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CAKLQF020000001.1__CAH1069651.1__SAMEA5780031_00080__00077

Bact-Vir

CAKLQF020000001.1__CAH1069651.1__SAMEA5780031_00080__00077

Identity

Kingdom:
phage

Quality

87.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 250-465
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.77 53.0 6.30e-01 79.2% 99.3%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.75 55.0 6.11e-01 94.0% 94.7%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.72 44.0 5.40e-01 79.6% 94.3%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.70 45.0 5.43e-01 99.1% 96.5%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.70 40.0 5.21e-01 78.7% 98.4%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.68 44.0 5.41e-01 98.6% 100.0%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.64 31.0 3.76e-01 84.3% 68.6%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 31.0 4.02e-01 99.5% 88.2%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.58 39.0 4.64e-01 93.5% 99.3%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.57 30.0 3.52e-01 88.4% 69.2%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.56 27.0 3.20e-01 88.0% 65.8%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 32.0 3.83e-01 91.7% 81.0%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 37.0 4.01e-01 91.2% 79.6%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.55 44.0 4.82e-01 98.6% 98.9%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 33.0 3.70e-01 91.7% 76.2%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.50 22.0 3.43e-01 90.7% 100.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5058112 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.79 53.0 6.42e-01 77.8% 99.3%
3303563 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.78 54.0 6.22e-01 79.2% 93.8%
3820010 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.78 54.0 6.21e-01 79.2% 93.8%
4204465 881.1.1.36 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF25844 0.78 49.0 6.16e-01 77.8% 100.0%
4974776 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.78 52.0 6.27e-01 78.7% 99.3%
5029047 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.78 53.0 6.37e-01 79.2% 100.0%
3959606 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 54.0 6.08e-01 100.0% 89.9%
4941591 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 52.0 6.24e-01 77.8% 100.0%
4987012 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 53.0 6.29e-01 80.1% 99.3%
4974736 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 51.0 6.19e-01 78.7% 99.3%
1491977 881.1.1.6 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN 0.77 54.0 6.00e-01 100.0% 87.0%
5034702 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 53.0 6.30e-01 82.4% 100.0%
3273247 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 53.0 6.26e-01 78.7% 99.3%
4953273 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 50.0 6.13e-01 78.7% 100.0%
4954283 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.76 48.0 5.68e-01 78.2% 90.7%
4941093 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.76 52.0 6.14e-01 95.4% 99.3%
4940119 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.75 52.0 6.13e-01 82.4% 98.7%
3280926 881.1.1.6 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN 0.75 54.0 5.97e-01 100.0% 90.8%
3269423 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.75 53.0 6.14e-01 77.8% 99.4%
4928369 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.75 44.0 5.52e-01 75.9% 93.3%
2516709 881.1.1.6 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN 0.74 52.0 5.78e-01 100.0% 88.4%
3295586 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.73 55.0 6.22e-01 78.2% 99.4%
3805100 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.73 57.0 6.06e-01 79.6% 98.9%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.73 49.0 5.84e-01 79.2% 99.3%
5028155 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.73 51.0 5.93e-01 94.9% 99.4%
4953666 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.72 48.0 5.80e-01 78.2% 100.0%
3973908 881.1.1.25 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 0.72 51.0 5.92e-01 97.7% 99.4%
1286181 881.1.1.7 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3805 0.72 44.0 5.47e-01 79.6% 97.1%
4974235 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.71 51.0 5.78e-01 79.2% 94.5%
4928436 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.71 47.0 5.72e-01 97.2% 100.0%
3972141 881.1.1.25 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 0.71 50.0 5.85e-01 97.2% 100.0%
3323226 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.71 48.0 5.65e-01 80.1% 97.3%
4936151 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.70 51.0 5.87e-01 78.2% 99.4%
7051 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.70 45.0 5.43e-01 99.1% 96.5%
3966459 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.69 44.0 5.42e-01 99.1% 99.3%
2717340 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.68 45.0 5.31e-01 99.1% 95.3%
3597443 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.68 45.0 5.30e-01 100.0% 96.0%
4951804 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.67 43.0 5.27e-01 99.1% 99.3%
3290484 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 50.0 5.46e-01 99.5% 96.0%
2123690 881.1.1.9 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Tli4_C 0.64 43.0 5.05e-01 98.1% 93.0%
3322470 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.63 54.0 5.65e-01 95.4% 98.5%
4965879 881.1.1.44 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 0.62 50.0 5.40e-01 100.0% 97.8%
4260435 881.1.1.6 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN 0.62 47.0 5.12e-01 93.5% 91.4%
3278991 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 44.0 5.02e-01 100.0% 96.4%
3281520 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 49.0 5.07e-01 100.0% 90.5%
4483219 881.5.1.1 a+b three layers › Mog1p/PsbP-like › Respiratory growth induced protein 1 › Respiratory growth induced protein 1 › RGI1 0.59 39.0 4.76e-01 86.6% 100.0%
4597964 881.5.1.0 a+b three layers › Mog1p/PsbP-like › Respiratory growth induced protein 1 › Respiratory growth induced protein 1 0.59 40.0 4.80e-01 93.5% 100.0%
3167349 881.5.1.1 a+b three layers › Mog1p/PsbP-like › Respiratory growth induced protein 1 › Respiratory growth induced protein 1 › RGI1 0.59 40.0 4.80e-01 93.5% 100.0%
3289852 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 48.0 5.05e-01 99.5% 95.3%
3961612 881.1.1.8 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C 0.55 48.0 4.95e-01 99.1% 97.5%
3952886 881.1.1.8 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C 0.54 49.0 4.92e-01 99.5% 95.8%
3577548 331.12.1.0 a+b two layers › TBP-like › YugN-like › YugN-like 0.53 27.0 3.54e-01 99.5% 88.5%
3251351 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.53 26.0 3.33e-01 91.7% 79.2%
3974655 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.53 34.0 4.14e-01 96.8% 100.0%
4014240 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 26.0 3.06e-01 95.4% 68.3%
D2 medium residues 3-143
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.79 44.0 5.72e-01 91.5% 97.5%
2iiiA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.70 53.0 5.70e-01 94.3% 92.5%
2od4B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 44.0 5.41e-01 91.5% 100.0%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 45.0 5.34e-01 94.3% 97.9%
1qltA03 3.40.462.10 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain 0.68 44.0 3.70e-01 90.1% 39.8%
3c19A01 3.30.70.1380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like 0.67 43.0 4.92e-01 95.0% 90.9%
3maeA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.66 54.0 4.58e-01 87.2% 86.3%
2bvfA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.64 43.0 3.78e-01 98.6% 46.2%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 39.0 4.52e-01 92.2% 85.1%
1mwqA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.63 44.0 5.03e-01 95.7% 99.0%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.63 45.0 5.04e-01 92.9% 95.4%
6lpnA03 3.30.70.2190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 45.0 4.93e-01 95.0% 90.4%
5aj3F00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.62 45.0 4.76e-01 98.6% 84.6%
5t0oA02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.62 41.0 4.69e-01 92.2% 92.2%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.61 39.0 4.68e-01 90.1% 100.0%
1xmbA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 41.0 4.76e-01 92.2% 96.0%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 50.0 4.41e-01 86.5% 78.4%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 38.0 4.57e-01 95.0% 96.7%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.61 38.0 4.62e-01 86.5% 100.0%
7dluA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 35.0 4.39e-01 86.5% 100.0%
1em2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 49.0 4.23e-01 86.5% 75.2%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.59 52.0 4.29e-01 95.7% 92.8%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 43.0 4.77e-01 92.9% 99.1%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 4.62e-01 83.7% 94.5%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 4.54e-01 86.5% 94.4%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 3.97e-01 85.8% 68.0%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 45.0 4.54e-01 85.1% 92.8%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 45.0 4.34e-01 86.5% 95.0%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 4.53e-01 90.1% 100.0%
5u89A02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.55 44.0 4.21e-01 86.5% 75.9%
3v2uC02 3.30.70.3170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 36.0 4.24e-01 91.5% 100.0%
2jgpA02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.54 46.0 4.23e-01 93.6% 84.9%
7c1hB01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 43.0 4.07e-01 86.5% 75.6%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 43.0 3.94e-01 85.1% 78.3%
3tx8A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 4.48e-01 92.2% 100.0%
6mfxA02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 43.0 4.13e-01 86.5% 78.1%
1z01A01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 43.0 3.47e-01 87.2% 62.2%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 4.08e-01 89.4% 98.8%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.51 42.0 4.38e-01 89.4% 100.0%
3v3sA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 38.0 3.16e-01 78.0% 89.6%
3gcfA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.51 41.0 3.44e-01 86.5% 70.5%
3qhyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 37.0 3.15e-01 77.3% 92.2%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 40.0 3.69e-01 87.2% 90.2%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4405956 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 42.0 5.14e-01 90.8% 85.6%
3866131 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.74 43.0 5.45e-01 92.9% 100.0%
4977318 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 46.0 5.61e-01 95.0% 97.8%
5043329 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 43.0 5.40e-01 93.6% 96.5%
4226508 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.73 44.0 5.47e-01 93.6% 100.0%
3671314 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.72 44.0 3.55e-01 96.5% 33.1%
3226061 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.72 40.0 5.20e-01 92.2% 100.0%
4085092 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.72 47.0 5.53e-01 95.7% 97.9%
4992138 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.70 43.0 5.16e-01 96.5% 94.4%
3629469 304.4.1.53 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › R1_ABCA1 0.70 41.0 5.10e-01 95.7% 95.3%
3355161 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 43.0 5.06e-01 92.9% 89.5%
4954913 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.70 43.0 5.06e-01 93.6% 90.5%
5053080 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.70 41.0 5.20e-01 89.4% 100.0%
148700 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.69 45.0 5.34e-01 94.3% 97.9%
3945401 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.69 42.0 5.17e-01 94.3% 100.0%
3284477 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.69 42.0 5.17e-01 92.9% 100.0%
5079732 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 43.0 5.20e-01 99.3% 100.0%
3742497 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.67 46.0 4.98e-01 87.2% 84.3%
5053097 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 44.0 5.23e-01 96.5% 98.9%
2533026 304.159.1.1 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C 0.66 43.0 4.85e-01 96.5% 84.4%
5023983 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.66 43.0 4.93e-01 95.0% 91.0%
3992359 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.66 43.0 4.97e-01 85.1% 92.0%
4933494 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.66 44.0 5.18e-01 96.5% 100.0%
4984065 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.66 41.0 4.57e-01 95.7% 79.1%
4946216 304.4.1.83 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › HTH_24 0.66 43.0 4.56e-01 98.6% 74.4%
3926012 304.4.1.52 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7153 0.66 46.0 4.39e-01 94.3% 61.8%
3408002 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.65 44.0 4.88e-01 96.5% 87.3%
3421583 304.27.1.0 a+b two layers › Alpha-beta plaits › Formiminotransferase domain of formiminotransferase-cyclodeaminase. › Formiminotransferase domain of formiminotransferase-cyclodeaminase. 0.65 43.0 4.91e-01 97.9% 90.5%
4216562 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.65 41.0 4.91e-01 95.0% 98.9%
3822070 331.10.2.8 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › SAM_decarbox 0.64 48.0 5.27e-01 89.4% 97.4%
5047447 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 45.0 4.83e-01 95.0% 84.2%
4456367 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.64 45.0 4.80e-01 86.5% 83.2%
5165 304.4.1.3 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII 0.63 44.0 5.03e-01 95.7% 99.0%
3282978 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.63 51.0 4.92e-01 85.1% 88.7%
3487063 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.63 43.0 4.97e-01 85.8% 100.0%
3232018 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.63 46.0 4.63e-01 98.6% 74.5%
3962288 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.62 51.0 5.31e-01 86.5% 96.9%
3397248 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.62 41.0 4.92e-01 94.3% 100.0%
3343085 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.61 50.0 4.83e-01 86.5% 95.0%
4469636 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.61 38.0 4.59e-01 90.1% 100.0%
3291118 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.61 49.0 4.84e-01 85.1% 92.0%
3981106 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.61 50.0 4.90e-01 86.5% 92.7%
3289957 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.61 49.0 4.93e-01 84.4% 94.3%
3654098 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.61 50.0 4.47e-01 87.2% 89.2%
5041562 331.3.1.26 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2867 0.60 49.0 4.74e-01 86.5% 93.8%
4009025 304.4.1.21 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › FtsX_ECD 0.60 43.0 4.96e-01 93.6% 100.0%
3954672 331.3.1.52 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF28469 0.60 49.0 4.75e-01 85.8% 97.4%
3469819 304.12.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.60 45.0 4.81e-01 96.5% 91.7%
3278071 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 47.0 4.65e-01 84.4% 94.7%
5038503 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.59 48.0 4.90e-01 85.8% 98.5%
3290991 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 48.0 4.74e-01 86.5% 90.0%
4768398 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.59 51.0 4.39e-01 93.6% 94.5%
3277811 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 48.0 4.80e-01 86.5% 95.2%
3897523 304.12.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.58 41.0 4.37e-01 97.2% 84.2%
5040875 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.58 48.0 4.70e-01 87.2% 89.7%
4993408 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.58 47.0 4.54e-01 85.8% 86.3%
3403417 898.1.1.0 a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 0.57 40.0 3.92e-01 97.2% 65.2%
3275260 331.4.1.6 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DEPDC5_CTD 0.57 38.0 4.50e-01 100.0% 98.9%
3972673 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.57 47.0 4.55e-01 87.2% 87.7%
4626453 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.57 52.0 4.49e-01 99.3% 96.7%
3953847 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.57 46.0 4.45e-01 85.8% 89.9%
3278661 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.57 46.0 4.45e-01 87.2% 85.6%
3954338 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.56 40.0 3.68e-01 73.8% 77.3%
3725920 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.56 37.0 4.38e-01 95.7% 100.0%
3484999 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 45.0 4.47e-01 87.2% 97.3%
3915011 389.1.1.7 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA 0.55 40.0 3.91e-01 100.0% 66.3%
3653591 331.2.1.7 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung 0.55 46.0 4.61e-01 90.8% 100.0%
4091812 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.54 44.0 3.46e-01 85.8% 76.3%
3215328 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.54 44.0 3.74e-01 87.9% 73.2%
3598878 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 38.0 3.57e-01 73.0% 72.8%
6313 331.3.1.13 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Aromatic_hydrox 0.53 43.0 3.49e-01 87.9% 86.4%
3242509 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.53 44.0 4.48e-01 100.0% 92.6%
3415098 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 42.0 3.95e-01 85.8% 100.0%
3634274 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.52 31.0 3.49e-01 86.5% 74.5%
3961324 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.52 42.0 3.69e-01 86.5% 71.9%
1622846 331.3.1.13 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Aromatic_hydrox 0.51 41.0 3.50e-01 86.5% 75.4%
3883246 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.50 40.0 3.82e-01 85.8% 98.2%
D3 medium residues 144-227
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f1fA02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.69 43.0 4.49e-01 76.2% 67.9%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.64 45.0 4.39e-01 75.0% 66.7%
3aqpA02 3.30.70.3220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 45.0 3.65e-01 75.0% 44.4%
1konA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.63 40.0 4.21e-01 75.0% 72.0%
3encA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.63 45.0 4.63e-01 75.0% 83.5%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.62 39.0 4.08e-01 76.2% 68.8%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 44.0 4.57e-01 75.0% 88.7%
3n79A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.61 42.0 4.35e-01 76.2% 76.9%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 39.0 4.24e-01 75.0% 80.0%
3b82A06 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 40.0 3.53e-01 76.2% 47.1%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.60 43.0 4.59e-01 76.2% 86.7%
2ewhA01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.60 41.0 4.13e-01 76.2% 70.6%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.59 43.0 4.29e-01 76.2% 75.3%
1vx4407 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 40.0 4.29e-01 73.8% 85.5%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.58 41.0 3.83e-01 75.0% 62.4%
2nooA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 40.0 2.86e-01 72.6% 30.2%
1zodA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 49.0 4.20e-01 95.2% 65.2%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.58 40.0 4.17e-01 75.0% 79.2%
2qz8A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.57 40.0 4.13e-01 76.2% 76.5%
2phcB01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 42.0 4.24e-01 78.6% 92.8%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 40.0 4.09e-01 75.0% 77.4%
1nh8A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 38.0 4.15e-01 76.2% 86.6%
2kdoA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 38.0 3.93e-01 75.0% 73.8%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 38.0 4.05e-01 76.2% 79.7%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 48.0 4.56e-01 94.0% 83.7%
1jg8A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 48.0 4.62e-01 95.2% 84.4%
3ke3A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 46.0 4.28e-01 94.0% 83.0%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.56 42.0 4.06e-01 81.0% 75.5%
2qmaA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 46.0 4.11e-01 94.0% 68.8%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 37.0 3.97e-01 76.2% 82.9%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 39.0 4.17e-01 75.0% 91.8%
6liuC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 47.0 4.26e-01 95.2% 76.7%
3mahA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 40.0 4.31e-01 82.1% 92.9%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 39.0 4.05e-01 76.2% 79.0%
2xhcA01 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.55 39.0 3.78e-01 75.0% 66.3%
4r5zA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 43.0 3.81e-01 95.2% 57.9%
1b4bA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.54 39.0 4.15e-01 82.1% 91.5%
3gdzB00 3.30.1360.70 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain 0.54 39.0 3.67e-01 77.4% 91.6%
3cjsA00 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.54 31.0 3.53e-01 75.0% 79.3%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.54 38.0 3.42e-01 75.0% 60.7%
3cq4A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 41.0 3.62e-01 94.0% 54.7%
3mggB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 3.30e-01 82.1% 87.2%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 35.0 3.34e-01 94.0% 56.0%
3lwsF02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 45.0 4.23e-01 95.2% 87.5%
4hjhA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.53 37.0 3.58e-01 76.2% 92.1%
3l4gB03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.53 37.0 3.90e-01 75.0% 90.5%
3h20A02 3.30.70.1790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain 0.52 35.0 3.36e-01 76.2% 57.3%
2g0iA00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.52 44.0 4.06e-01 95.2% 76.6%
4qmfB01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.52 37.0 3.75e-01 76.2% 80.5%
3va7A05 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.52 43.0 4.11e-01 95.2% 92.0%
7sz8A02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.51 40.0 3.86e-01 85.7% 90.5%
4g2aA01 2.60.40.3680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 43.0 3.26e-01 100.0% 61.5%
2f40A00 3.30.70.1750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF11491 family, DUF3213 0.51 33.0 3.52e-01 76.2% 77.0%
4g68A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 40.0 3.23e-01 90.5% 64.9%
1zu0A02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.50 44.0 4.10e-01 100.0% 94.4%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004123 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.70 47.0 4.94e-01 76.2% 75.6%
4959531 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.69 45.0 5.05e-01 75.0% 87.7%
4310337 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.68 42.0 4.51e-01 76.2% 74.3%
5080144 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.67 42.0 4.60e-01 76.2% 75.7%
5082818 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.67 42.0 4.53e-01 75.0% 75.7%
4327478 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.66 43.0 4.77e-01 75.0% 86.2%
4970115 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.65 41.0 4.48e-01 75.0% 77.1%
5051224 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.64 41.0 4.47e-01 75.0% 78.6%
4932614 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.64 42.0 4.53e-01 76.2% 80.0%
5049429 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.64 41.0 4.01e-01 76.2% 58.9%
4174514 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.63 57.0 4.03e-01 100.0% 82.4%
4946891 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.63 41.0 4.44e-01 76.2% 80.0%
4124687 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.63 46.0 4.80e-01 76.2% 89.3%
4994431 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.63 43.0 4.69e-01 75.0% 90.8%
5058294 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.63 41.0 4.48e-01 76.2% 81.4%
3477734 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.62 41.0 3.32e-01 76.2% 36.1%
4285092 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.62 37.0 4.15e-01 75.0% 76.9%
4973973 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.62 41.0 4.44e-01 75.0% 82.9%
4991978 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.61 39.0 4.09e-01 76.2% 72.0%
3291522 304.154.1.0 a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain 0.61 43.0 3.56e-01 76.2% 40.7%
4983133 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.61 39.0 4.20e-01 76.2% 78.3%
3283072 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.61 44.0 3.15e-01 76.2% 27.5%
3639594 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 42.0 4.71e-01 76.2% 100.0%
4964995 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.61 38.0 4.00e-01 76.2% 69.2%
4978228 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.61 42.0 4.59e-01 76.2% 92.3%
4979429 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.60 45.0 4.58e-01 81.0% 94.1%
4160926 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.60 38.0 4.03e-01 76.2% 72.0%
5044658 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 40.0 3.99e-01 76.2% 65.9%
4654074 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.60 40.0 3.97e-01 76.2% 64.4%
4980947 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 42.0 4.15e-01 75.0% 68.9%
4947074 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.60 40.0 4.31e-01 76.2% 81.4%
5063532 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.59 39.0 4.15e-01 76.2% 76.0%
2167875 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.59 39.0 4.12e-01 76.2% 77.0%
4976695 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.59 39.0 3.86e-01 76.2% 63.3%
4778785 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 42.0 4.32e-01 76.2% 77.1%
3538625 304.7.1.4 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › S8_pro-domain 0.59 43.0 4.30e-01 76.2% 83.5%
4959113 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.59 37.0 4.14e-01 75.0% 83.1%
4976207 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.59 38.0 4.13e-01 75.0% 80.0%
138898 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.59 38.0 4.32e-01 76.2% 93.2%
4168509 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.59 39.0 4.17e-01 76.2% 79.5%
4972520 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.59 39.0 4.12e-01 76.2% 78.1%
3583422 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 39.0 4.22e-01 76.2% 82.9%
1942459 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.58 34.0 3.78e-01 76.2% 73.8%
4475558 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.58 38.0 4.07e-01 76.2% 77.0%
5036839 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.58 38.0 4.16e-01 76.2% 82.6%
3948353 304.56.1.5 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › PaaX_M 0.58 36.0 3.79e-01 75.0% 69.3%
4934045 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.58 38.0 4.08e-01 75.0% 80.0%
3504994 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.58 41.0 3.95e-01 76.2% 63.6%
5012390 304.11.1.16 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › DUF2110_C 0.58 37.0 4.06e-01 75.0% 78.6%
4276027 306.6.1.2 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › FlgI 0.58 44.0 4.53e-01 92.9% 86.3%
4011265 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.58 38.0 4.15e-01 76.2% 82.9%
3721749 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.57 38.0 4.05e-01 76.2% 77.3%
3287739 304.48.1.48 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.57 40.0 3.37e-01 75.0% 40.6%
3959600 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.57 38.0 4.04e-01 76.2% 78.4%
3965593 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 41.0 4.09e-01 75.0% 80.0%
5029856 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.57 43.0 4.36e-01 82.1% 90.6%
4373580 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.57 38.0 4.00e-01 76.2% 77.3%
4469741 306.6.1.2 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › FlgI 0.56 41.0 4.30e-01 82.1% 86.7%
4970578 304.11.1.16 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › DUF2110_C 0.56 38.0 3.72e-01 75.0% 64.4%
5026872 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.56 33.0 3.58e-01 72.6% 67.1%
4062805 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.56 38.0 3.99e-01 76.2% 78.4%
3386186 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.56 35.0 3.55e-01 76.2% 62.4%
5000277 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 47.0 4.50e-01 94.0% 86.7%
4979727 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 37.0 3.76e-01 75.0% 68.2%
3202960 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.56 36.0 3.67e-01 75.0% 66.7%
5022444 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.56 37.0 3.81e-01 75.0% 72.5%
3970632 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.55 39.0 4.05e-01 75.0% 86.3%
3795358 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 39.0 4.08e-01 76.2% 84.0%
3439107 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.55 40.0 4.19e-01 76.2% 89.3%
4031720 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.55 35.0 3.45e-01 76.2% 60.0%
4429744 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.55 41.0 4.02e-01 82.1% 89.5%
4966152 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 37.0 3.85e-01 75.0% 78.7%
4946034 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.54 36.0 3.71e-01 75.0% 72.5%
5026346 1075.1.1.3 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 0.54 44.0 3.17e-01 92.9% 68.0%
3182090 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 38.0 3.96e-01 75.0% 89.3%
5071792 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.54 33.0 3.48e-01 76.2% 68.0%
5045093 304.11.1.16 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › DUF2110_C 0.54 36.0 3.76e-01 75.0% 77.3%
4945151 304.128.1.1 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB › FtsX 0.54 38.0 3.96e-01 94.0% 82.7%
4059719 304.9.1.61 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Thc1_RRM 0.53 36.0 3.74e-01 75.0% 77.3%
5071628 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.53 32.0 3.46e-01 75.0% 71.4%
2831839 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.52 37.0 3.78e-01 75.0% 83.1%
3184938 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 43.0 4.06e-01 94.0% 74.3%
3949990 7523.1.1.10 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG 0.52 37.0 3.28e-01 76.2% 95.4%
1388654 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.51 36.0 2.95e-01 75.0% 50.0%
4375033 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.51 33.0 3.62e-01 76.2% 80.0%
4052413 7577.1.1.10 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › GDC-P 0.50 41.0 2.63e-01 92.9% 17.5%