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CAKLQF020000001.1__CAH1069539.1__SAMEA5780031_00034__00034
Bact-VirCAKLQF020000001.1__CAH1069539.1__SAMEA5780031_00034__00034
Identity
- Kingdom:
- phage
Quality
89.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-91
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 63.0 | 4.78e-01 | 100.0% | 38.3% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.72 | 62.0 | 4.89e-01 | 100.0% | 50.0% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 60.0 | 4.97e-01 | 100.0% | 53.5% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 60.0 | 5.36e-01 | 100.0% | 68.9% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.67 | 56.0 | 5.02e-01 | 100.0% | 67.5% |
| 3obwA03 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.66 | 49.0 | 3.89e-01 | 80.4% | 76.5% |
| 5w36B01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.60 | 51.0 | 3.77e-01 | 96.1% | 77.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3355246 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.80 | 70.0 | 6.06e-01 | 100.0% | 63.7% |
| 4083492 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.77 | 60.0 | 5.61e-01 | 94.1% | 69.2% |
| 3349325 | 5086.1.1.135 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 | 0.75 | 65.0 | 5.65e-01 | 100.0% | 73.8% |
| 4942772 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.74 | 64.0 | 5.98e-01 | 100.0% | 80.0% |
| 3725376 | 192.1.1.15 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF6604 | 0.72 | 59.0 | 5.29e-01 | 100.0% | 63.7% |
| 4950966 | 192.30.1.0 ↗ | alpha bundles › Long alpha-hairpin › SepCysE N-terminal domain › SepCysE N-terminal domain | 0.71 | 59.0 | 5.67e-01 | 98.0% | 83.3% |
| 4089827 | 192.1.1.34 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF444 | 0.71 | 59.0 | 5.30e-01 | 98.0% | 68.0% |
| 3718782 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.70 | 59.0 | 3.90e-01 | 100.0% | 23.5% |
| 5054703 | 7512.1.1.18 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycogen_syn | 0.69 | 59.0 | 3.65e-01 | 98.0% | 16.5% |
| 2772104 | 103.1.1.13 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RNA_pol_Rpo13 | 0.68 | 52.0 | 5.53e-01 | 84.3% | 100.0% |
| 3288178 | 5044.1.1.0 ↗ | extended segments › PsbZ-like › PsbZ-like › PsbZ-like | 0.67 | 56.0 | 5.44e-01 | 100.0% | 88.3% |
| 2324007 | 192.30.1.1 ↗ | alpha bundles › Long alpha-hairpin › SepCysE N-terminal domain › SepCysE N-terminal domain › DUF2100 | 0.66 | 53.0 | 4.95e-01 | 98.0% | 70.0% |
| 4974472 | 7515.1.1.0 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like | 0.61 | 52.0 | 3.03e-01 | 98.0% | 10.4% |
D2
medium
residues 92-194
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4btfA01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.64 | 47.0 | 4.78e-01 | 100.0% | 79.0% |
| 1hciA03 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 42.0 | 4.01e-01 | 78.6% | 58.3% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.63 | 44.0 | 4.34e-01 | 100.0% | 67.0% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.61 | 52.0 | 4.56e-01 | 100.0% | 61.1% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 40.0 | 3.91e-01 | 79.6% | 66.4% |
| 2g0iA00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.55 | 45.0 | 4.42e-01 | 99.0% | 82.0% |
| 3hl1B01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 48.0 | 3.84e-01 | 100.0% | 88.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3905497 | 633.7.1.5 ↗ | alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like › Piezo_TM1-24 | 0.73 | 44.0 | 3.90e-01 | 100.0% | 42.1% |
| 4025692 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.55 | 50.0 | 3.47e-01 | 100.0% | 62.6% |
| 4018092 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.54 | 48.0 | 4.03e-01 | 100.0% | 90.6% |
| 3652692 | 2485.1.1.86 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Alba | 0.54 | 33.0 | 2.70e-01 | 100.0% | 34.6% |
| 4319295 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.52 | 45.0 | 4.51e-01 | 94.2% | 97.1% |
| 4595166 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.52 | 40.0 | 3.12e-01 | 82.5% | 38.7% |
| 4041632 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 44.0 | 4.02e-01 | 97.1% | 89.7% |