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CAKLQF020000002.1__CAH1073181.1__SAMEA5780031_00406__00043
Bact-VirCAKLQF020000002.1__CAH1073181.1__SAMEA5780031_00406__00043
Identity
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 125-264_295-309
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00116.27 best | COX2 | 25.6 | 1.40e-05 | 52.3% | 61.7% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m56B02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.98 | 69.0 | 7.03e-01 | 72.3% | 98.0% |
| 6kobB01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.95 | 82.0 | 8.22e-01 | 100.0% | 87.8% |
| 5z62B02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.95 | 67.0 | 7.22e-01 | 72.3% | 97.8% |
| 1cywA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.94 | 85.0 | 8.44e-01 | 100.0% | 89.9% |
| 7qhmE02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.92 | 71.0 | 6.53e-01 | 78.1% | 98.9% |
| 2yevB02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.83 | 78.0 | 6.71e-01 | 98.1% | 92.5% |
| 4enzA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.71 | 53.0 | 4.82e-01 | 76.8% | 94.6% |
| 3sqrA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.68 | 52.0 | 4.77e-01 | 78.7% | 83.9% |
| 1l0qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 39.0 | 4.87e-01 | 72.3% | 95.6% |
| 3ppsA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.67 | 51.0 | 4.77e-01 | 78.1% | 83.6% |
| 1aozA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.66 | 50.0 | 4.52e-01 | 78.1% | 82.5% |
| 1zpuA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.65 | 50.0 | 4.70e-01 | 78.7% | 84.4% |
| 4bxsV03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.64 | 58.0 | 4.38e-01 | 96.1% | 67.8% |
| 5zl1A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.63 | 57.0 | 4.51e-01 | 96.8% | 58.8% |
| 3g5wA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.63 | 53.0 | 5.39e-01 | 89.0% | 98.7% |
| 2dv6A02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.61 | 56.0 | 4.37e-01 | 96.8% | 55.3% |
| 2ux6A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.60 | 45.0 | 5.04e-01 | 97.4% | 97.5% |
| 3wi9A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 54.0 | 4.29e-01 | 98.7% | 53.8% |
| 1aunA00 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.57 | 44.0 | 3.99e-01 | 79.4% | 99.0% |
| 4knuA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 52.0 | 5.19e-01 | 98.1% | 97.5% |
| 3g5wA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 50.0 | 4.93e-01 | 97.4% | 95.1% |
| 2xfdA00 | 2.60.60.40 | Mainly Beta › Sandwich › Lipoxygenase-1 › | 0.54 | 34.0 | 3.92e-01 | 78.1% | 88.1% |
| 3irzA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.98e-01 | 91.6% | 96.0% |
| 4iykA01 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.53 | 31.0 | 3.82e-01 | 90.3% | 94.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4642494 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.98 | 69.0 | 7.46e-01 | 72.3% | 82.2% |
| 4964058 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.98 | 71.0 | 8.11e-01 | 73.5% | 95.8% |
| 3737423 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.98 | 69.0 | 7.26e-01 | 72.3% | 96.5% |
| 4659688 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.97 | 70.0 | 6.33e-01 | 72.9% | 68.7% |
| 4491452 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.97 | 86.0 | 8.50e-01 | 100.0% | 87.5% |
| 4063263 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.97 | 86.0 | 7.96e-01 | 100.0% | 76.5% |
| 4388484 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.97 | 85.0 | 7.44e-01 | 100.0% | 65.4% |
| 4315972 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.96 | 70.0 | 7.51e-01 | 73.5% | 88.9% |
| 2834658 | 3156.1.1.31 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX1 | 0.96 | 68.0 | 7.30e-01 | 72.3% | 97.1% |
| 2715169 | 3156.1.1.2 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2,COX_ARM | 0.96 | 87.0 | 8.41e-01 | 100.0% | 85.6% |
| 4248934 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.96 | 66.0 | 6.23e-01 | 70.3% | 98.9% |
| 4963882 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.89 | 63.0 | 6.13e-01 | 100.0% | 66.3% |
| 4671271 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.85 | 70.0 | 6.92e-01 | 83.9% | 93.1% |
| 4358440 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.85 | 72.0 | 6.79e-01 | 87.1% | 92.8% |
| 5040471 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.85 | 68.0 | 7.44e-01 | 99.4% | 97.7% |
| 4091595 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.84 | 69.0 | 7.33e-01 | 96.1% | 94.2% |
| 4129058 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.80 | 72.0 | 7.10e-01 | 96.8% | 88.7% |
| 3970877 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.78 | 71.0 | 7.30e-01 | 98.7% | 96.7% |
| 2857539 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.78 | 72.0 | 6.23e-01 | 96.1% | 96.4% |
| 3583965 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.71 | 49.0 | 5.78e-01 | 98.1% | 98.2% |
| 2634987 | 3156.1.1.16 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2+Cu-oxidase_3 | 0.68 | 51.0 | 5.20e-01 | 76.8% | 82.8% |
| 4285426 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.65 | 49.0 | 4.79e-01 | 76.8% | 89.7% |
| 4862647 | 3156.1.1.9 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 | 0.65 | 55.0 | 5.30e-01 | 93.5% | 80.1% |
| 3881554 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.64 | 58.0 | 4.37e-01 | 96.1% | 64.8% |
| 3862958 | 3156.1.1.16 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2+Cu-oxidase_3 | 0.64 | 58.0 | 3.68e-01 | 96.8% | 35.3% |
| 4344065 | 3156.1.1.16 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2+Cu-oxidase_3 | 0.64 | 58.0 | 3.47e-01 | 97.4% | 22.3% |
| 3881553 | 3156.1.1.8 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2 | 0.64 | 58.0 | 4.40e-01 | 97.4% | 71.4% |
| 4954960 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 43.0 | 4.97e-01 | 93.5% | 100.0% |
| 3246961 | 11.1.1.572 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cep192_D4 | 0.56 | 42.0 | 4.55e-01 | 95.5% | 93.8% |
| 1251788 | 3156.1.1.4 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase | 0.55 | 49.0 | 4.58e-01 | 93.5% | 90.2% |
D2
medium
residues 31-63_90-121
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.74 | 63.0 | 6.08e-01 | 93.8% | 82.4% |
| 3k17A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.73 | 56.0 | 4.32e-01 | 87.7% | 37.9% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.73 | 50.0 | 4.69e-01 | 83.1% | 58.2% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.73 | 63.0 | 5.78e-01 | 96.9% | 83.5% |
| 4a25B01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 62.0 | 4.57e-01 | 93.8% | 72.7% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.72 | 61.0 | 6.08e-01 | 95.4% | 91.2% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.72 | 50.0 | 5.66e-01 | 86.2% | 100.0% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.70 | 49.0 | 3.89e-01 | 81.5% | 37.9% |
| 1zymA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.70 | 60.0 | 4.79e-01 | 98.5% | 48.4% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.69 | 50.0 | 5.47e-01 | 86.2% | 96.1% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.69 | 58.0 | 4.52e-01 | 95.4% | 80.6% |
| 6umqA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.69 | 62.0 | 5.09e-01 | 100.0% | 84.3% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.68 | 54.0 | 5.08e-01 | 96.9% | 70.7% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 51.0 | 4.50e-01 | 83.1% | 93.0% |
| 1kf6C00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.68 | 48.0 | 3.80e-01 | 93.8% | 36.9% |
| 2zueA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.67 | 53.0 | 4.35e-01 | 92.3% | 47.1% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 56.0 | 4.42e-01 | 98.5% | 78.9% |
| 3syvA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 57.0 | 3.92e-01 | 100.0% | 70.2% |
| 2xl4A00 | 1.20.120.1420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › LntA helical domain | 0.66 | 55.0 | 4.25e-01 | 93.8% | 40.8% |
| 1f7uA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.66 | 53.0 | 4.31e-01 | 92.3% | 45.6% |
| 1jkvA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 54.0 | 3.93e-01 | 93.8% | 74.1% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.66 | 46.0 | 5.02e-01 | 78.5% | 90.4% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 51.0 | 4.98e-01 | 89.2% | 75.7% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 51.0 | 4.53e-01 | 92.3% | 59.1% |
| 1z5zA02 | 1.20.120.850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SWI2/SNF2 ATPases, N-terminal domain | 0.66 | 49.0 | 4.72e-01 | 100.0% | 69.7% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 54.0 | 3.89e-01 | 90.8% | 62.8% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 45.0 | 4.67e-01 | 89.2% | 77.4% |
| 4hb1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 43.0 | 4.84e-01 | 95.4% | 100.0% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 49.0 | 4.45e-01 | 83.1% | 72.5% |
| 2nwbA02 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 52.0 | 3.65e-01 | 93.8% | 80.6% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.64 | 52.0 | 4.75e-01 | 96.9% | 67.8% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.64 | 45.0 | 4.24e-01 | 86.2% | 58.5% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 52.0 | 4.52e-01 | 92.3% | 63.1% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.64 | 51.0 | 4.43e-01 | 87.7% | 96.0% |
| 1dd3A01 | 1.20.5.710 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.63 | 41.0 | 4.38e-01 | 73.8% | 77.2% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.63 | 46.0 | 4.33e-01 | 92.3% | 62.7% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.63 | 44.0 | 4.93e-01 | 81.5% | 100.0% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 53.0 | 4.32e-01 | 95.4% | 83.1% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 52.0 | 5.01e-01 | 95.4% | 88.0% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 52.0 | 4.40e-01 | 95.4% | 59.3% |
| 1rtwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.62 | 52.0 | 3.70e-01 | 96.9% | 53.8% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 53.0 | 4.90e-01 | 100.0% | 84.7% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.61 | 52.0 | 3.52e-01 | 98.5% | 29.4% |
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.61 | 46.0 | 4.71e-01 | 84.6% | 93.4% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 50.0 | 4.82e-01 | 93.8% | 80.3% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.60 | 44.0 | 4.39e-01 | 81.5% | 78.6% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 48.0 | 4.75e-01 | 92.3% | 91.3% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 48.0 | 4.92e-01 | 92.3% | 100.0% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 50.0 | 4.41e-01 | 96.9% | 63.3% |
| 3ltoA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.58 | 51.0 | 4.04e-01 | 98.5% | 56.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.58 | 44.0 | 4.48e-01 | 90.8% | 91.8% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 46.0 | 4.84e-01 | 92.3% | 100.0% |
| 1m4rB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 39.0 | 3.03e-01 | 72.3% | 100.0% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 44.0 | 4.46e-01 | 86.2% | 89.4% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.55 | 44.0 | 4.37e-01 | 96.9% | 87.1% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971727 | 5043.2.1.0 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain | 0.80 | 60.0 | 6.45e-01 | 80.0% | 100.0% |
| 3670388 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 59.0 | 4.56e-01 | 89.2% | 37.8% |
| 3341663 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.73 | 63.0 | 4.26e-01 | 92.3% | 29.5% |
| 5031927 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.73 | 57.0 | 5.26e-01 | 86.2% | 77.6% |
| 4937862 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.71 | 55.0 | 4.66e-01 | 93.8% | 50.0% |
| 3170239 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 57.0 | 5.14e-01 | 89.2% | 64.4% |
| 3632454 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.70 | 55.0 | 5.07e-01 | 89.2% | 65.9% |
| 3956906 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.69 | 57.0 | 5.45e-01 | 90.8% | 90.7% |
| 3717860 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.68 | 60.0 | 5.41e-01 | 100.0% | 81.1% |
| 3930950 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 58.0 | 5.43e-01 | 100.0% | 77.5% |
| 3186258 | 3911.1.1.1 ↗ | extended segments › Exosome complex protein LRP1 › Exosome complex protein LRP1 › Exosome complex protein LRP1 › Sas10_Utp3 | 0.68 | 54.0 | 4.64e-01 | 90.8% | 54.3% |
| 3264401 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.68 | 54.0 | 5.18e-01 | 86.2% | 80.0% |
| 4831662 | 5043.1.1.1 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like › Htr2 | 0.68 | 57.0 | 5.68e-01 | 93.8% | 98.5% |
| 5033222 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.68 | 52.0 | 4.39e-01 | 81.5% | 50.5% |
| 5027220 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.68 | 55.0 | 5.70e-01 | 95.4% | 98.3% |
| 3773235 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.68 | 51.0 | 4.62e-01 | 90.8% | 58.9% |
| 4945931 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.67 | 51.0 | 5.08e-01 | 93.8% | 78.6% |
| 5001217 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.67 | 55.0 | 5.26e-01 | 96.9% | 78.7% |
| 3766437 | 601.16.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › Insc_C | 0.66 | 51.0 | 4.31e-01 | 87.7% | 48.7% |
| 4041347 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.66 | 55.0 | 4.69e-01 | 95.4% | 91.8% |
| 3399433 | 3826.1.1.39 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › WHEP-TRS | 0.66 | 52.0 | 5.17e-01 | 90.8% | 84.3% |
| 3699098 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.65 | 52.0 | 4.91e-01 | 89.2% | 100.0% |
| 3240117 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.65 | 55.0 | 5.00e-01 | 96.9% | 72.2% |
| 3744275 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.64 | 53.0 | 4.93e-01 | 93.8% | 81.2% |
| 3269029 | 191.1.1.6 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › COQ9 | 0.64 | 46.0 | 3.77e-01 | 83.1% | 40.0% |
| 5050301 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.64 | 55.0 | 5.11e-01 | 98.5% | 77.4% |
| 3391978 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.64 | 50.0 | 4.80e-01 | 93.8% | 76.0% |
| 3598650 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 53.0 | 4.74e-01 | 96.9% | 73.7% |
| 3968647 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 52.0 | 5.25e-01 | 93.8% | 93.8% |
| 3590755 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 50.0 | 5.13e-01 | 95.4% | 98.3% |
| 3307959 | 3835.1.1.3 ↗ | alpha bundles › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › DUF842 | 0.62 | 52.0 | 5.21e-01 | 96.9% | 100.0% |
| 3559003 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 51.0 | 4.54e-01 | 96.9% | 72.0% |
| 3737505 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 52.0 | 5.04e-01 | 98.5% | 97.3% |
| 3776400 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.61 | 53.0 | 5.01e-01 | 98.5% | 92.5% |
| 4034278 | 5043.1.1.0 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like | 0.60 | 48.0 | 5.01e-01 | 96.9% | 100.0% |
| 4033399 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 51.0 | 3.11e-01 | 96.9% | 48.2% |
| 2388286 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.59 | 50.0 | 4.84e-01 | 92.3% | 98.6% |
| 3237801 | 109.4.1.93 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF6_C | 0.58 | 45.0 | 3.15e-01 | 89.2% | 23.2% |
| 4122452 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.57 | 45.0 | 4.40e-01 | 93.8% | 80.0% |
| 4119718 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.56 | 44.0 | 4.10e-01 | 92.3% | 80.0% |
| 3426060 | 191.1.1.6 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › COQ9 | 0.56 | 46.0 | 3.64e-01 | 93.8% | 42.8% |
| 4939465 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.54 | 47.0 | 3.97e-01 | 100.0% | 55.7% |