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CAKLQF020000002.1__CAH1073194.1__SAMEA5780031_00410__00047
Bact-VirCAKLQF020000002.1__CAH1073194.1__SAMEA5780031_00410__00047
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-170
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01040.24 best | UbiA | 148.8 | 2.40e-43 | 90.6% | 60.0% |
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.83 | 73.0 | 7.66e-01 | 92.4% | 100.0% |
| 1yhlA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.79 | 74.0 | 5.68e-01 | 100.0% | 57.2% |
| 3ipiA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.79 | 72.0 | 6.07e-01 | 100.0% | 60.8% |
| 4kk2B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.78 | 72.0 | 5.71e-01 | 100.0% | 56.8% |
| 2azjA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.77 | 70.0 | 5.86e-01 | 99.4% | 59.4% |
| 2h8oA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.77 | 72.0 | 5.99e-01 | 100.0% | 65.4% |
| 3rmgA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.77 | 66.0 | 5.38e-01 | 100.0% | 51.5% |
| 3apzA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.76 | 66.0 | 5.38e-01 | 97.1% | 52.2% |
| 3lomA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.76 | 71.0 | 5.85e-01 | 100.0% | 64.2% |
| 1v4eA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.74 | 68.0 | 5.72e-01 | 100.0% | 60.0% |
| 6vydA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.68 | 59.0 | 4.88e-01 | 99.4% | 52.7% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.63 | 58.0 | 4.76e-01 | 99.4% | 62.2% |
| 3kb9A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.61 | 56.0 | 4.45e-01 | 100.0% | 52.6% |
| 1di1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.61 | 55.0 | 4.58e-01 | 100.0% | 57.2% |
| 4mc3A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 54.0 | 4.51e-01 | 100.0% | 58.9% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.59 | 39.0 | 4.36e-01 | 76.5% | 87.5% |
| 1dowA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 41.0 | 3.87e-01 | 72.4% | 59.5% |
| 7q37A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 45.0 | 4.16e-01 | 80.6% | 91.1% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 45.0 | 3.96e-01 | 81.2% | 93.7% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.58 | 31.0 | 3.85e-01 | 71.8% | 85.0% |
| 8anqA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 48.0 | 4.41e-01 | 91.2% | 70.1% |
| 3o10C00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.57 | 31.0 | 3.44e-01 | 78.8% | 66.9% |
| 3vvaA00 | 1.20.1260.140 | Mainly Alpha › Up-down Bundle › Ferritin › Alternative oxidase | 0.55 | 41.0 | 3.50e-01 | 75.9% | 48.1% |
| 3f5cB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 40.0 | 3.98e-01 | 100.0% | 71.0% |
| 6o7uc01 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.54 | 38.0 | 3.71e-01 | 72.4% | 77.4% |
| 3jrtA00 | 1.20.120.1060 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 38.0 | 3.88e-01 | 71.8% | 98.2% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.53 | 34.0 | 3.50e-01 | 71.8% | 65.1% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 42.0 | 3.38e-01 | 83.5% | 91.0% |
| 7zdtD01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.53 | 40.0 | 3.21e-01 | 77.6% | 93.3% |
| 4ecgA00 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.51 | 43.0 | 3.38e-01 | 91.2% | 73.6% |
| 2np5D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 40.0 | 4.10e-01 | 91.2% | 87.3% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 39.0 | 3.76e-01 | 80.0% | 89.6% |
| 3ee4A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.51 | 45.0 | 3.78e-01 | 96.5% | 84.8% |
| 5hyhA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.50 | 45.0 | 3.78e-01 | 97.1% | 96.2% |
| 2d5bA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.50 | 34.0 | 3.54e-01 | 70.0% | 100.0% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4352518 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.99 | 98.0 | 7.88e-01 | 100.0% | 60.0% |
| 4464309 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.99 | 98.0 | 7.68e-01 | 100.0% | 55.7% |
| 4206400 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.98 | 97.0 | 7.79e-01 | 100.0% | 59.6% |
| 4087284 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.98 | 95.0 | 7.71e-01 | 97.6% | 61.1% |
| 5042541 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.98 | 95.0 | 7.69e-01 | 99.4% | 60.0% |
| 4351629 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.98 | 96.0 | 7.62e-01 | 100.0% | 58.0% |
| 4497429 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.98 | 94.0 | 7.53e-01 | 100.0% | 57.6% |
| 4944947 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.97 | 95.0 | 7.74e-01 | 100.0% | 60.7% |
| 4539519 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.97 | 93.0 | 7.60e-01 | 99.4% | 59.6% |
| 4143737 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.97 | 95.0 | 7.53e-01 | 99.4% | 59.3% |
| 4321617 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.97 | 95.0 | 7.43e-01 | 100.0% | 55.2% |
| 3624281 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.97 | 94.0 | 7.61e-01 | 100.0% | 59.3% |
| 4173934 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.97 | 94.0 | 7.53e-01 | 100.0% | 59.0% |
| 4158660 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 92.0 | 7.49e-01 | 97.6% | 61.1% |
| 4179665 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 92.0 | 7.33e-01 | 98.8% | 55.7% |
| 3961583 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 93.0 | 8.80e-01 | 99.4% | 86.7% |
| 4015113 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.96 | 94.0 | 7.14e-01 | 100.0% | 58.8% |
| 4388995 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 93.0 | 7.55e-01 | 99.4% | 60.2% |
| 3712107 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 90.0 | 7.32e-01 | 98.2% | 58.2% |
| 4314019 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 93.0 | 7.53e-01 | 100.0% | 59.3% |
| 4263383 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 86.0 | 6.97e-01 | 91.2% | 60.0% |
| 3206555 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 94.0 | 7.11e-01 | 100.0% | 58.8% |
| 4073222 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 94.0 | 7.47e-01 | 100.0% | 57.6% |
| 4039368 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 93.0 | 7.55e-01 | 100.0% | 59.9% |
| 4984425 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 92.0 | 7.15e-01 | 98.2% | 53.7% |
| 4026531 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 93.0 | 7.48e-01 | 100.0% | 59.0% |
| 4964056 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 93.0 | 7.22e-01 | 100.0% | 53.4% |
| 4099449 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 80.0 | 6.76e-01 | 85.9% | 57.3% |
| 4526984 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 93.0 | 7.50e-01 | 100.0% | 60.4% |
| 4527343 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 92.0 | 7.38e-01 | 100.0% | 57.0% |
| 4414678 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 93.0 | 7.41e-01 | 100.0% | 58.6% |
| 3595256 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.95 | 91.0 | 7.41e-01 | 100.0% | 59.6% |
| 4219383 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 91.0 | 7.27e-01 | 98.8% | 59.7% |
| 4085617 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 91.0 | 7.45e-01 | 99.4% | 60.7% |
| 4579281 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 92.0 | 7.35e-01 | 100.0% | 58.0% |
| 4625698 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 90.0 | 7.31e-01 | 97.6% | 58.2% |
| 3271022 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 92.0 | 7.51e-01 | 99.4% | 61.5% |
| 3645173 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 87.0 | 6.94e-01 | 94.7% | 59.7% |
| 4350232 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 92.0 | 7.35e-01 | 100.0% | 58.3% |
| 4987722 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 91.0 | 7.41e-01 | 100.0% | 59.7% |
| 4931978 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 87.0 | 7.09e-01 | 100.0% | 56.8% |
| 4588682 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 91.0 | 7.17e-01 | 100.0% | 56.8% |
| 4376070 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 91.0 | 7.51e-01 | 100.0% | 62.6% |
| 4438075 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 90.0 | 7.28e-01 | 98.2% | 58.8% |
| 4153753 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 90.0 | 7.23e-01 | 99.4% | 57.3% |
| 4941826 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.92 | 86.0 | 7.07e-01 | 100.0% | 59.6% |
| 4978830 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.92 | 89.0 | 6.79e-01 | 100.0% | 54.4% |
| 5079617 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.92 | 75.0 | 6.35e-01 | 97.1% | 55.7% |
| 4597479 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 88.0 | 7.23e-01 | 100.0% | 60.7% |
| 5037826 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 85.0 | 7.05e-01 | 99.4% | 60.0% |
| 4939861 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 88.0 | 7.19e-01 | 100.0% | 61.8% |
| 5013957 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 86.0 | 7.31e-01 | 98.2% | 65.5% |
| 5024764 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 85.0 | 7.00e-01 | 97.6% | 60.0% |
| 5027868 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 84.0 | 6.99e-01 | 100.0% | 60.7% |
| 5033911 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 87.0 | 6.93e-01 | 100.0% | 58.0% |
| 3386510 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 87.0 | 7.04e-01 | 100.0% | 59.5% |
| 5043455 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 81.0 | 6.70e-01 | 100.0% | 57.1% |
| 5028986 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 86.0 | 7.02e-01 | 100.0% | 62.1% |
| 5009356 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 86.0 | 7.00e-01 | 100.0% | 61.4% |
| 4052225 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 86.0 | 6.96e-01 | 100.0% | 58.6% |
| 3521692 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 86.0 | 6.91e-01 | 100.0% | 58.6% |
| 4055031 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 86.0 | 6.83e-01 | 100.0% | 63.6% |
| 4084416 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 85.0 | 6.86e-01 | 100.0% | 60.7% |
| 3697453 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 85.0 | 6.71e-01 | 100.0% | 62.2% |
| 5060427 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 84.0 | 6.55e-01 | 98.2% | 52.9% |
| 5081551 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 84.0 | 6.61e-01 | 100.0% | 52.5% |
| 5079912 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 84.0 | 6.72e-01 | 99.4% | 55.7% |
| 4977753 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 83.0 | 6.80e-01 | 98.2% | 58.2% |
| 4931255 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.89 | 85.0 | 6.85e-01 | 100.0% | 60.7% |
| 4237149 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.90e-01 | 100.0% | 60.0% |
| 5034896 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 83.0 | 6.48e-01 | 100.0% | 50.6% |
| 4942290 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 82.0 | 7.15e-01 | 96.5% | 70.0% |
| 4177810 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.80e-01 | 100.0% | 57.9% |
| 4084745 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.86e-01 | 100.0% | 58.6% |
| 4935730 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 83.0 | 6.74e-01 | 100.0% | 57.6% |
| 4018335 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.55e-01 | 100.0% | 61.8% |
| 5034469 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.55e-01 | 100.0% | 52.4% |
| 4390125 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.79e-01 | 100.0% | 61.7% |
| 5038189 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 83.0 | 6.81e-01 | 98.8% | 58.9% |
| 4991822 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.91e-01 | 100.0% | 61.4% |
| 3472681 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 7.77e-01 | 100.0% | 84.4% |
| 5054453 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 81.0 | 6.82e-01 | 98.2% | 62.3% |
| 4396631 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.53e-01 | 100.0% | 64.1% |
| 3601597 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.87 | 83.0 | 6.62e-01 | 100.0% | 61.0% |
| 4987281 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 82.0 | 6.79e-01 | 100.0% | 60.4% |
| 3284802 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.69e-01 | 100.0% | 57.6% |
| 5074080 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 82.0 | 6.47e-01 | 98.8% | 56.8% |
| 5035065 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.44e-01 | 100.0% | 52.7% |
| 4026984 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 82.0 | 6.40e-01 | 100.0% | 55.8% |
| 4089212 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 81.0 | 6.64e-01 | 100.0% | 58.3% |
| 5034155 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.32e-01 | 98.2% | 53.1% |
| 4247980 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 81.0 | 6.61e-01 | 100.0% | 61.0% |
| 5047271 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 81.0 | 6.67e-01 | 100.0% | 63.9% |
| 4567396 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.50e-01 | 100.0% | 61.9% |
| 4018701 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.81 | 76.0 | 6.06e-01 | 100.0% | 64.8% |
| 4973919 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.80 | 73.0 | 5.99e-01 | 98.8% | 56.2% |
| 4959457 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.80 | 75.0 | 6.13e-01 | 100.0% | 57.3% |
| 4001372 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.75 | 70.0 | 5.62e-01 | 100.0% | 61.9% |
| 3698895 | 150.1.1.2 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › AOX | 0.55 | 40.0 | 3.59e-01 | 75.3% | 61.3% |
| 5056068 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 36.0 | 3.42e-01 | 70.0% | 62.5% |
D2
medium
residues 171-292
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01040.24 best | UbiA | 46.1 | 5.60e-12 | 81.2% | 40.4% |
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.76 | 57.0 | 5.89e-01 | 91.0% | 84.1% |
| 2okuA00 | 1.20.120.470 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Acyl-CoA dehydrogenase, C-terminal domain | 0.76 | 52.0 | 5.27e-01 | 70.5% | 76.2% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.75 | 55.0 | 5.51e-01 | 75.4% | 86.1% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.74 | 51.0 | 5.29e-01 | 70.5% | 80.2% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.72 | 61.0 | 6.16e-01 | 95.1% | 91.7% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.72 | 66.0 | 5.41e-01 | 100.0% | 74.7% |
| 2l10A00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.71 | 59.0 | 5.36e-01 | 91.8% | 67.1% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.71 | 62.0 | 6.09e-01 | 100.0% | 86.9% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.71 | 60.0 | 5.74e-01 | 95.1% | 79.6% |
| 1st6A04 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.71 | 59.0 | 6.02e-01 | 88.5% | 94.0% |
| 1a7vA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.70 | 58.0 | 5.76e-01 | 86.9% | 88.8% |
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.70 | 58.0 | 5.90e-01 | 95.1% | 89.9% |
| 2hz8A00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.69 | 56.0 | 5.80e-01 | 89.3% | 92.2% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.69 | 49.0 | 5.03e-01 | 74.6% | 78.1% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.69 | 57.0 | 5.85e-01 | 91.0% | 91.5% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.69 | 59.0 | 5.16e-01 | 91.8% | 69.7% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.69 | 46.0 | 4.23e-01 | 80.3% | 53.2% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.68 | 59.0 | 5.71e-01 | 95.1% | 85.1% |
| 2yevA03 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.67 | 59.0 | 5.14e-01 | 95.1% | 67.9% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.67 | 57.0 | 5.73e-01 | 93.4% | 92.6% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.67 | 57.0 | 5.50e-01 | 95.1% | 83.1% |
| 4cbeA00 | 1.20.120.1640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 52.0 | 4.40e-01 | 93.4% | 49.3% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.66 | 49.0 | 4.65e-01 | 78.7% | 64.6% |
| 1h6gA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.66 | 56.0 | 5.71e-01 | 95.1% | 94.1% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 50.0 | 3.93e-01 | 80.3% | 88.9% |
| 2d4uB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.66 | 57.0 | 5.35e-01 | 96.7% | 80.0% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 56.0 | 5.34e-01 | 98.4% | 79.7% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.65 | 59.0 | 5.42e-01 | 99.2% | 84.1% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.65 | 40.0 | 4.69e-01 | 71.3% | 88.1% |
| 2d1lA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 51.0 | 4.04e-01 | 83.6% | 84.3% |
| 1kqfC00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.64 | 56.0 | 4.66e-01 | 95.9% | 87.0% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.64 | 40.0 | 4.82e-01 | 89.3% | 100.0% |
| 1s05A00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.64 | 53.0 | 5.20e-01 | 89.3% | 86.0% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.64 | 55.0 | 4.76e-01 | 94.3% | 72.9% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.64 | 57.0 | 5.31e-01 | 97.5% | 79.7% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 42.0 | 4.54e-01 | 73.0% | 80.4% |
| 1jmwA00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.63 | 55.0 | 5.22e-01 | 95.9% | 84.2% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.63 | 44.0 | 4.54e-01 | 73.0% | 86.3% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.62 | 52.0 | 5.15e-01 | 90.2% | 90.8% |
| 2kbbA00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.62 | 54.0 | 4.78e-01 | 95.1% | 67.2% |
| 2oezA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.61 | 49.0 | 4.46e-01 | 85.2% | 98.2% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 41.0 | 3.81e-01 | 99.2% | 53.2% |
| 5dkoA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.61 | 48.0 | 4.36e-01 | 84.4% | 95.8% |
| 7tj9A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.61 | 46.0 | 4.92e-01 | 89.3% | 92.5% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.60 | 41.0 | 4.38e-01 | 70.5% | 81.3% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.60 | 41.0 | 3.28e-01 | 70.5% | 81.0% |
| 3ripA02 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.59 | 49.0 | 3.77e-01 | 90.2% | 72.4% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 45.0 | 4.68e-01 | 88.5% | 87.6% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.58 | 48.0 | 4.78e-01 | 88.5% | 86.4% |
| 4uvmA00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.58 | 51.0 | 3.43e-01 | 100.0% | 23.6% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 50.0 | 4.34e-01 | 91.8% | 83.6% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 38.0 | 4.22e-01 | 70.5% | 84.5% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.56 | 38.0 | 4.04e-01 | 76.2% | 76.4% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 4.02e-01 | 70.5% | 82.1% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.55 | 47.0 | 4.52e-01 | 95.9% | 86.2% |
| 5c4yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 43.0 | 4.16e-01 | 86.9% | 77.2% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.53 | 44.0 | 4.03e-01 | 90.2% | 98.1% |
| 2wglA00 | 1.10.4190.10 | Mainly Alpha › Orthogonal Bundle › Urease accessory protein UreF › Urease accessory protein UreF | 0.52 | 40.0 | 3.39e-01 | 81.1% | 73.2% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4206400 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 84.0 | 6.13e-01 | 90.2% | 38.6% |
| 4263383 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.96 | 85.0 | 6.23e-01 | 91.8% | 40.0% |
| 4464309 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 89.0 | 6.34e-01 | 95.9% | 39.3% |
| 4352518 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 87.0 | 6.28e-01 | 93.4% | 40.0% |
| 4143737 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 87.0 | 6.27e-01 | 94.3% | 39.7% |
| 4351629 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.95 | 85.0 | 6.09e-01 | 92.6% | 38.0% |
| 5042541 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 84.0 | 6.12e-01 | 92.6% | 40.0% |
| 4087284 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 80.0 | 5.88e-01 | 87.7% | 38.9% |
| 4039368 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.94 | 85.0 | 6.18e-01 | 93.4% | 40.1% |
| 4314019 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.93 | 79.0 | 5.76e-01 | 88.5% | 37.5% |
| 4073768 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.93 | 82.0 | 6.02e-01 | 91.8% | 40.0% |
| 4539519 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.93 | 82.0 | 6.02e-01 | 91.8% | 40.4% |
| 4527343 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.92 | 82.0 | 5.94e-01 | 93.4% | 39.3% |
| 4497429 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 83.0 | 6.01e-01 | 94.3% | 39.7% |
| 5001888 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 82.0 | 5.88e-01 | 93.4% | 38.3% |
| 3206555 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 82.0 | 5.68e-01 | 94.3% | 33.5% |
| 4608311 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.91 | 79.0 | 5.75e-01 | 91.0% | 39.3% |
| 4984425 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 79.0 | 5.67e-01 | 93.4% | 35.9% |
| 4350232 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 80.0 | 5.82e-01 | 93.4% | 38.6% |
| 4941826 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 78.0 | 5.79e-01 | 91.8% | 40.4% |
| 5079617 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 79.0 | 6.02e-01 | 93.4% | 44.3% |
| 4382409 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 79.0 | 5.84e-01 | 93.4% | 40.4% |
| 4977753 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 81.0 | 5.96e-01 | 95.1% | 41.8% |
| 4987722 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 79.0 | 5.81e-01 | 93.4% | 39.9% |
| 4015113 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.89 | 79.0 | 5.54e-01 | 94.3% | 33.5% |
| 4956655 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 76.0 | 5.66e-01 | 90.2% | 40.0% |
| 4960914 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 79.0 | 5.73e-01 | 93.4% | 39.8% |
| 4976446 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 79.0 | 5.80e-01 | 93.4% | 40.7% |
| 5042650 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 75.0 | 5.58e-01 | 91.0% | 39.6% |
| 4237149 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 74.0 | 5.46e-01 | 92.6% | 38.2% |
| 4944947 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 75.0 | 5.53e-01 | 89.3% | 39.3% |
| 4974029 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 73.0 | 5.42e-01 | 91.8% | 38.5% |
| 4026531 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 76.0 | 5.56e-01 | 91.8% | 38.6% |
| 5072228 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 74.0 | 5.38e-01 | 91.8% | 36.1% |
| 3285606 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 75.0 | 5.64e-01 | 91.8% | 42.6% |
| 3289222 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 76.0 | 5.53e-01 | 95.1% | 41.3% |
| 4388995 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.84 | 73.0 | 5.43e-01 | 91.8% | 39.8% |
| 3457663 | 192.29.1.178 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF28703 | 0.84 | 63.0 | 6.78e-01 | 88.5% | 90.5% |
| 4929750 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.82 | 71.0 | 5.20e-01 | 91.8% | 38.7% |
| 3370777 | 192.29.1.251 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › UbiA | 0.81 | 71.0 | 5.97e-01 | 93.4% | 63.1% |
| 5058966 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.80 | 68.0 | 5.21e-01 | 91.0% | 41.1% |
| 4967591 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.80 | 66.0 | 4.89e-01 | 94.3% | 36.8% |
| 4973453 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.80 | 69.0 | 5.32e-01 | 93.4% | 44.2% |
| 4962839 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.79 | 66.0 | 4.92e-01 | 90.2% | 38.2% |
| 3299195 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.78 | 70.0 | 5.17e-01 | 95.9% | 40.0% |
| 3582053 | 601.1.2.64 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_VBS2 | 0.74 | 59.0 | 6.27e-01 | 86.1% | 97.1% |
| 3822717 | 192.29.1.170 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Hemerythrin | 0.72 | 67.0 | 5.29e-01 | 100.0% | 69.8% |
| 3583786 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.70 | 56.0 | 5.59e-01 | 93.4% | 81.6% |
| 3519442 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 61.0 | 5.64e-01 | 94.3% | 80.6% |
| 5079439 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.70 | 52.0 | 5.51e-01 | 95.1% | 89.5% |
| 4133341 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.69 | 56.0 | 5.71e-01 | 91.8% | 89.2% |
| 3471904 | 601.1.1.57 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Talin_VBS2 | 0.69 | 58.0 | 5.96e-01 | 96.7% | 94.8% |
| 3975942 | 601.4.1.6 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TorS_sensor_domain | 0.68 | 57.0 | 5.65e-01 | 96.7% | 85.4% |
| 4241935 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.68 | 46.0 | 5.05e-01 | 73.8% | 86.0% |
| 4993965 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.67 | 57.0 | 5.36e-01 | 91.8% | 81.3% |
| 3931311 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.66 | 55.0 | 5.26e-01 | 95.1% | 76.6% |
| 4091420 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.66 | 55.0 | 5.26e-01 | 92.6% | 76.6% |
| 3382357 | 192.29.1.48 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Chloroplast_duf | 0.66 | 51.0 | 5.38e-01 | 91.0% | 91.8% |
| 3616343 | 601.1.1.97 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DNA_repr_REX1B | 0.65 | 54.0 | 5.24e-01 | 89.3% | 86.7% |
| 4968618 | 611.6.1.0 ↗ | alpha bundles › N-cbl like › PT26-6P helical domain › PT26-6P helical domain | 0.65 | 45.0 | 4.92e-01 | 71.3% | 94.9% |
| 4959549 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.64 | 56.0 | 4.86e-01 | 95.1% | 64.3% |
| 3730903 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.64 | 55.0 | 5.15e-01 | 100.0% | 76.0% |
| 3989529 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.63 | 52.0 | 4.20e-01 | 89.3% | 67.1% |
| 3669753 | 3684.1.1.34 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › Rx_N | 0.63 | 53.0 | 5.35e-01 | 100.0% | 88.8% |
| 4928655 | 5069.1.1.6 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › COX15-CtaA | 0.63 | 55.0 | 5.18e-01 | 97.5% | 86.7% |
| 3711717 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.63 | 46.0 | 4.13e-01 | 77.0% | 56.5% |
| 3791551 | 3755.3.1.447 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DNA_repr_REX1B | 0.62 | 53.0 | 4.97e-01 | 92.6% | 78.4% |
| 4545639 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 55.0 | 5.47e-01 | 95.9% | 94.4% |
| 5038452 | 5069.1.1.6 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › COX15-CtaA | 0.62 | 54.0 | 5.10e-01 | 95.1% | 89.0% |
| 3580885 | 601.4.1.12 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › DNA_repr_REX1B | 0.62 | 52.0 | 4.96e-01 | 91.8% | 78.6% |
| 4021307 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.62 | 49.0 | 3.88e-01 | 96.7% | 40.7% |
| 4211611 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.61 | 49.0 | 4.68e-01 | 86.1% | 74.5% |
| 3775375 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.61 | 50.0 | 4.69e-01 | 88.5% | 81.3% |
| 3623581 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.61 | 46.0 | 3.81e-01 | 79.5% | 75.0% |
| 3644387 | 601.1.2.81 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Serinc | 0.59 | 47.0 | 4.46e-01 | 88.5% | 70.7% |
| 4021619 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.57 | 51.0 | 3.76e-01 | 100.0% | 82.1% |
| 4999398 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.54 | 44.0 | 3.54e-01 | 89.3% | 65.9% |
| 3840124 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 44.0 | 4.45e-01 | 94.3% | 91.2% |
| 5065166 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.51 | 41.0 | 3.49e-01 | 87.7% | 54.8% |