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CAKLQF020000001.1__CAH1069735.1__SAMEA5780031_00124__00119
Bact-VirCAKLQF020000001.1__CAH1069735.1__SAMEA5780031_00124__00119
Identity
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 163-312
Domain cluster:
rep: NC_023549.1__YP_009004248.1__CN1A_36__00036__D3-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13539.12 best | Peptidase_M15_4 | 58.5 | 1.10e-15 | 45.3% | 98.5% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vo9A01 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.84 | 65.0 | 6.94e-01 | 79.3% | 93.2% |
| 4mphA00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.78 | 62.0 | 5.79e-01 | 82.0% | 69.1% |
| 5hnmC00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.78 | 61.0 | 5.69e-01 | 80.7% | 76.4% |
| 4d0yA00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.77 | 58.0 | 5.39e-01 | 78.0% | 67.9% |
| 4muqA02 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.76 | 58.0 | 5.87e-01 | 78.7% | 89.0% |
| 1tzpB00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.69 | 60.0 | 5.08e-01 | 91.3% | 81.4% |
| 3qdlA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.62 | 47.0 | 4.49e-01 | 79.3% | 75.3% |
| 3gygC02 | 3.30.70.1410 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › yhjk (haloacid dehalogenase-like hydrolase protein) domain | 0.62 | 33.0 | 4.53e-01 | 74.0% | 100.0% |
| 1vkwA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.62 | 37.0 | 4.11e-01 | 76.7% | 73.6% |
| 3e39A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 47.0 | 4.46e-01 | 79.3% | 74.9% |
| 3k6hA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 46.0 | 4.50e-01 | 78.7% | 87.4% |
| 3hj4A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 41.0 | 4.39e-01 | 81.3% | 77.9% |
| 4g6vB00 | 3.30.70.2920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 37.0 | 4.35e-01 | 73.3% | 88.3% |
| 3e10A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 45.0 | 4.36e-01 | 79.3% | 78.9% |
| 4ritA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.58 | 33.0 | 2.88e-01 | 78.0% | 35.6% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.57 | 32.0 | 3.34e-01 | 86.0% | 57.4% |
| 2g0iA00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.56 | 34.0 | 3.84e-01 | 87.3% | 78.4% |
| 2ipiA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.51 | 38.0 | 3.28e-01 | 77.3% | 81.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.79 | 67.0 | 6.80e-01 | 89.3% | 89.9% | |
| 3256406 | 307.1.1.2 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15 | 0.78 | 72.0 | 6.32e-01 | 97.3% | 97.6% |
| 2448156 | 307.1.1.6 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_4 | 0.77 | 67.0 | 6.73e-01 | 91.3% | 90.7% |
| 1497958 | 307.1.1.11 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › PF31190 | 0.67 | 52.0 | 5.41e-01 | 80.0% | 94.9% |
| 168722 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.61 | 47.0 | 4.46e-01 | 79.3% | 74.9% |
| 4442452 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.60 | 46.0 | 4.36e-01 | 79.3% | 74.9% |
| 4927017 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.60 | 46.0 | 4.43e-01 | 79.3% | 78.1% |
| 4307364 | 878.1.1.6 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › PF29774 | 0.58 | 43.0 | 4.79e-01 | 77.3% | 99.2% |
| 4016349 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.55 | 41.0 | 3.30e-01 | 78.0% | 69.4% |
| 3574611 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 38.0 | 2.67e-01 | 72.7% | 40.5% |