Back to structures

CAKLQF020000001.1__CAH1069963.1__SAMEA5780031_00229__00223

Bact-Vir

CAKLQF020000001.1__CAH1069963.1__SAMEA5780031_00229__00223

Identity

Kingdom:
phage

Quality

86.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 103-131_268-428
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19577.5 best DcaP 100.1 2.10e-28 90.5% 37.8%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.81 59.0 4.42e-01 84.7% 33.6%
3fhhA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.77 63.0 4.51e-01 84.7% 36.4%
3cslA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.76 63.0 4.23e-01 84.7% 45.9%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.75 61.0 4.56e-01 84.7% 40.4%
5fokA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.74 61.0 4.23e-01 84.7% 42.5%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.73 68.0 5.13e-01 97.4% 90.8%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.69 65.0 4.58e-01 100.0% 95.8%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.69 65.0 4.62e-01 100.0% 97.3%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.68 65.0 4.35e-01 98.9% 63.2%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.68 62.0 4.79e-01 97.4% 97.0%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.68 41.0 4.56e-01 70.0% 74.2%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.67 61.0 4.60e-01 97.4% 89.0%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 63.0 4.27e-01 98.9% 72.5%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 63.0 4.47e-01 100.0% 97.4%
1bt9A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.67 64.0 5.12e-01 100.0% 93.2%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.66 60.0 4.59e-01 97.4% 87.4%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.66 62.0 4.74e-01 100.0% 96.4%
8p97A01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 60.0 4.14e-01 97.4% 83.1%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.65 61.0 4.78e-01 98.9% 88.5%
3v89A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.64 60.0 4.11e-01 98.4% 83.8%
1lshA04 2.20.80.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex, chain A, domain 4 › Lipovitellin-phosvitin complex, chain A, domain 4 0.64 45.0 4.05e-01 70.5% 89.2%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.62 58.0 5.20e-01 97.9% 94.0%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.62 50.0 3.98e-01 84.7% 60.2%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 54.0 4.57e-01 97.9% 59.5%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.60 56.0 4.67e-01 98.4% 86.6%
3bryA00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.60 55.0 4.32e-01 97.4% 87.7%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.60 57.0 4.74e-01 97.9% 80.9%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 54.0 4.58e-01 96.8% 76.6%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.59 56.0 4.76e-01 98.9% 86.5%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.59 55.0 5.41e-01 100.0% 95.1%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.58 53.0 4.99e-01 96.8% 96.9%
4c4vB02 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.57 52.0 4.13e-01 97.4% 96.7%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.57 53.0 4.78e-01 98.9% 81.3%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.57 51.0 4.54e-01 96.8% 79.2%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.56 51.0 4.46e-01 96.3% 70.6%
1gr0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 24.0 3.65e-01 95.8% 94.0%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.55 51.0 4.39e-01 97.4% 97.6%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.55 40.0 4.35e-01 95.8% 91.0%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.54 50.0 4.29e-01 99.5% 97.3%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.54 39.0 4.39e-01 97.4% 94.6%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.53 49.0 4.52e-01 97.9% 83.5%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.53 43.0 3.49e-01 84.7% 56.2%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 27.0 3.48e-01 78.9% 86.2%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.52 49.0 4.39e-01 99.5% 88.4%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2410570 5084.5.1.14 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DcaP 0.92 91.0 7.08e-01 100.0% 92.5%
1760521 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.77 63.0 4.51e-01 84.7% 36.5%
3965708 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.76 54.0 4.90e-01 77.4% 56.2%
3970016 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.75 71.0 5.46e-01 97.4% 92.1%
3966904 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.74 60.0 4.00e-01 83.7% 31.3%
4880357 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.74 43.0 5.08e-01 74.7% 81.3%
3839274 5084.5.1.25 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 0.74 69.0 4.89e-01 97.4% 95.8%
3405242 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.73 49.0 5.02e-01 84.7% 69.9%
1760802 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.72 59.0 4.28e-01 84.2% 42.9%
4339977 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.71 67.0 5.13e-01 97.4% 94.5%
4522601 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.70 64.0 5.08e-01 96.3% 93.6%
4440914 5084.5.3.0 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.69 65.0 4.30e-01 97.9% 52.7%
4527549 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.69 64.0 5.10e-01 96.3% 93.9%
3838130 5084.5.1.25 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 0.69 64.0 4.69e-01 97.4% 95.6%
3968681 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.69 63.0 4.78e-01 97.4% 93.2%
3970527 5084.5.1.6 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB 0.69 66.0 4.92e-01 100.0% 90.1%
4025861 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.69 41.0 4.33e-01 70.5% 65.3%
4593791 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.69 56.0 4.48e-01 84.7% 76.9%
4873102 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.69 39.0 4.68e-01 97.9% 81.5%
4416793 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.68 64.0 4.85e-01 98.4% 86.7%
3165307 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.68 62.0 4.66e-01 96.8% 84.8%
3973062 5084.5.4.0 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein 0.68 62.0 4.78e-01 96.8% 85.0%
3964119 5084.5.3.0 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.67 63.0 4.86e-01 97.9% 87.0%
4219386 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.67 64.0 5.02e-01 100.0% 91.8%
3966027 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.67 61.0 4.60e-01 97.4% 89.2%
4208285 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.67 62.0 5.40e-01 96.8% 83.3%
4255354 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.67 64.0 4.83e-01 100.0% 86.1%
3257282 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.67 60.0 4.96e-01 94.2% 70.3%
4066147 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.67 64.0 5.18e-01 100.0% 93.1%
4582939 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.67 62.0 5.12e-01 98.9% 97.8%
3839269 5084.5.3.0 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.66 61.0 4.13e-01 97.9% 88.7%
4604561 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.66 62.0 4.80e-01 97.4% 79.2%
2321077 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.65 61.0 4.99e-01 97.4% 93.8%
4055728 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.65 60.0 4.86e-01 97.4% 87.1%
4513489 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.65 60.0 4.81e-01 98.4% 84.7%
3971028 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.64 58.0 4.25e-01 97.4% 90.1%
1760440 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.64 60.0 4.33e-01 100.0% 97.6%
4458963 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.64 60.0 4.76e-01 98.4% 79.0%
3332730 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.63 57.0 4.53e-01 96.8% 95.1%
3967063 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.62 57.0 4.89e-01 96.8% 85.9%
3964794 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.61 56.0 5.18e-01 97.9% 91.3%
4669999 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 55.0 4.63e-01 95.8% 84.2%
1568816 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.60 56.0 4.94e-01 98.4% 78.7%
3515197 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.60 37.0 3.91e-01 71.6% 67.1%
4006163 5084.5.4.13 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG 0.60 55.0 4.68e-01 96.8% 90.2%
3387368 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 55.0 4.90e-01 98.9% 80.3%
3387574 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.59 55.0 4.61e-01 98.9% 95.8%
4234836 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.59 55.0 4.62e-01 98.9% 83.0%
3164124 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.59 37.0 4.50e-01 72.6% 97.5%
5034787 5084.5.3.17 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › DUF5916 0.59 54.0 4.01e-01 97.9% 56.9%
4005087 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.58 55.0 5.13e-01 100.0% 88.0%
3838722 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.58 54.0 4.52e-01 99.5% 92.7%
4345340 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 54.0 4.54e-01 98.9% 69.1%
3969607 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.57 53.0 4.42e-01 98.4% 82.2%
4547630 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 54.0 4.58e-01 98.9% 68.6%
3977722 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.57 53.0 5.17e-01 100.0% 94.8%
None 0.56 51.0 4.71e-01 95.8% 91.2%
4683047 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.55 43.0 4.60e-01 95.8% 92.1%
4417262 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.55 43.0 4.60e-01 95.8% 91.6%
139764 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.55 49.0 4.37e-01 96.3% 70.6%
2410295 5084.5.4.3 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › PorV 0.55 51.0 4.79e-01 98.9% 95.6%
3975352 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.54 40.0 4.42e-01 97.4% 94.1%
None 0.54 39.0 4.39e-01 97.4% 94.6%
4265077 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.53 41.0 4.50e-01 97.4% 95.0%
4099548 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.52 38.0 4.24e-01 96.8% 94.7%
4224449 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.52 42.0 4.42e-01 96.8% 92.5%
4537321 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.52 41.0 4.24e-01 97.4% 87.2%
4305692 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.51 41.0 4.39e-01 97.4% 95.3%
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.50 37.0 3.96e-01 95.8% 85.9%