.6% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.60 | 27.0 | 3.92e-01 | 75.8% | 93.2% |
| 3f0cA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 37.0 | 4.17e-01 | 99.5% | 81.2% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.57 | 30.0 | 3.58e-01 | 98.5% | 72.5% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 33.0 | 4.11e-01 | 100.0% | 95.8% |
| 2qibB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 36.0 | 3.53e-01 | 98.5% | 63.0% |
| 2genA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 32.0 | 3.32e-01 | 99.5% | 62.8% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.50 | 43.0 | 3.38e-01 | 92.8% | 65.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975476 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.60 | 33.0 | 3.72e-01 | 78.4% | 68.7% |
| 3877230 | 109.4.1.2031 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, ANAPC3, TPR_8 | 0.59 | 35.0 | 3.09e-01 | 92.8% | 39.0% |
| 4929352 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.56 | 41.0 | 4.02e-01 | 73.7% | 88.3% |
| 3549234 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 36.0 | 4.22e-01 | 93.3% | 100.0% |
| 5072199 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.53 | 32.0 | 3.64e-01 | 96.4% | 79.3% |
| 4956867 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.53 | 33.0 | 3.81e-01 | 97.9% | 83.6% |
| 3266203 | 5050.1.1.22 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1_like | 0.53 | 32.0 | 3.15e-01 | 100.0% | 52.1% |
| 4947883 | 5082.1.1.6 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › ZT_dimer | 0.53 | 31.0 | 3.10e-01 | 72.7% | 53.5% |
| 5055035 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 33.0 | 3.27e-01 | 97.9% | 57.5% |
| 4943622 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.52 | 34.0 | 3.83e-01 | 96.4% | 85.5% |
| 3736449 | 601.1.2.69 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › EOS1 | 0.51 | 40.0 | 4.13e-01 | 82.5% | 92.6% |
| 2988544 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 38.0 | 3.79e-01 | 78.9% | 75.4% |
D2
medium
residues 181-339
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14897.13 best | EpsG | 32.8 | 6.00e-08 | 100.0% | 47.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gi8C00 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.53 | 45.0 | 3.29e-01 | 90.6% | 86.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4271673 | 3352.1.1.27 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › EpsG | 0.79 | 72.0 | 5.63e-01 | 100.0% | 48.0% |
| 4948979 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.58 | 53.0 | 3.74e-01 | 100.0% | 53.5% |
| 3599297 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.55 | 50.0 | 3.54e-01 | 100.0% | 59.4% |
| 3898677 | 3352.1.1.28 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT+PMT_4TMC | 0.55 | 50.0 | 3.57e-01 | 100.0% | 53.1% |
| 5002538 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.53 | 42.0 | 3.82e-01 | 83.6% | 91.8% |
| 3586824 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.53 | 40.0 | 3.04e-01 | 80.5% | 60.7% |
| 3511523 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.52 | 37.0 | 3.41e-01 | 73.0% | 64.3% |
| 4335501 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.51 | 41.0 | 3.70e-01 | 84.9% | 88.6% |
| 3735343 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.51 | 41.0 | 3.61e-01 | 84.9% | 89.4% |