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CAKLQF020000002.1__CAH1073200.1__SAMEA5780031_00412__00049
Bact-VirCAKLQF020000002.1__CAH1073200.1__SAMEA5780031_00412__00049
Identity
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-65
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01084.27 best | Ribosomal_S18 | 83.2 | 1.60e-23 | 98.0% | 92.3% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5x8rr00 | 4.10.640.10 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › Ribosomal protein S18 | 0.92 | 86.0 | 7.79e-01 | 100.0% | 78.1% |
| 2uubR00 | 4.10.640.10 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › Ribosomal protein S18 | 0.90 | 82.0 | 7.10e-01 | 100.0% | 67.1% |
| 6nqbR00 | 4.10.640.10 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › Ribosomal protein S18 | 0.84 | 62.0 | 6.32e-01 | 86.0% | 81.6% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 47.0 | 4.76e-01 | 84.0% | 79.2% |
| 4kmgA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.61 | 51.0 | 4.28e-01 | 94.0% | 90.9% |
| 5tw1D01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.58 | 51.0 | 3.66e-01 | 100.0% | 44.5% |
| 6t4hA03 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.50 | 42.0 | 2.99e-01 | 100.0% | 97.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4072869 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.98 | 93.0 | 7.86e-01 | 100.0% | 68.0% |
| 3472076 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.97 | 90.0 | 6.31e-01 | 100.0% | 36.3% |
| 4152935 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.96 | 90.0 | 7.63e-01 | 100.0% | 66.2% |
| 4422725 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.96 | 91.0 | 7.78e-01 | 100.0% | 75.3% |
| 4501983 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.96 | 91.0 | 7.37e-01 | 100.0% | 58.8% |
| 4436996 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.96 | 91.0 | 7.72e-01 | 100.0% | 66.7% |
| 4027612 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.96 | 90.0 | 7.48e-01 | 100.0% | 62.5% |
| 4135760 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.95 | 90.0 | 7.29e-01 | 100.0% | 58.8% |
| 4154823 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.95 | 90.0 | 8.07e-01 | 100.0% | 80.0% |
| 3398278 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.95 | 87.0 | 6.80e-01 | 100.0% | 51.6% |
| 4415500 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.94 | 88.0 | 7.97e-01 | 100.0% | 78.5% |
| 3637454 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.94 | 89.0 | 6.28e-01 | 100.0% | 39.2% |
| 3215682 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.94 | 89.0 | 6.29e-01 | 100.0% | 39.2% |
| 3262527 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.94 | 88.0 | 5.86e-01 | 100.0% | 29.4% |
| 3668565 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.93 | 88.0 | 6.88e-01 | 100.0% | 55.8% |
| 2883297 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.93 | 88.0 | 5.63e-01 | 100.0% | 25.9% |
| 3781220 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.93 | 87.0 | 6.62e-01 | 100.0% | 49.5% |
| 4020804 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 86.0 | 6.30e-01 | 100.0% | 42.5% |
| 4657841 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.93 | 87.0 | 6.69e-01 | 100.0% | 51.0% |
| 2986047 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.93 | 86.0 | 8.19e-01 | 100.0% | 89.5% |
| 2755634 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.92 | 85.0 | 5.75e-01 | 100.0% | 31.5% |
| 2617573 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.90 | 84.0 | 7.75e-01 | 100.0% | 80.6% |
| 2392907 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.90 | 85.0 | 6.93e-01 | 100.0% | 60.7% |
| 1434566 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.86 | 75.0 | 7.12e-01 | 96.0% | 82.8% |
| 3594500 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 69.0 | 6.31e-01 | 100.0% | 75.0% |
| 1147974 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.61 | 51.0 | 4.28e-01 | 94.0% | 90.9% |
| 4484502 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.61 | 51.0 | 4.29e-01 | 94.0% | 97.6% |
| 3788056 | 4336.1.1.0 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like | 0.59 | 45.0 | 3.40e-01 | 82.0% | 33.6% |
| 4597482 | 102.1.1.31 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RecG_wedge | 0.57 | 42.0 | 3.92e-01 | 86.0% | 98.6% |