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CAKLQF020000001.1__CAH1069661.1__SAMEA5780031_00087__00082
Bact-VirCAKLQF020000001.1__CAH1069661.1__SAMEA5780031_00087__00082
Identity
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-50_122-143_185-217
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09347.16 best | DUF1989 | 39.2 | 8.30e-10 | 39.8% | 21.4% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oezA01 | 2.60.440.10 | Mainly Beta › Sandwich › YacF-like › YacF-like domains | 0.65 | 44.0 | 4.72e-01 | 95.7% | 83.3% |
| 2omkA00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.60 | 43.0 | 3.21e-01 | 95.7% | 31.5% |
| 4umsA01 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 3.96e-01 | 100.0% | 58.5% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 46.0 | 3.54e-01 | 95.7% | 70.8% |
| 4r6uA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.97e-01 | 97.8% | 79.6% |
| 2ctjA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 37.0 | 3.74e-01 | 91.4% | 75.8% |
| 2xbtA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.50 | 44.0 | 3.73e-01 | 97.8% | 62.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3284574 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.91 | 84.0 | 6.28e-01 | 94.6% | 99.5% |
| 4026220 | 3156.3.1.0 ↗ | beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family | 0.68 | 47.0 | 4.66e-01 | 100.0% | 67.0% |
| 4437403 | 4287.1.1.1 ↗ | beta sandwiches › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › ZapD | 0.60 | 43.0 | 4.70e-01 | 96.8% | 93.3% |
| 1178765 | 10.11.1.2 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › Thi_PPkinase_C | 0.60 | 43.0 | 4.89e-01 | 95.7% | 97.2% |
| 5028896 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.59 | 47.0 | 5.07e-01 | 96.8% | 97.5% |
| 3840135 | 10.11.1.2 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › Thi_PPkinase_C | 0.58 | 45.0 | 4.80e-01 | 100.0% | 96.2% |
| 3615533 | 10.12.1.25 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH | 0.58 | 51.0 | 3.83e-01 | 100.0% | 55.4% |
| 4002435 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 3.73e-01 | 100.0% | 49.7% |
| 3393328 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 50.0 | 4.63e-01 | 98.9% | 91.3% |
| 4954923 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 49.0 | 4.44e-01 | 100.0% | 83.2% |
| 5067925 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 45.0 | 4.34e-01 | 95.7% | 98.2% |
| 4029630 | 10.30.1.1 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin | 0.52 | 46.0 | 4.69e-01 | 100.0% | 100.0% |
| 3436181 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.52 | 43.0 | 3.46e-01 | 91.4% | 46.7% |
| 3249969 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 46.0 | 4.18e-01 | 98.9% | 78.4% |
| 3226140 | 10.30.1.1 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin | 0.51 | 46.0 | 4.11e-01 | 100.0% | 87.7% |
| 3507465 | 10.30.1.0 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain | 0.51 | 44.0 | 4.39e-01 | 96.8% | 92.6% |
| 3913748 | 10.30.1.1 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin | 0.51 | 45.0 | 4.39e-01 | 96.8% | 94.0% |
| 3508351 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 44.0 | 3.78e-01 | 96.8% | 81.3% |
| 3639075 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 43.0 | 4.02e-01 | 93.5% | 81.7% |
| 4868011 | 10.30.1.1 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin | 0.50 | 43.0 | 4.17e-01 | 96.8% | 88.0% |
D2
medium
residues 51-121_144-184
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09347.16 best | DUF1989 | 130.3 | 7.90e-38 | 100.0% | 76.8% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mm0A00 | 2.10.70.110 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.53 | 25.0 | 3.06e-01 | 99.1% | 71.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3284574 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.99 | 97.0 | 7.69e-01 | 100.0% | 65.6% |
| 3731298 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.91 | 87.0 | 6.60e-01 | 100.0% | 68.3% |
| 3722404 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.91 | 87.0 | 6.28e-01 | 100.0% | 51.5% |
| 146303 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.90 | 86.0 | 6.52e-01 | 100.0% | 55.0% |
| 4985583 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.86 | 79.0 | 6.65e-01 | 96.4% | 66.3% |
| 3730134 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.86 | 82.0 | 6.56e-01 | 100.0% | 64.0% |
| 3285966 | 10.22.1.1 ↗ | beta sandwiches › jelly-roll › DUF1989 family protein › DUF1989 family protein › DUF1989 | 0.82 | 78.0 | 6.02e-01 | 100.0% | 50.5% |