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CAKLQF020000001.1__CAH1069685.1__SAMEA5780031_00099__00094
Bact-VirCAKLQF020000001.1__CAH1069685.1__SAMEA5780031_00099__00094
Identity
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-199
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kwmA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.63 | 28.0 | 4.09e-01 | 73.1% | 92.0% |
| 3m4xA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.61 | 22.0 | 3.19e-01 | 73.1% | 68.2% |
| 2cqpA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 28.0 | 3.78e-01 | 80.3% | 85.7% |
| 2rvjA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 31.0 | 4.09e-01 | 71.5% | 96.9% |
| 5w0hA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 27.0 | 3.83e-01 | 73.6% | 100.0% |
| 1nbeB01 | 3.30.70.140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain | 0.58 | 27.0 | 3.79e-01 | 75.6% | 91.4% |
| 2dnzA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 27.0 | 3.75e-01 | 79.8% | 90.3% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 27.0 | 3.84e-01 | 73.1% | 100.0% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 28.0 | 3.82e-01 | 81.9% | 96.8% |
| 2ca9A02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.55 | 27.0 | 3.77e-01 | 77.7% | 98.9% |
| 1p1tA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 29.0 | 3.73e-01 | 72.5% | 91.3% |
| 2dnhA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 29.0 | 3.80e-01 | 86.5% | 94.3% |
| 7as8L01 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.53 | 27.0 | 3.45e-01 | 79.3% | 82.1% |
| 2cq4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 26.0 | 3.53e-01 | 81.9% | 90.7% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 26.0 | 3.65e-01 | 80.8% | 100.0% |
| 1s79A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 27.0 | 3.47e-01 | 81.9% | 87.4% |
| 2cjkA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 24.0 | 3.42e-01 | 71.0% | 100.0% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.50 | 32.0 | 3.75e-01 | 92.2% | 91.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024196 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 29.0 | 4.04e-01 | 75.1% | 100.0% |
| 3929704 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 30.0 | 3.95e-01 | 85.0% | 93.0% |
| 5056500 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 27.0 | 3.93e-01 | 79.8% | 98.8% |
| 4234397 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 29.0 | 3.88e-01 | 86.5% | 92.0% |
| 3394912 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 26.0 | 3.70e-01 | 74.1% | 92.9% |
| 3623982 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 33.0 | 3.90e-01 | 100.0% | 84.0% |
| 4468514 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 26.0 | 3.82e-01 | 75.1% | 100.0% |
| 4460422 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.57 | 25.0 | 3.74e-01 | 72.0% | 97.5% |
| 3837951 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.57 | 27.0 | 3.82e-01 | 78.2% | 95.6% |
| 3200784 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 30.0 | 3.83e-01 | 84.5% | 87.3% |
| 3556460 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 29.0 | 3.73e-01 | 82.4% | 85.5% |
| 4994637 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 26.0 | 3.47e-01 | 75.1% | 82.0% |
| 3164917 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.56 | 25.0 | 3.66e-01 | 73.1% | 97.5% |
| 4594531 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 26.0 | 3.63e-01 | 73.6% | 92.1% |
| 4976260 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 26.0 | 3.69e-01 | 74.1% | 96.5% |
| 5026422 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 25.0 | 3.20e-01 | 75.1% | 70.4% |
| 5031989 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 25.0 | 3.68e-01 | 74.1% | 97.6% |
| 3837629 | 304.11.1.9 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › MBTP1_N | 0.53 | 24.0 | 3.36e-01 | 74.1% | 86.7% |
| 3808450 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 28.0 | 3.71e-01 | 76.7% | 97.0% |
| 4959099 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 23.0 | 3.42e-01 | 73.1% | 96.2% |
| 3187734 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 26.0 | 3.63e-01 | 74.6% | 100.0% |
| 4167767 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.51 | 29.0 | 2.98e-01 | 78.8% | 55.7% |
| 4996950 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.51 | 33.0 | 3.92e-01 | 90.2% | 96.9% |
| 3612289 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.50 | 26.0 | 3.07e-01 | 82.9% | 70.8% |
| 3436181 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.50 | 30.0 | 3.11e-01 | 79.3% | 60.6% |
| 5278 | 304.13.1.1 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB | 0.50 | 32.0 | 3.75e-01 | 92.2% | 91.7% |
| 4510400 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.50 | 29.0 | 3.13e-01 | 78.8% | 64.2% |
D2
medium
residues 202-311
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7y11B01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.65 | 38.0 | 4.66e-01 | 100.0% | 98.4% |
| 1jfaB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 54.0 | 3.78e-01 | 99.1% | 60.6% |
| 7e4nA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 51.0 | 3.85e-01 | 100.0% | 77.9% |
| 153lA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.57 | 47.0 | 3.99e-01 | 90.0% | 89.2% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.56 | 43.0 | 4.39e-01 | 81.8% | 82.7% |
| 4okmD00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 50.0 | 3.59e-01 | 99.1% | 66.9% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 36.0 | 3.91e-01 | 89.1% | 84.0% |
| 1kxpD02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.52 | 31.0 | 3.42e-01 | 93.6% | 72.7% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 40.0 | 4.06e-01 | 81.8% | 85.8% |
| 3nrgA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 46.0 | 3.71e-01 | 100.0% | 69.6% |
| 4bemJ00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.51 | 39.0 | 3.30e-01 | 80.0% | 91.2% |
| 1gq2A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 43.0 | 3.15e-01 | 93.6% | 36.3% |
| 3fz5B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 35.0 | 3.01e-01 | 71.8% | 65.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3803646 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.69 | 41.0 | 5.10e-01 | 90.9% | 100.0% |
| 4003682 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 44.0 | 5.05e-01 | 71.8% | 98.7% |
| 3490219 | 101.1.1.227 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_NOL4_2nd | 0.60 | 35.0 | 3.66e-01 | 92.7% | 61.9% |
| 3377590 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.55 | 41.0 | 4.12e-01 | 84.5% | 76.5% |
| 4604080 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.53 | 31.0 | 3.71e-01 | 90.0% | 96.9% |
| 4025107 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.50 | 39.0 | 4.01e-01 | 100.0% | 86.7% |
| 1145724 | 601.21.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Baculo_p33 | 0.50 | 33.0 | 3.47e-01 | 84.5% | 71.8% |
| 4938672 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.50 | 31.0 | 3.79e-01 | 93.6% | 98.6% |