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CAKLQE020000001.1__CAH1066827.1__SAMEA5780037_00118__00118

Bact-Vir

CAKLQE020000001.1__CAH1066827.1__SAMEA5780037_00118__00118

Identity

Kingdom:
phage

Quality

66.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 254-313
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1irzA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 43.0 4.27e-01 73.3% 78.1%
4gdxA02 1.10.246.130 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain 0.62 44.0 3.73e-01 78.3% 55.0%
4ottA02 1.10.246.130 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain 0.61 44.0 3.61e-01 80.0% 48.8%
5zjgA02 1.10.246.130 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain 0.61 44.0 3.71e-01 80.0% 52.7%
3g9kD02 1.10.246.230 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.57 40.0 3.80e-01 78.3% 71.2%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 4.08e-01 93.3% 76.2%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 42.0 3.67e-01 83.3% 75.0%
2m3aA00 1.10.10.1900 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like 0.54 45.0 4.44e-01 100.0% 86.6%
7f0uA01 1.10.8.1190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain 0.54 36.0 3.12e-01 71.7% 43.2%
3k9xC02 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.54 26.0 2.93e-01 100.0% 54.5%
5bu6A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.53 43.0 2.95e-01 100.0% 86.4%
2mr9A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.51 34.0 3.82e-01 70.0% 97.7%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1822676 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.73 54.0 5.57e-01 100.0% 87.3%
3967091 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.72 51.0 5.11e-01 75.0% 78.3%
3398554 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 50.0 4.06e-01 75.0% 44.3%
3197445 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 49.0 5.05e-01 75.0% 83.6%
3477654 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.69 47.0 4.91e-01 73.3% 81.8%
3205204 101.1.1.67 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.68 46.0 4.84e-01 71.7% 85.2%
4944661 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 53.0 5.44e-01 100.0% 96.4%
4019885 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.67 46.0 4.73e-01 73.3% 78.2%
3201282 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.67 46.0 4.52e-01 73.3% 66.2%
3800383 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 44.0 4.37e-01 73.3% 80.0%
4626289 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.64 44.0 4.33e-01 73.3% 67.7%
3640035 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 41.0 3.76e-01 73.3% 48.2%
4286139 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.61 52.0 3.76e-01 100.0% 71.6%
3892684 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.58 39.0 4.14e-01 73.3% 86.0%
5077751 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.57 49.0 4.10e-01 98.3% 99.0%
3946981 101.1.2.140 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.55 37.0 3.86e-01 86.7% 80.0%
4142258 2003.1.1.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Malic_M 0.54 42.0 2.81e-01 90.0% 67.1%
3282258 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.53 38.0 3.71e-01 88.3% 68.6%
3588243 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.53 37.0 3.75e-01 100.0% 75.0%
3967118 11.1.1.152 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Enterochelin_N 0.53 40.0 2.99e-01 83.3% 50.0%
3958907 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.52 41.0 2.67e-01 86.7% 95.9%
5002243 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.52 44.0 3.16e-01 100.0% 41.5%
4019282 171.1.1.1 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.50 41.0 2.86e-01 93.3% 68.2%
D2 medium residues 13-141
PDB
Domain cluster: rep: MW460247.1__QRE00508.1__X__00034__D8-134