←Back to structures

CAKLQE020000001.1__CAH1066724.1__SAMEA5780037_00036__00036

Bact-Vir

CAKLQE020000001.1__CAH1066724.1__SAMEA5780037_00036__00036

Identity

Kingdom:
phage

Quality

73.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-100
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3722679 3358.1.1.0 ↗ few secondary structure elements › Zn3Cys9 preSET domain-related › Zn3Cys9 preSET domain-related › Zn3Cys9 preSET domain-related 0.56 29.0 3.40e-01 76.8% 70.0%
3216827 389.2.1.1 ↗ few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL 0.52 23.0 2.78e-01 85.9% 56.9%
D2 medium residues 101-162
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.62 56.0 4.26e-01 100.0% 51.4%
6wm6A01 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.57 42.0 2.90e-01 80.6% 22.4%
4l0mA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.57 43.0 2.96e-01 83.9% 99.6%
7kznP01 3.30.740.10 Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 0.55 41.0 3.65e-01 82.3% 72.0%
2jaqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 39.0 2.83e-01 79.0% 30.2%
3nm6B00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.53 43.0 3.07e-01 100.0% 39.3%
1nj4A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 45.0 3.07e-01 100.0% 44.8%
3eeiA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 42.0 3.01e-01 100.0% 40.7%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3632382 109.4.1.73 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Uso1_p115_head 0.63 42.0 2.56e-01 98.4% 10.5%
3540024 5001.1.1.3 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.63 45.0 2.90e-01 75.8% 89.6%
4266073 513.1.1.1 ↗ a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 0.62 48.0 4.60e-01 100.0% 72.9%
4399943 513.1.1.1 ↗ a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 0.60 46.0 4.08e-01 96.8% 55.9%
4433056 513.1.1.1 ↗ a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 0.60 45.0 4.21e-01 98.4% 63.7%
3725161 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.59 40.0 3.32e-01 98.4% 38.3%
4008317 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 43.0 3.38e-01 79.0% 97.9%
5017772 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.57 48.0 4.12e-01 93.5% 67.0%
5076537 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.56 38.0 2.69e-01 96.8% 23.2%
4113842 513.1.1.1 ↗ a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 0.56 42.0 3.87e-01 98.4% 61.2%
4268590 513.1.1.1 ↗ a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 0.56 43.0 3.91e-01 95.2% 62.4%
4113514 304.51.1.6 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cmr3 0.55 42.0 3.00e-01 100.0% 25.9%
4398761 377.1.1.11 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.54 40.0 3.03e-01 79.0% 34.0%
4186191 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.54 38.0 2.54e-01 75.8% 35.5%
3716480 331.18.1.0 ↗ a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc 0.53 41.0 3.16e-01 88.7% 93.1%
5037483 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.52 38.0 2.81e-01 79.0% 52.6%
3356382 3543.1.1.4 ↗ alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 0.52 42.0 2.86e-01 91.9% 91.5%
4299669 101.1.2.194 ↗ alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH 0.52 41.0 3.48e-01 88.7% 55.6%
4993381 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.52 40.0 3.64e-01 88.7% 85.6%
4588960 377.1.1.11 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.51 36.0 2.87e-01 79.0% 54.2%
D3 medium residues 163-310
PDB