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CAKLQE020000001.1__CAH1066753.1__SAMEA5780037_00052__00052

Bact-Vir

CAKLQE020000001.1__CAH1066753.1__SAMEA5780037_00052__00052

Identity

Kingdom:
phage

Quality

90.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-101
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6xi7B02 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.78 32.0 4.87e-01 98.0% 97.4%
1rj1A00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.59 42.0 3.69e-01 73.0% 79.7%
1jeyB02 2.40.290.10 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › 0.58 28.0 2.26e-01 95.0% 21.4%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 25.0 3.11e-01 99.0% 64.9%
8d3mA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.58 45.0 3.50e-01 86.0% 87.9%
7dfeA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.53 39.0 3.59e-01 76.0% 75.6%
2innB00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.51 43.0 2.82e-01 97.0% 64.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3815263 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.79 35.0 5.18e-01 99.0% 95.6%
4014164 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.73 36.0 4.32e-01 99.0% 70.8%
3559698 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.71 27.0 4.13e-01 92.0% 87.5%
4935807 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 27.0 4.21e-01 91.0% 100.0%
3918443 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.67 29.0 4.15e-01 94.0% 88.9%
3537096 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.65 28.0 4.08e-01 96.0% 97.5%
3762289 386.1.1.106 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FCS 0.65 28.0 4.06e-01 96.0% 97.5%
3772431 3380.1.1.3 ↗ a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › zf-FCS 0.65 28.0 4.15e-01 92.0% 100.0%
3526185 377.9.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS 0.64 27.0 3.78e-01 92.0% 84.4%
3739867 2.1.1.344 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Vfa1 0.63 32.0 3.64e-01 100.0% 63.0%
3566649 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.63 27.0 3.90e-01 94.0% 88.9%
3973833 3636.1.1.0 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.53 37.0 3.09e-01 74.0% 91.1%
3837701 101.1.17.2 ↗ alpha arrays › HTH › HTH › FF domain › FF 0.52 27.0 3.19e-01 91.0% 73.8%
3767360 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.51 31.0 3.32e-01 90.0% 70.6%