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CAKLQC020000002.1__CAH1070048.1__SAMEA5780033_00257__00001
Bact-VirCAKLQC020000002.1__CAH1070048.1__SAMEA5780033_00257__00001
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 46-177_192-223
Domain cluster:
rep: IMGVR_UViG_3300010155_003386-3300010155-Ga0098047_1000074611__D608-750
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00593.31 best | TonB_dep_Rec_b-barrel | 64.3 | 2.90e-17 | 99.4% | 28.0% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.79 | 69.0 | 4.41e-01 | 100.0% | 23.2% |
| 3cslA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.74 | 70.0 | 4.56e-01 | 100.0% | 32.3% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.74 | 58.0 | 3.80e-01 | 100.0% | 21.2% |
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.73 | 58.0 | 4.14e-01 | 100.0% | 31.7% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.68 | 60.0 | 3.99e-01 | 100.0% | 24.9% |
| 3fhhA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.68 | 62.0 | 4.27e-01 | 100.0% | 31.6% |
| 4k3bA06 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.63 | 51.0 | 3.84e-01 | 99.4% | 37.4% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 59.0 | 4.19e-01 | 100.0% | 38.2% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 59.0 | 3.95e-01 | 100.0% | 43.1% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.61 | 43.0 | 4.81e-01 | 97.6% | 90.1% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 57.0 | 3.91e-01 | 100.0% | 49.6% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 57.0 | 3.81e-01 | 100.0% | 40.6% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 56.0 | 3.79e-01 | 100.0% | 50.1% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 37.0 | 4.06e-01 | 97.0% | 75.6% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 55.0 | 3.78e-01 | 99.4% | 37.7% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.59 | 32.0 | 3.86e-01 | 97.6% | 80.2% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 55.0 | 3.74e-01 | 100.0% | 38.5% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 54.0 | 3.73e-01 | 100.0% | 47.0% |
| 3bryA00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.57 | 53.0 | 4.00e-01 | 100.0% | 58.1% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.57 | 53.0 | 4.23e-01 | 98.2% | 65.6% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 33.0 | 3.47e-01 | 98.2% | 62.8% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 53.0 | 3.77e-01 | 100.0% | 38.1% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.55 | 50.0 | 4.20e-01 | 98.2% | 67.3% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 40.0 | 4.15e-01 | 97.6% | 81.3% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.54 | 51.0 | 3.39e-01 | 100.0% | 36.3% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.53 | 50.0 | 3.67e-01 | 100.0% | 48.5% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.53 | 37.0 | 3.93e-01 | 97.0% | 79.6% |
| 1lshA04 | 2.20.80.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex, chain A, domain 4 › Lipovitellin-phosvitin complex, chain A, domain 4 | 0.52 | 46.0 | 3.93e-01 | 93.3% | 90.0% |
| 3fidA00 | 2.40.128.140 | Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein | 0.51 | 47.0 | 3.85e-01 | 99.4% | 65.9% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.51 | 47.0 | 4.36e-01 | 98.2% | 83.3% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.51 | 39.0 | 4.07e-01 | 95.1% | 83.9% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1828117 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.88 | 85.0 | 5.53e-01 | 100.0% | 30.1% |
| 3391818 | 3070.2.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain | 0.81 | 43.0 | 5.57e-01 | 79.9% | 86.9% |
| 2755875 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.79 | 69.0 | 4.63e-01 | 100.0% | 27.8% |
| 1760802 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.78 | 75.0 | 5.22e-01 | 100.0% | 38.5% |
| 3968958 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.74 | 63.0 | 4.15e-01 | 100.0% | 24.6% |
| 1760440 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.74 | 58.0 | 4.00e-01 | 100.0% | 26.4% |
| 4870099 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.72 | 64.0 | 4.25e-01 | 100.0% | 27.3% |
| 3971477 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.69 | 64.0 | 4.15e-01 | 100.0% | 25.7% |
| 3964794 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.68 | 50.0 | 4.34e-01 | 99.4% | 51.2% |
| 4256431 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.66 | 62.0 | 4.29e-01 | 100.0% | 32.8% |
| None | — | 0.66 | 62.0 | 4.29e-01 | 100.0% | 33.6% | |
| 4132216 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.65 | 62.0 | 4.02e-01 | 100.0% | 27.0% |
| 1769389 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.65 | 61.0 | 4.11e-01 | 100.0% | 44.2% |
| 3942118 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.64 | 44.0 | 3.21e-01 | 78.7% | 27.1% |
| 1933289 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.63 | 59.0 | 3.72e-01 | 100.0% | 25.0% |
| 3839821 | 5084.5.1.51 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TonB_dep_Rec_b-barrel | 0.63 | 60.0 | 4.16e-01 | 100.0% | 51.8% |
| 3979654 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.62 | 58.0 | 3.88e-01 | 100.0% | 41.4% |
| 3965621 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.61 | 58.0 | 3.67e-01 | 100.0% | 35.8% |
| 3716267 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.61 | 41.0 | 3.20e-01 | 100.0% | 34.1% |
| 2719886 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.59 | 56.0 | 3.48e-01 | 99.4% | 33.3% |
| 3839880 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.59 | 55.0 | 3.70e-01 | 100.0% | 49.9% |
| 3970531 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.59 | 55.0 | 3.66e-01 | 100.0% | 44.0% |
| 1883909 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.59 | 55.0 | 3.60e-01 | 100.0% | 29.5% |
| 3070253 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.59 | 55.0 | 3.80e-01 | 100.0% | 43.1% |
| 1761798 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.58 | 55.0 | 3.74e-01 | 100.0% | 38.5% |
| 4358482 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.58 | 55.0 | 3.46e-01 | 100.0% | 51.1% |
| 3969607 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.58 | 53.0 | 4.22e-01 | 98.2% | 66.3% |
| 4591311 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.58 | 54.0 | 3.43e-01 | 100.0% | 39.6% |
| 4377115 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.57 | 53.0 | 3.18e-01 | 98.2% | 16.5% |
| 2841805 | 5084.5.3.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › MtrB_PioB | 0.57 | 54.0 | 3.54e-01 | 100.0% | 30.5% |
| 2103480 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.57 | 53.0 | 4.31e-01 | 98.8% | 62.2% |
| 3978947 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.57 | 52.0 | 3.95e-01 | 100.0% | 47.5% |
| 3944979 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.55 | 49.0 | 4.43e-01 | 100.0% | 71.4% |
| 3055859 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.54 | 50.0 | 3.21e-01 | 100.0% | 25.8% |
| 4522601 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.53 | 50.0 | 3.80e-01 | 100.0% | 47.5% |
| 4417262 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.53 | 39.0 | 3.92e-01 | 97.6% | 74.9% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.53 | 41.0 | 4.17e-01 | 86.6% | 81.9% |
| 4332907 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.53 | 46.0 | 3.51e-01 | 93.3% | 62.2% |
| 3972370 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.52 | 48.0 | 3.66e-01 | 100.0% | 60.3% |
| 5081121 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 44.0 | 4.36e-01 | 97.6% | 82.9% |
| 3838109 | 5084.9.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR | 0.52 | 40.0 | 3.58e-01 | 80.5% | 70.4% |
| 3165475 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.52 | 37.0 | 3.79e-01 | 96.3% | 74.7% |
| 4213133 | 5084.5.1.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB | 0.52 | 48.0 | 3.63e-01 | 100.0% | 48.8% |
| 4025435 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.51 | 41.0 | 3.93e-01 | 91.5% | 73.2% |
| 4458963 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.51 | 48.0 | 3.65e-01 | 100.0% | 47.3% |
| 4025861 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.51 | 41.0 | 4.13e-01 | 92.1% | 82.9% |
D2
medium
residues 178-191_224-324
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.91 | 86.0 | 5.19e-01 | 99.1% | 22.1% |
| 3fhhA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.82 | 78.0 | 4.94e-01 | 100.0% | 24.3% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.80 | 75.0 | 4.57e-01 | 100.0% | 21.5% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.78 | 74.0 | 4.63e-01 | 100.0% | 41.0% |
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.77 | 72.0 | 4.73e-01 | 100.0% | 37.9% |
| 1by5A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.77 | 71.0 | 4.47e-01 | 100.0% | 24.7% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.76 | 70.0 | 4.44e-01 | 100.0% | 28.2% |
| 1bt9A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.75 | 71.0 | 4.91e-01 | 100.0% | 35.9% |
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.74 | 69.0 | 4.60e-01 | 100.0% | 31.9% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.72 | 68.0 | 4.86e-01 | 100.0% | 38.8% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.70 | 66.0 | 4.76e-01 | 100.0% | 38.2% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.67 | 61.0 | 4.62e-01 | 100.0% | 51.7% |
| 4c4vB02 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.65 | 60.0 | 4.12e-01 | 100.0% | 64.9% |
| 1i78B00 | 2.40.128.90 | Mainly Beta › Beta Barrel › Lipocalin › OMPT-like | 0.64 | 58.0 | 4.24e-01 | 96.5% | 59.9% |
| 1vprA03 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 45.0 | 4.06e-01 | 99.1% | 59.9% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.58 | 40.0 | 4.22e-01 | 96.5% | 77.4% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 34.0 | 3.38e-01 | 79.1% | 54.8% |
| 1aq3A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.56 | 41.0 | 3.97e-01 | 78.3% | 68.2% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 48.0 | 4.44e-01 | 93.9% | 73.0% |
| 1lshB00 | 2.20.90.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain | 0.54 | 49.0 | 4.27e-01 | 100.0% | 70.1% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 49.0 | 4.07e-01 | 98.3% | 60.0% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.67e-01 | 77.4% | 82.4% |
| 3f9sB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 3.84e-01 | 86.1% | 99.3% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.51 | 43.0 | 3.60e-01 | 93.0% | 84.7% |
| 2pfcA00 | 3.10.129.30 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain | 0.50 | 44.0 | 3.92e-01 | 94.8% | 97.5% |
| 2gexA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 42.0 | 3.94e-01 | 93.0% | 99.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1828117 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.98 | 95.0 | 5.75e-01 | 100.0% | 24.8% |
| 2755875 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.90 | 87.0 | 5.39e-01 | 100.0% | 26.7% |
| 1760521 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.82 | 78.0 | 4.94e-01 | 100.0% | 24.4% |
| 3965126 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.82 | 76.0 | 5.11e-01 | 98.3% | 35.9% |
| 4256431 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.82 | 76.0 | 4.84e-01 | 98.3% | 25.2% |
| 3968958 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.82 | 77.0 | 4.74e-01 | 100.0% | 23.6% |
| None | — | 0.81 | 75.0 | 4.81e-01 | 98.3% | 26.0% | |
| 3070253 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.78 | 72.0 | 4.62e-01 | 100.0% | 27.3% |
| 4865042 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.77 | 71.0 | 4.59e-01 | 100.0% | 27.0% |
| 4524066 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.77 | 73.0 | 4.50e-01 | 100.0% | 31.5% |
| 3980621 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.76 | 66.0 | 5.30e-01 | 100.0% | 49.8% |
| 3942123 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.75 | 70.0 | 4.62e-01 | 100.0% | 53.5% |
| 3967063 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.72 | 67.0 | 4.95e-01 | 100.0% | 62.9% |
| 3574877 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.71 | 54.0 | 3.87e-01 | 100.0% | 29.4% |
| 3071075 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.70 | 66.0 | 4.63e-01 | 100.0% | 36.5% |
| 3594616 | 1100.1.1.0 ↗ | beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein | 0.68 | 51.0 | 3.92e-01 | 77.4% | 41.6% |
| 2410295 | 5084.5.4.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › PorV | 0.68 | 62.0 | 4.98e-01 | 100.0% | 59.6% |
| 3944481 | 5084.1.1.38 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Toluene_X | 0.66 | 61.0 | 5.58e-01 | 100.0% | 93.9% |
| 4931020 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.62 | 45.0 | 3.23e-01 | 87.0% | 25.1% |
| 5080098 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.62 | 46.0 | 3.30e-01 | 87.8% | 27.0% |
| 4417262 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.60 | 50.0 | 4.38e-01 | 88.7% | 90.4% |
| 4643725 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.58 | 50.0 | 4.13e-01 | 95.7% | 74.3% |
| 4116729 | 5084.1.1.6 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF | 0.58 | 51.0 | 4.41e-01 | 93.9% | 67.6% |
| 3717466 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.57 | 52.0 | 4.39e-01 | 100.0% | 70.5% |
| 4042627 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.56 | 45.0 | 4.02e-01 | 87.0% | 93.5% |
| 3164538 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.56 | 46.0 | 3.85e-01 | 87.8% | 92.8% |
| 3506244 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.55 | 48.0 | 4.16e-01 | 93.9% | 76.4% |
| 4299005 | 5084.1.1.21 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TSA | 0.55 | 46.0 | 3.92e-01 | 92.2% | 55.3% |
| 4464084 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.54 | 47.0 | 3.88e-01 | 95.7% | 74.6% |
| 4222629 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.53 | 45.0 | 4.13e-01 | 93.9% | 73.5% |
| 3690324 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 37.0 | 3.53e-01 | 75.7% | 96.4% |