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CAKLQF020000001.1__CAH1070146.1__SAMEA5780031_00309__00302
Bact-VirCAKLQF020000001.1__CAH1070146.1__SAMEA5780031_00309__00302
Identity
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-62_495-566
Domain cluster:
rep: MK524177.1__QBJ00764.1__X__00038__D18-72_370-424
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hm7B01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.86 | 54.0 | 6.80e-01 | 79.9% | 100.0% |
| 2vhlB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.86 | 58.0 | 7.00e-01 | 79.9% | 100.0% |
| 3ooqF01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.85 | 59.0 | 7.04e-01 | 78.4% | 100.0% |
| 2gokA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.85 | 62.0 | 6.99e-01 | 74.6% | 100.0% |
| 1rk6A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.85 | 54.0 | 6.76e-01 | 82.1% | 100.0% |
| 2bb0A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.84 | 64.0 | 6.88e-01 | 77.6% | 100.0% |
| 1nfgB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.84 | 46.0 | 5.72e-01 | 82.8% | 83.9% |
| 4ub9A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.84 | 59.0 | 6.84e-01 | 73.1% | 96.0% |
| 1kcxA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.84 | 47.0 | 5.38e-01 | 82.8% | 72.8% |
| 3be7A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.82 | 59.0 | 6.84e-01 | 77.6% | 100.0% |
| 2p9bA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.81 | 59.0 | 6.73e-01 | 94.0% | 97.1% |
| 2ftyA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.81 | 56.0 | 6.70e-01 | 84.3% | 100.0% |
| 2oodA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.81 | 61.0 | 5.99e-01 | 76.9% | 100.0% |
| 1yrrA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.81 | 54.0 | 6.59e-01 | 75.4% | 100.0% |
| 3mtwA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.80 | 59.0 | 6.78e-01 | 78.4% | 100.0% |
| 4cqbA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.80 | 59.0 | 6.75e-01 | 84.3% | 100.0% |
| 2gwnA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.80 | 56.0 | 6.55e-01 | 82.8% | 98.0% |
| 3ggmA00 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.80 | 44.0 | 6.04e-01 | 100.0% | 100.0% |
| 3hpaA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.79 | 63.0 | 6.74e-01 | 82.1% | 100.0% |
| 2qs8A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.79 | 57.0 | 6.63e-01 | 75.4% | 100.0% |
| 6jkuA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.79 | 54.0 | 6.33e-01 | 76.1% | 94.9% |
| 4c65B01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.79 | 63.0 | 6.81e-01 | 84.3% | 95.7% |
| 2i9uA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.79 | 57.0 | 6.27e-01 | 74.6% | 100.0% |
| 3mkvA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.78 | 60.0 | 6.74e-01 | 79.9% | 100.0% |
| 4m51A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.78 | 55.0 | 6.28e-01 | 72.4% | 100.0% |
| 2q09A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.78 | 58.0 | 6.62e-01 | 81.3% | 100.0% |
| 1xrtB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.77 | 57.0 | 6.27e-01 | 76.1% | 99.1% |
| 2pajA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.77 | 60.0 | 6.40e-01 | 80.6% | 100.0% |
| 1onwA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.77 | 59.0 | 6.54e-01 | 86.6% | 97.3% |
| 2vunA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.76 | 65.0 | 6.73e-01 | 98.5% | 93.7% |
| 3nqbA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.76 | 57.0 | 6.12e-01 | 76.9% | 90.5% |
| 3griB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.75 | 55.0 | 6.08e-01 | 74.6% | 100.0% |
| 1p1mA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.75 | 56.0 | 6.37e-01 | 79.9% | 100.0% |
| 4dzhA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.75 | 66.0 | 6.57e-01 | 92.5% | 93.4% |
| 3lnpA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.74 | 65.0 | 6.55e-01 | 91.8% | 94.0% |
| 1e9yB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.74 | 61.0 | 5.39e-01 | 85.8% | 67.4% |
| 4f0lB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.73 | 55.0 | 6.15e-01 | 76.9% | 100.0% |
| 1gkpB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.72 | 57.0 | 5.87e-01 | 82.1% | 89.1% |
| 1gkrB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.71 | 58.0 | 5.91e-01 | 84.3% | 93.8% |
| 2ogjA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.67 | 55.0 | 5.97e-01 | 94.0% | 100.0% |
| 4f87B00 | 3.30.720.190 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.62 | 29.0 | 4.04e-01 | 73.9% | 95.2% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4998524 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.95 | 71.0 | 4.54e-01 | 76.9% | 100.0% |
| 3974670 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.94 | 66.0 | 7.87e-01 | 82.8% | 100.0% |
| 5040391 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.94 | 68.0 | 7.98e-01 | 76.1% | 100.0% |
| 5055200 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.94 | 62.0 | 7.61e-01 | 80.6% | 100.0% |
| 4235128 | 65.1.1.10 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_3 | 0.92 | 70.0 | 7.61e-01 | 77.6% | 100.0% |
| 4945927 | 65.1.1.10 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_3 | 0.91 | 63.0 | 7.54e-01 | 76.1% | 100.0% |
| 3345215 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.89 | 58.0 | 7.19e-01 | 76.9% | 100.0% |
| 4373172 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.87 | 65.0 | 7.06e-01 | 76.9% | 100.0% |
| 4962415 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.86 | 61.0 | 6.86e-01 | 71.6% | 100.0% |
| 4179866 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.86 | 54.0 | 6.10e-01 | 85.8% | 81.0% |
| 4461300 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.85 | 60.0 | 6.96e-01 | 72.4% | 100.0% |
| 5045162 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.85 | 50.0 | 6.52e-01 | 74.6% | 100.0% |
| 4157921 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.84 | 63.0 | 6.81e-01 | 76.9% | 97.4% |
| 3286405 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.83 | 61.0 | 6.51e-01 | 75.4% | 100.0% |
| 5043729 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.83 | 52.0 | 6.50e-01 | 80.6% | 98.8% |
| 5076745 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.83 | 58.0 | 6.67e-01 | 85.1% | 95.0% |
| 4954999 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.82 | 66.0 | 7.27e-01 | 82.8% | 100.0% |
| 4945057 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.82 | 55.0 | 6.22e-01 | 87.3% | 86.7% |
| 4146293 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.82 | 59.0 | 6.40e-01 | 85.8% | 86.1% |
| 3971540 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.82 | 62.0 | 4.21e-01 | 78.4% | 100.0% |
| 4460305 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.82 | 63.0 | 6.55e-01 | 85.8% | 84.8% |
| 4510980 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.82 | 67.0 | 7.21e-01 | 97.8% | 98.3% |
| 4191265 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.81 | 59.0 | 6.63e-01 | 73.9% | 100.0% |
| 4552288 | 65.1.1.1 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Urease_alpha | 0.81 | 59.0 | 6.34e-01 | 85.1% | 86.1% |
| 1003725 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.81 | 44.0 | 6.08e-01 | 95.5% | 100.0% |
| 4056729 | 65.1.1.4 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › HUTI_composite_bact | 0.81 | 64.0 | 7.10e-01 | 95.5% | 100.0% |
| 5001104 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.81 | 65.0 | 6.93e-01 | 83.6% | 100.0% |
| 5068458 | 65.1.1.4 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › HUTI_composite_bact | 0.81 | 67.0 | 6.96e-01 | 85.8% | 100.0% |
| 4634418 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.81 | 61.0 | 6.84e-01 | 77.6% | 100.0% |
| 4232734 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.80 | 58.0 | 6.76e-01 | 77.6% | 100.0% |
| 3720850 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.80 | 51.0 | 6.21e-01 | 76.9% | 97.7% |
| 4505329 | 65.1.1.4 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › HUTI_composite_bact | 0.80 | 60.0 | 6.55e-01 | 76.9% | 94.5% |
| 4583087 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.80 | 59.0 | 6.38e-01 | 85.8% | 88.7% |
| 3720932 | 65.1.1.3 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_1 | 0.80 | 61.0 | 6.78e-01 | 82.8% | 98.1% |
| 4247149 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.79 | 57.0 | 6.26e-01 | 85.8% | 89.1% |
| 3965927 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.78 | 66.0 | 4.48e-01 | 88.1% | 98.4% |
| 3242526 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.77 | 50.0 | 6.12e-01 | 75.4% | 97.8% |
| 4039118 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.77 | 59.0 | 6.39e-01 | 85.8% | 92.2% |
| 4417357 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.77 | 52.0 | 5.98e-01 | 85.8% | 92.0% |
| 3989912 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.77 | 64.0 | 4.35e-01 | 86.6% | 99.8% |
| 4058381 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.76 | 50.0 | 6.04e-01 | 76.1% | 100.0% |
| 4107596 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.76 | 62.0 | 4.38e-01 | 84.3% | 98.1% |
| 3975471 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.76 | 57.0 | 3.98e-01 | 76.9% | 99.7% |
| 5079095 | 65.1.1.4 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › HUTI_composite_bact | 0.76 | 60.0 | 6.64e-01 | 82.8% | 100.0% |
| 3468152 | 65.1.1.4 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › HUTI_composite_bact | 0.76 | 60.0 | 6.38e-01 | 82.1% | 91.7% |
| 4339361 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.75 | 56.0 | 6.22e-01 | 76.1% | 98.1% |
| 4072976 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.75 | 57.0 | 3.85e-01 | 77.6% | 100.0% |
| 3734670 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.75 | 51.0 | 6.12e-01 | 74.6% | 100.0% |
| 3960112 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.75 | 37.0 | 5.08e-01 | 85.8% | 92.9% |
| 3186762 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.75 | 53.0 | 6.20e-01 | 79.1% | 99.0% |
| 4339601 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.74 | 60.0 | 4.22e-01 | 83.6% | 96.7% |
| 3949143 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.74 | 58.0 | 6.21e-01 | 84.3% | 93.9% |
| 4680473 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.74 | 61.0 | 6.54e-01 | 85.8% | 100.0% |
| 4962242 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.74 | 58.0 | 6.15e-01 | 83.6% | 90.8% |
| 5075104 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.73 | 61.0 | 6.24e-01 | 85.8% | 93.8% |
| 3957831 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.73 | 60.0 | 6.13e-01 | 85.1% | 93.1% |
| 4008748 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.72 | 56.0 | 6.03e-01 | 80.6% | 95.7% |
| 4126201 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.72 | 59.0 | 4.21e-01 | 85.1% | 98.3% |
| 3279996 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.71 | 59.0 | 5.84e-01 | 85.8% | 90.7% |
| 4508877 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.71 | 50.0 | 5.84e-01 | 83.6% | 100.0% |
| 4084800 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.71 | 57.0 | 4.07e-01 | 82.8% | 97.1% |
| 4972798 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.71 | 58.0 | 3.99e-01 | 84.3% | 96.5% |
| 4574939 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.71 | 57.0 | 4.12e-01 | 83.6% | 100.0% |
| 4401922 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.70 | 59.0 | 4.14e-01 | 88.1% | 91.7% |
| 4468060 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.70 | 58.0 | 4.09e-01 | 85.8% | 95.9% |
| 3497222 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.70 | 53.0 | 5.51e-01 | 78.4% | 96.0% |
| 4219958 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.67 | 53.0 | 3.78e-01 | 82.8% | 96.4% |
| 3695206 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.61 | 47.0 | 3.27e-01 | 80.6% | 100.0% |
| 3661265 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.61 | 42.0 | 4.28e-01 | 70.1% | 93.8% |
| 3942002 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.59 | 51.0 | 3.27e-01 | 88.8% | 100.0% |
D2
medium
residues 63-259
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07969.18 best | Amidohydro_3 | 188.9 | 3.70e-55 | 100.0% | 40.9% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p9bA02 | 3.30.110.90 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Amidohydrolase | 0.74 | 24.0 | 3.73e-01 | 100.0% | 68.6% |
| 4rxmA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 32.0 | 3.80e-01 | 70.6% | 78.3% |
| 4rweA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 31.0 | 3.75e-01 | 70.1% | 82.0% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 31.0 | 3.50e-01 | 100.0% | 72.3% |
| 3bf0C01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 38.0 | 3.81e-01 | 72.6% | 98.0% |
| 3tevB00 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.53 | 37.0 | 3.17e-01 | 71.1% | 95.2% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973619 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 99.0 | 6.91e-01 | 100.0% | 39.0% |
| 3942002 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 1.00 | 99.0 | 6.91e-01 | 100.0% | 39.0% |
| 3980730 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.92 | 87.0 | 6.27e-01 | 100.0% | 40.2% |
| 5000257 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.83 | 68.0 | 5.02e-01 | 100.0% | 35.4% |
| 5051098 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.82 | 77.0 | 5.76e-01 | 99.0% | 43.8% |
| 3829748 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.82 | 78.0 | 5.70e-01 | 100.0% | 41.0% |
| 3431489 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.82 | 78.0 | 5.71e-01 | 100.0% | 41.5% |
| 3283274 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.82 | 74.0 | 5.44e-01 | 100.0% | 39.2% |
| 4996929 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.81 | 69.0 | 5.12e-01 | 91.9% | 38.1% |
| 5063863 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.80 | 73.0 | 5.51e-01 | 100.0% | 43.0% |
| 3960764 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.80 | 71.0 | 5.26e-01 | 94.4% | 39.4% |
| 3179537 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.80 | 75.0 | 5.39e-01 | 100.0% | 44.2% |
| 4417853 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.79 | 73.0 | 5.60e-01 | 99.0% | 45.7% |
| 4945928 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.79 | 69.0 | 5.29e-01 | 100.0% | 42.9% |
| 3288761 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.79 | 68.0 | 5.26e-01 | 100.0% | 43.4% |
| 3281683 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.79 | 73.0 | 5.33e-01 | 100.0% | 39.3% |
| 5044846 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.78 | 68.0 | 5.09e-01 | 100.0% | 39.8% |
| 3178858 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.78 | 72.0 | 5.25e-01 | 100.0% | 38.9% |
| 3952876 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.78 | 73.0 | 5.41e-01 | 100.0% | 98.5% |
| 3945234 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.77 | 72.0 | 5.30e-01 | 100.0% | 41.0% |
| 3958508 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.77 | 72.0 | 5.32e-01 | 99.0% | 98.3% |
| 3338882 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.77 | 68.0 | 6.11e-01 | 98.5% | 68.7% |
| 3969053 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.77 | 73.0 | 5.40e-01 | 100.0% | 45.4% |
| 5055201 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.76 | 66.0 | 5.09e-01 | 100.0% | 42.8% |
| 3697279 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.76 | 69.0 | 5.13e-01 | 100.0% | 40.0% |
| 4022527 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.76 | 71.0 | 5.33e-01 | 100.0% | 43.5% |
| 3693708 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.75 | 67.0 | 5.01e-01 | 100.0% | 39.8% |
| 4998524 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.75 | 69.0 | 4.95e-01 | 100.0% | 36.1% |
| 5043730 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.75 | 59.0 | 4.66e-01 | 100.0% | 41.5% |
| 3599289 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 67.0 | 4.94e-01 | 98.5% | 39.8% |
| 3686607 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.71 | 65.0 | 4.87e-01 | 99.0% | 99.6% |
| 5040392 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.71 | 66.0 | 5.15e-01 | 100.0% | 98.0% |
| 3948121 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.69 | 57.0 | 4.32e-01 | 100.0% | 37.2% |
| 4054666 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.67 | 63.0 | 5.00e-01 | 100.0% | 99.5% |
| 4954998 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.64 | 60.0 | 4.83e-01 | 98.5% | 99.2% |
| 4995648 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.64 | 59.0 | 4.52e-01 | 99.0% | 90.8% |
| 4979175 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 53.0 | 4.01e-01 | 93.4% | 46.5% |
| 3658162 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.57 | 29.0 | 3.59e-01 | 99.0% | 76.0% |
| 3311789 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.57 | 29.0 | 3.90e-01 | 99.0% | 89.9% |
| 3294275 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.56 | 29.0 | 3.53e-01 | 98.5% | 74.6% |
| 1949795 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.56 | 28.0 | 3.98e-01 | 98.5% | 100.0% |
| 439020 | 2484.1.1.75 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L5e | 0.55 | 27.0 | 3.52e-01 | 99.0% | 82.3% |
| 3712731 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.50 | 29.0 | 3.38e-01 | 94.4% | 77.9% |
D3
medium
residues 302-366
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 33.0 | 3.68e-01 | 98.5% | 61.5% |
| 2qtlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.63 | 54.0 | 4.19e-01 | 100.0% | 89.7% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.60 | 37.0 | 4.07e-01 | 96.9% | 76.5% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.58 | 43.0 | 3.59e-01 | 80.0% | 85.7% |
| 1r3bA01 | 1.20.140.30 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator | 0.58 | 47.0 | 3.54e-01 | 93.8% | 96.0% |
| 4dvgB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 46.0 | 3.05e-01 | 93.8% | 47.2% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 39.0 | 3.92e-01 | 96.9% | 69.1% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 44.0 | 2.81e-01 | 93.8% | 30.0% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 38.0 | 3.84e-01 | 73.8% | 100.0% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.55 | 39.0 | 3.59e-01 | 75.4% | 86.2% |
| 5dxfB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 44.0 | 3.11e-01 | 100.0% | 42.5% |
| 3h6pC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 29.0 | 3.13e-01 | 96.9% | 58.9% |
| 3obfA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 39.0 | 2.87e-01 | 76.9% | 81.2% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.54 | 32.0 | 3.22e-01 | 100.0% | 56.7% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 40.0 | 3.18e-01 | 96.9% | 39.7% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.51 | 31.0 | 2.49e-01 | 96.9% | 27.4% |
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 37.0 | 2.44e-01 | 78.5% | 32.2% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.51 | 40.0 | 3.24e-01 | 87.7% | 88.5% |
| 2y1vA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 3.14e-01 | 98.5% | 38.4% |
| 1ungE00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 41.0 | 3.26e-01 | 95.4% | 61.2% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973619 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 97.0 | 5.53e-01 | 100.0% | 13.3% |
| 3942002 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 1.00 | 97.0 | 5.53e-01 | 100.0% | 13.3% |
| 4969421 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.71 | 50.0 | 3.53e-01 | 75.4% | 27.9% |
| 1837963 | 1038.1.1.2 ↗ | alpha complex topology › Pre-mRNA-splicing factor 8 N-terminal domain › Pre-mRNA-splicing factor 8 N-terminal domain › Pre-mRNA-splicing factor 8 N-terminal domain › PROCN | 0.71 | 52.0 | 4.11e-01 | 78.5% | 63.2% |
| 3419308 | 2004.1.1.529 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 | 0.70 | 56.0 | 3.91e-01 | 87.7% | 66.2% |
| 3832427 | 2004.1.1.529 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 | 0.67 | 54.0 | 3.63e-01 | 89.2% | 53.7% |
| 4025776 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 42.0 | 3.83e-01 | 72.3% | 92.6% |
| 3222726 | 109.4.1.1816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › KANSL3_1st | 0.62 | 51.0 | 3.78e-01 | 90.8% | 65.9% |
| 3404252 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.62 | 42.0 | 3.19e-01 | 92.3% | 28.7% |
| 3478131 | 109.4.1.267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CIP2A_N | 0.60 | 51.0 | 2.90e-01 | 100.0% | 21.6% |
| 3719828 | 109.4.1.1127 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_Cnot1 | 0.59 | 49.0 | 3.56e-01 | 100.0% | 58.1% |
| 3208233 | 109.4.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA | 0.58 | 49.0 | 3.72e-01 | 98.5% | 37.6% |
| 3735782 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.58 | 50.0 | 3.94e-01 | 95.4% | 88.1% |
| 3499235 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.57 | 48.0 | 3.37e-01 | 100.0% | 57.5% |
| 3416820 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.56 | 44.0 | 3.39e-01 | 96.9% | 35.2% |
| 4161525 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.56 | 42.0 | 3.03e-01 | 83.1% | 87.4% |
| 3392612 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.56 | 44.0 | 3.30e-01 | 96.9% | 32.2% |
| 3841150 | 109.4.1.1847 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mak10, TPR_NAA35 | 0.55 | 44.0 | 2.82e-01 | 92.3% | 23.0% |
| 3282251 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.55 | 46.0 | 3.77e-01 | 95.4% | 91.5% |
| 3391350 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 46.0 | 3.72e-01 | 96.9% | 50.8% |
| 3935407 | 109.4.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 | 0.53 | 42.0 | 3.09e-01 | 95.4% | 35.2% |
| 5019837 | 2003.1.1.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH | 0.51 | 41.0 | 2.84e-01 | 93.8% | 41.6% |
| None | — | 0.51 | 41.0 | 2.84e-01 | 93.8% | 41.6% | |
| 3704855 | 2003.1.9.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF, E1_4HB | 0.51 | 40.0 | 2.78e-01 | 89.2% | 60.8% |
| 4312324 | 605.1.1.306 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF30649 | 0.51 | 38.0 | 3.66e-01 | 98.5% | 70.7% |
D4
medium
residues 432-494
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07969.18 best | Amidohydro_3 | 49.2 | 8.40e-13 | 100.0% | 13.1% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g9pA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.52 | 39.0 | 2.65e-01 | 85.7% | 28.9% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.50 | 41.0 | 3.16e-01 | 100.0% | 61.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973619 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 93.0 | 5.29e-01 | 100.0% | 12.1% |
| 4995648 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.94 | 88.0 | 5.13e-01 | 100.0% | 14.3% |
| 3980730 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.94 | 88.0 | 5.10e-01 | 100.0% | 13.3% |
| 5055201 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.93 | 73.0 | 4.26e-01 | 100.0% | 12.2% |
| 4417853 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.91 | 67.0 | 3.97e-01 | 81.0% | 11.7% |
| 4945928 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.90 | 71.0 | 4.16e-01 | 100.0% | 12.4% |
| 5063863 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.90 | 72.0 | 4.20e-01 | 100.0% | 12.0% |
| 3960764 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.90 | 81.0 | 4.73e-01 | 100.0% | 13.1% |
| 3599289 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.90 | 82.0 | 4.69e-01 | 100.0% | 12.2% |
| 4998524 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.90 | 83.0 | 4.76e-01 | 100.0% | 12.1% |
| 3969053 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.89 | 79.0 | 4.60e-01 | 100.0% | 12.9% |
| 3952876 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.89 | 79.0 | 4.61e-01 | 100.0% | 12.8% |
| 4015219 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.89 | 82.0 | 4.77e-01 | 100.0% | 14.5% |
| 3958508 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.89 | 79.0 | 4.61e-01 | 100.0% | 12.7% |
| 3281683 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.88 | 83.0 | 4.76e-01 | 100.0% | 13.2% |
| 3958557 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.88 | 78.0 | 4.56e-01 | 100.0% | 12.7% |
| 3179537 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.88 | 79.0 | 4.56e-01 | 100.0% | 11.8% |
| 3686607 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.88 | 81.0 | 4.70e-01 | 100.0% | 13.6% |
| 3431489 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.87 | 79.0 | 4.61e-01 | 100.0% | 13.1% |
| 3945234 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.86 | 78.0 | 4.53e-01 | 100.0% | 12.4% |
| 4996929 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.86 | 74.0 | 4.29e-01 | 100.0% | 12.6% |
| 3829748 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.86 | 78.0 | 4.55e-01 | 100.0% | 12.9% |
| 3283274 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.86 | 80.0 | 4.61e-01 | 100.0% | 13.3% |
| 5048420 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.84 | 76.0 | 4.62e-01 | 100.0% | 18.4% |
| 3948121 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.80 | 71.0 | 4.20e-01 | 100.0% | 13.9% |
| 4561551 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.75 | 60.0 | 3.91e-01 | 100.0% | 21.2% |
| 4010839 | 65.1.1.3 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_1 | 0.71 | 64.0 | 4.65e-01 | 100.0% | 49.7% |
| 4987011 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.63 | 49.0 | 4.06e-01 | 88.9% | 55.3% |
| 3319628 | 65.1.1.3 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_1 | 0.63 | 47.0 | 3.85e-01 | 82.5% | 44.2% |
| 3389601 | 3223.1.1.1 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC | 0.51 | 37.0 | 2.36e-01 | 81.0% | 17.7% |