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CAKLQC020000008.1__CAH1070274.1__SAMEA5780033_00262__00001
Bact-VirCAKLQC020000008.1__CAH1070274.1__SAMEA5780033_00262__00001
Identity
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-56
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ufeA02 | 1.20.58.1950 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 42.0 | 3.94e-01 | 79.1% | 69.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3940812 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.60 | 50.0 | 3.83e-01 | 100.0% | 79.1% |
| 3176977 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.59 | 47.0 | 2.73e-01 | 95.3% | 27.3% |
D2
high
residues 67-129
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 46.0 | 5.07e-01 | 81.0% | 89.4% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 43.0 | 4.09e-01 | 100.0% | 58.1% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.62 | 42.0 | 4.22e-01 | 77.8% | 68.8% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.62 | 56.0 | 4.05e-01 | 100.0% | 37.0% |
| 3kioC01 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 42.0 | 3.73e-01 | 77.8% | 49.5% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.60 | 51.0 | 4.69e-01 | 96.8% | 96.5% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 45.0 | 3.82e-01 | 98.4% | 47.7% |
| 1z1vA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.59 | 45.0 | 4.44e-01 | 85.7% | 95.7% |
| 3d6wB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 38.0 | 3.72e-01 | 71.4% | 60.0% |
| 2byoA00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.58 | 42.0 | 3.07e-01 | 77.8% | 80.9% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 42.0 | 3.23e-01 | 79.4% | 96.0% |
| 4fd0A01 | 2.60.40.3630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 50.0 | 4.66e-01 | 98.4% | 83.5% |
| 4nehA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.57 | 44.0 | 2.75e-01 | 85.7% | 19.5% |
| 3pufL00 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 40.0 | 3.34e-01 | 77.8% | 40.5% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.57 | 48.0 | 3.45e-01 | 100.0% | 47.6% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.56 | 36.0 | 3.57e-01 | 88.9% | 61.5% |
| 6ui4A02 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 2.93e-01 | 73.0% | 61.3% |
| 1erjB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 42.0 | 2.64e-01 | 84.1% | 17.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 37.0 | 3.68e-01 | 77.8% | 67.6% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 46.0 | 3.84e-01 | 100.0% | 73.9% |
| 2ra9A01 | 3.10.540.10 | Alpha Beta › Roll › duf1285 like fold › duf1285 like domain | 0.53 | 37.0 | 3.90e-01 | 96.8% | 85.2% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 33.0 | 3.73e-01 | 79.4% | 93.0% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 39.0 | 3.06e-01 | 79.4% | 100.0% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 45.0 | 3.47e-01 | 100.0% | 70.6% |
| 5efrA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.52 | 38.0 | 3.63e-01 | 77.8% | 69.9% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 46.0 | 3.67e-01 | 100.0% | 76.2% |
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 45.0 | 3.81e-01 | 98.4% | 91.7% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 35.0 | 3.62e-01 | 96.8% | 79.3% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 40.0 | 3.20e-01 | 88.9% | 82.4% |
| 4akgA12 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 36.0 | 3.01e-01 | 77.8% | 75.2% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 42.0 | 3.71e-01 | 100.0% | 86.3% |
| 2re3A01 | 3.10.540.10 | Alpha Beta › Roll › duf1285 like fold › duf1285 like domain | 0.50 | 35.0 | 3.24e-01 | 98.4% | 55.4% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5072041 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.68 | 57.0 | 4.49e-01 | 100.0% | 44.6% |
| 5057283 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.67 | 57.0 | 4.44e-01 | 100.0% | 43.7% |
| 5030401 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.67 | 56.0 | 4.33e-01 | 100.0% | 42.2% |
| 5054951 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.67 | 57.0 | 4.43e-01 | 100.0% | 44.6% |
| 4940128 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.67 | 55.0 | 4.44e-01 | 100.0% | 46.4% |
| 4928148 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.67 | 57.0 | 4.18e-01 | 100.0% | 35.7% |
| 4932090 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.66 | 54.0 | 4.36e-01 | 100.0% | 46.4% |
| 4410774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.65 | 53.0 | 4.35e-01 | 100.0% | 48.7% |
| 3929201 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 35.0 | 3.93e-01 | 87.3% | 67.3% |
| 4177205 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.65 | 52.0 | 4.56e-01 | 100.0% | 58.9% |
| 3839222 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.64 | 58.0 | 4.45e-01 | 100.0% | 45.7% |
| 4929009 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.64 | 57.0 | 4.52e-01 | 100.0% | 48.5% |
| 4183457 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.63 | 53.0 | 3.99e-01 | 100.0% | 39.3% |
| 3839627 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.63 | 58.0 | 4.45e-01 | 100.0% | 47.4% |
| 4680466 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.63 | 52.0 | 4.21e-01 | 100.0% | 47.5% |
| 4101478 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.63 | 57.0 | 4.34e-01 | 100.0% | 49.0% |
| 3838435 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.62 | 56.0 | 4.90e-01 | 100.0% | 67.4% |
| 3926774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.62 | 54.0 | 4.25e-01 | 100.0% | 52.9% |
| 5083506 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.62 | 49.0 | 3.56e-01 | 87.3% | 51.4% |
| 4118349 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.62 | 55.0 | 4.27e-01 | 100.0% | 53.3% |
| 4960057 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.61 | 53.0 | 4.18e-01 | 100.0% | 49.3% |
| 4580960 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.61 | 52.0 | 4.12e-01 | 100.0% | 47.1% |
| 4261355 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.61 | 53.0 | 4.14e-01 | 100.0% | 48.6% |
| 4944989 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.60 | 50.0 | 3.79e-01 | 100.0% | 70.9% |
| 4979786 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.60 | 49.0 | 4.06e-01 | 100.0% | 49.2% |
| 1118859 | 59.1.2.1 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC | 0.59 | 41.0 | 3.20e-01 | 77.8% | 32.9% |
| 4949981 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.59 | 40.0 | 3.18e-01 | 100.0% | 35.2% |
| 4387164 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.59 | 51.0 | 4.11e-01 | 100.0% | 55.4% |
| 3943153 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.59 | 51.0 | 4.06e-01 | 100.0% | 47.7% |
| 5005203 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.59 | 42.0 | 4.00e-01 | 79.4% | 63.7% |
| 4044870 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.59 | 50.0 | 4.02e-01 | 100.0% | 47.4% |
| 3942380 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.59 | 52.0 | 3.83e-01 | 100.0% | 45.2% |
| 4331898 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 51.0 | 4.60e-01 | 100.0% | 76.7% |
| 4952765 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 52.0 | 4.02e-01 | 100.0% | 48.6% |
| 3197151 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.58 | 49.0 | 3.68e-01 | 92.1% | 52.0% |
| 4004773 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 50.0 | 3.98e-01 | 100.0% | 48.0% |
| 3588206 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 52.0 | 3.94e-01 | 100.0% | 51.3% |
| 5028765 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.58 | 49.0 | 3.84e-01 | 100.0% | 76.7% |
| 4453818 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 51.0 | 3.90e-01 | 100.0% | 43.3% |
| 3633569 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.58 | 51.0 | 4.40e-01 | 100.0% | 78.0% |
| 4120466 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 51.0 | 3.99e-01 | 100.0% | 52.6% |
| 3251731 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.57 | 48.0 | 3.74e-01 | 100.0% | 48.4% |
| 3271483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.57 | 49.0 | 3.56e-01 | 100.0% | 39.5% |
| 3588110 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.57 | 51.0 | 3.92e-01 | 100.0% | 55.0% |
| 4112553 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.56 | 49.0 | 3.81e-01 | 100.0% | 49.7% |
| 4153666 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.55 | 49.0 | 3.84e-01 | 100.0% | 53.3% |
| 4093657 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.54 | 48.0 | 3.79e-01 | 100.0% | 52.6% |
| 4206705 | 101.1.8.4 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Flp_C | 0.54 | 48.0 | 3.61e-01 | 100.0% | 56.1% |
| 4988734 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.52 | 34.0 | 2.83e-01 | 100.0% | 36.4% |
| 3286598 | 2498.2.1.0 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain | 0.51 | 37.0 | 2.83e-01 | 81.0% | 62.9% |
| 3259134 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.50 | 42.0 | 2.71e-01 | 93.7% | 54.0% |
| 3983469 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.50 | 44.0 | 3.56e-01 | 100.0% | 57.6% |
| 3936932 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 41.0 | 2.36e-01 | 95.2% | 73.2% |