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CAKLQE020000001.1__CAH1066682.1__SAMEA5780037_00015__00015
Bact-VirCAKLQE020000001.1__CAH1066682.1__SAMEA5780037_00015__00015
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 55-133
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27001.1 best | Phage_T4_Y07B | 31.6 | 2.30e-07 | 97.5% | 60.9% |
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c12A01 | 2.30.30.910 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 40.0 | 4.86e-01 | 74.7% | 78.4% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 45.0 | 5.22e-01 | 75.9% | 83.9% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 41.0 | 5.11e-01 | 75.9% | 95.7% |
| 1m9sA03 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 50.0 | 5.20e-01 | 73.4% | 89.3% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 50.0 | 5.26e-01 | 74.7% | 82.9% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 48.0 | 5.47e-01 | 74.7% | 96.7% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 43.0 | 5.14e-01 | 73.4% | 100.0% |
| 4epcA02 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 48.0 | 5.02e-01 | 72.2% | 93.0% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 50.0 | 4.65e-01 | 77.2% | 69.7% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 42.0 | 4.49e-01 | 79.7% | 72.5% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 48.0 | 4.85e-01 | 75.9% | 75.6% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.66 | 48.0 | 4.93e-01 | 75.9% | 91.9% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.66 | 47.0 | 4.78e-01 | 74.7% | 85.5% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 47.0 | 5.12e-01 | 75.9% | 91.0% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 40.0 | 4.54e-01 | 74.7% | 83.3% |
| 2k5iA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 45.0 | 4.49e-01 | 75.9% | 78.6% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.74e-01 | 79.7% | 90.8% |
| 2ra9A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.59 | 39.0 | 4.04e-01 | 86.1% | 72.6% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.59 | 40.0 | 4.23e-01 | 89.9% | 83.3% |
| 2yg5A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 46.0 | 3.54e-01 | 87.3% | 61.1% |
| 3oftA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.58 | 46.0 | 2.98e-01 | 87.3% | 78.8% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 41.0 | 3.31e-01 | 74.7% | 39.7% |
| 4k22B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 42.0 | 3.08e-01 | 82.3% | 55.9% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.90e-01 | 81.0% | 97.1% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.13e-01 | 74.7% | 82.2% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 35.0 | 3.62e-01 | 73.4% | 67.1% |
| 3f8dB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 42.0 | 3.26e-01 | 82.3% | 63.2% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.55 | 39.0 | 3.66e-01 | 73.4% | 85.6% |
| 4bjzA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 41.0 | 3.36e-01 | 84.8% | 53.0% |
| 2q0lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 41.0 | 3.25e-01 | 84.8% | 66.3% |
| 1dz1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 43.0 | 4.51e-01 | 91.1% | 100.0% |
| 3o0hB02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 37.0 | 3.34e-01 | 73.4% | 96.6% |
| 1o5wA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 41.0 | 3.19e-01 | 87.3% | 59.9% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 39.0 | 2.92e-01 | 81.0% | 78.6% |
| 2v3aA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 37.0 | 3.14e-01 | 73.4% | 91.1% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 37.0 | 4.02e-01 | 75.9% | 92.5% |
| 3rp7A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 3.23e-01 | 86.1% | 54.2% |
| 4zn0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 38.0 | 3.14e-01 | 82.3% | 71.2% |
| 3kkjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 3.24e-01 | 84.8% | 63.4% |
| 4a9wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 40.0 | 2.67e-01 | 87.3% | 86.1% |
| 1xdiA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 36.0 | 3.15e-01 | 74.7% | 98.3% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 38.0 | 3.27e-01 | 82.3% | 86.4% |
| 3ng7X01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 40.0 | 2.95e-01 | 88.6% | 68.3% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 37.0 | 3.83e-01 | 81.0% | 86.3% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230533 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 41.0 | 5.18e-01 | 73.4% | 86.7% |
| 5017637 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.76 | 42.0 | 4.85e-01 | 73.4% | 76.4% |
| 4076879 | 4.1.1.87 ↗ | beta barrels › SH3 › SH3 › SH3 › FLgD_tudor | 0.74 | 41.0 | 4.88e-01 | 74.7% | 84.0% |
| 3546309 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.70 | 50.0 | 5.21e-01 | 75.9% | 78.7% |
| 4110878 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 41.0 | 5.03e-01 | 72.2% | 100.0% |
| 4191690 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.69 | 37.0 | 4.23e-01 | 74.7% | 70.7% |
| 3485745 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 48.0 | 5.50e-01 | 74.7% | 96.7% |
| 4001172 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 49.0 | 5.20e-01 | 74.7% | 84.3% |
| 3531894 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.67 | 48.0 | 5.19e-01 | 74.7% | 98.5% |
| 4947695 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 46.0 | 4.73e-01 | 73.4% | 84.0% |
| 5065570 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.65 | 47.0 | 4.62e-01 | 75.9% | 80.0% |
| 2323952 | 4.29.1.1 ↗ | beta barrels › SH3 › Pyrrolysyl-tRNA synthetase tRNA binding domain › Pyrrolysyl-tRNA synthetase tRNA binding domain › PF31240 | 0.65 | 39.0 | 3.85e-01 | 74.7% | 55.8% |
| 5071546 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.65 | 47.0 | 3.91e-01 | 75.9% | 48.9% |
| 5073807 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.65 | 47.0 | 3.93e-01 | 75.9% | 53.1% |
| 3649741 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.64 | 38.0 | 3.91e-01 | 74.7% | 61.3% |
| 4882420 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.64 | 36.0 | 4.26e-01 | 75.9% | 84.3% |
| 5042313 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.64 | 45.0 | 4.68e-01 | 75.9% | 85.3% |
| 4187800 | 4.1.1.39 ↗ | beta barrels › SH3 › SH3 › SH3 › SHD1 | 0.63 | 43.0 | 4.68e-01 | 87.3% | 91.7% |
| 3595390 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 45.0 | 2.88e-01 | 74.7% | 27.3% |
| 3577864 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.62 | 37.0 | 3.63e-01 | 75.9% | 54.1% |
| 3817476 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.62 | 35.0 | 4.21e-01 | 75.9% | 88.0% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.61 | 38.0 | 4.30e-01 | 75.9% | 83.3% |
| 3240676 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.61 | 44.0 | 3.15e-01 | 75.9% | 43.0% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.60 | 35.0 | 3.89e-01 | 75.9% | 75.0% |
| 3706854 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.60 | 43.0 | 2.83e-01 | 75.9% | 29.1% |
| 3537919 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.59 | 40.0 | 3.87e-01 | 70.9% | 90.0% |
| 5043979 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 41.0 | 4.34e-01 | 73.4% | 82.9% |
| 4792866 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.58 | 44.0 | 3.40e-01 | 83.5% | 95.2% |
| 3963079 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.57 | 42.0 | 3.21e-01 | 82.3% | 59.5% |
| 3713577 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.56 | 41.0 | 2.70e-01 | 77.2% | 29.3% |
| 3737927 | 220.1.1.294 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 | 0.56 | 46.0 | 4.21e-01 | 93.7% | 88.2% |
| 1719415 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.56 | 44.0 | 3.51e-01 | 88.6% | 90.2% |
| 3602410 | 604.1.1.235 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27233 | 0.55 | 44.0 | 3.10e-01 | 87.3% | 88.5% |
| 3958403 | 2003.1.3.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3 | 0.55 | 41.0 | 3.34e-01 | 79.7% | 97.3% |
| 1758508 | 2003.1.2.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.55 | 42.0 | 3.34e-01 | 83.5% | 93.5% |
| 5061852 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.55 | 42.0 | 3.32e-01 | 84.8% | 67.8% |
| 3458035 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.55 | 42.0 | 2.68e-01 | 83.5% | 39.3% |
| 3912274 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.54 | 43.0 | 4.57e-01 | 87.3% | 100.0% |
| 4367857 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.54 | 43.0 | 3.01e-01 | 87.3% | 57.2% |
| 4970156 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.54 | 41.0 | 2.98e-01 | 81.0% | 64.6% |
| 4387924 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.54 | 42.0 | 3.36e-01 | 87.3% | 97.1% |
| 3256843 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.54 | 37.0 | 3.45e-01 | 72.2% | 62.9% |
| 3734415 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.54 | 45.0 | 2.99e-01 | 92.4% | 76.6% |
| 4792845 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.53 | 39.0 | 3.00e-01 | 79.7% | 81.4% |
| None | — | 0.53 | 40.0 | 2.71e-01 | 81.0% | 71.1% | |
| 2073980 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 41.0 | 3.33e-01 | 86.1% | 92.2% |
| 5081361 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 45.0 | 4.25e-01 | 98.7% | 100.0% |
| 4031001 | 2003.1.3.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_3 | 0.53 | 40.0 | 2.72e-01 | 86.1% | 80.6% |
| 4406501 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.52 | 40.0 | 2.96e-01 | 86.1% | 74.2% |
| 3971930 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 37.0 | 3.00e-01 | 74.7% | 73.8% |
| 4021151 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.86e-01 | 82.3% | 28.1% |
| 4871189 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 3.20e-01 | 84.8% | 77.5% |
| 4957336 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 42.0 | 2.68e-01 | 88.6% | 19.0% |
| 4023242 | 220.1.1.187 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C | 0.52 | 35.0 | 3.13e-01 | 72.2% | 67.2% |
| 4183628 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 41.0 | 2.64e-01 | 87.3% | 71.1% |
| 5011138 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 41.0 | 3.08e-01 | 87.3% | 69.5% |
| 4963199 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.51 | 40.0 | 3.18e-01 | 84.8% | 90.3% |
| 4554308 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 37.0 | 2.86e-01 | 75.9% | 66.9% |
| 3903728 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 42.0 | 3.92e-01 | 93.7% | 89.0% |