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CAKLQF020000002.1__CAH1073221.1__SAMEA5780031_00419__00056
Bact-VirCAKLQF020000002.1__CAH1073221.1__SAMEA5780031_00419__00056
Identity
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 239-353
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14403.12 best | CP_ATPgrasp_2 | 159.5 | 1.60e-46 | 100.0% | 31.2% |
| PF04174.19 | CP_ATPgrasp_1 | 158.8 | 2.60e-46 | 100.0% | 35.2% |
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n6xA02 | 3.40.50.11290 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.98 | 82.0 | 8.88e-01 | 85.2% | 100.0% |
| 3k1tA02 | 3.40.50.11280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutamate-cysteine ligase, N-terminal domain | 0.67 | 62.0 | 5.80e-01 | 100.0% | 89.9% |
| 3dnfA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.62 | 48.0 | 5.14e-01 | 100.0% | 96.0% |
| 3en0C00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.62 | 56.0 | 4.30e-01 | 100.0% | 56.9% |
| 3huuC02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 54.0 | 5.13e-01 | 100.0% | 82.0% |
| 4rxtA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 54.0 | 4.91e-01 | 100.0% | 97.5% |
| 2y27B01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.60 | 51.0 | 3.72e-01 | 100.0% | 32.9% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 54.0 | 4.84e-01 | 100.0% | 89.9% |
| 4w8oB00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 48.0 | 3.28e-01 | 100.0% | 24.0% |
| 3c3kA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 54.0 | 5.07e-01 | 100.0% | 89.1% |
| 3fxaA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.59 | 50.0 | 4.24e-01 | 97.4% | 55.5% |
| 4ru1A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 51.0 | 4.71e-01 | 100.0% | 73.6% |
| 3rotA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 53.0 | 5.05e-01 | 100.0% | 88.3% |
| 3d02A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 53.0 | 4.83e-01 | 100.0% | 90.8% |
| 5bq3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 53.0 | 4.78e-01 | 100.0% | 90.3% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 53.0 | 4.85e-01 | 100.0% | 91.4% |
| 3etnB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 51.0 | 4.28e-01 | 96.5% | 55.6% |
| 3ksmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 52.0 | 4.81e-01 | 100.0% | 95.3% |
| 4xwwA02 | 3.40.50.10710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase | 0.58 | 51.0 | 4.70e-01 | 96.5% | 96.0% |
| 3gv0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 53.0 | 5.05e-01 | 100.0% | 88.7% |
| 4kq9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 52.0 | 4.38e-01 | 100.0% | 83.0% |
| 3bblA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 52.0 | 4.83e-01 | 100.0% | 83.9% |
| 2o20A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 52.0 | 4.92e-01 | 100.0% | 90.5% |
| 4gnrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 51.0 | 4.72e-01 | 100.0% | 93.2% |
| 4n7bA01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.57 | 45.0 | 4.54e-01 | 100.0% | 85.3% |
| 5l3qA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 47.0 | 3.89e-01 | 96.5% | 50.5% |
| 3ke8A01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.56 | 44.0 | 4.51e-01 | 100.0% | 86.7% |
| 3nyqA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.56 | 50.0 | 3.51e-01 | 100.0% | 37.7% |
| 3klbA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.56 | 49.0 | 4.35e-01 | 94.8% | 86.4% |
| 3hs3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 48.0 | 4.60e-01 | 100.0% | 81.2% |
| 1pzmA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 50.0 | 4.40e-01 | 100.0% | 70.0% |
| 5j60A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 48.0 | 4.11e-01 | 99.1% | 72.1% |
| 4c7oA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.86e-01 | 97.4% | 53.6% |
| 3on1A00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.55 | 32.0 | 3.42e-01 | 91.3% | 65.7% |
| 4rv9A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 49.0 | 4.11e-01 | 100.0% | 86.1% |
| 4rxuA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 48.0 | 4.13e-01 | 100.0% | 78.2% |
| 4qgsA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 49.0 | 4.31e-01 | 100.0% | 88.2% |
| 4dnaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 48.0 | 3.96e-01 | 100.0% | 79.4% |
| 4k28A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.54e-01 | 100.0% | 86.4% |
| 5buqA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 48.0 | 3.34e-01 | 100.0% | 29.7% |
| 4ry9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 48.0 | 4.30e-01 | 100.0% | 77.2% |
| 1amuA02 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 4.38e-01 | 100.0% | 78.6% |
| 3imkA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 41.0 | 3.70e-01 | 87.0% | 59.5% |
| 2ywlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 46.0 | 4.12e-01 | 100.0% | 77.3% |
| 2c4kA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 47.0 | 4.51e-01 | 100.0% | 97.8% |
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.52 | 46.0 | 3.28e-01 | 98.3% | 31.4% |
| 2zskA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 45.0 | 4.64e-01 | 96.5% | 100.0% |
| 8bixC01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 47.0 | 3.69e-01 | 100.0% | 47.7% |
| 3ngxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 47.0 | 4.61e-01 | 100.0% | 92.8% |
| 1cs1A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 46.0 | 3.64e-01 | 100.0% | 47.3% |
| 6ulwA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 46.0 | 3.25e-01 | 100.0% | 48.9% |
| 4lgcA00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 46.0 | 3.21e-01 | 100.0% | 33.8% |
| 1jflA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 4.52e-01 | 97.4% | 100.0% |
| 3ff4A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 44.0 | 4.40e-01 | 94.8% | 90.1% |
| 2b9wA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 45.0 | 3.76e-01 | 99.1% | 84.8% |
| 3ri6A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 46.0 | 3.68e-01 | 100.0% | 51.1% |
| 8c9vA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 45.0 | 3.93e-01 | 100.0% | 94.5% |
| 7tlrA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 45.0 | 3.53e-01 | 99.1% | 53.5% |
| 4zn0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 44.0 | 4.03e-01 | 99.1% | 74.4% |
| 7f1uA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 45.0 | 3.57e-01 | 100.0% | 53.2% |
| 1jqdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 43.0 | 3.30e-01 | 96.5% | 87.4% |
| 6a6eA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 44.0 | 3.49e-01 | 100.0% | 53.3% |
| 4oc9A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 45.0 | 3.39e-01 | 100.0% | 47.5% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281095 | 2003.1.10.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › CP_ATPgrasp_1 | 1.00 | 88.0 | 9.22e-01 | 89.6% | 100.0% |
| 3969985 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.97 | 86.0 | 8.84e-01 | 90.4% | 96.4% |
| 3958787 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.88 | 71.0 | 7.65e-01 | 83.5% | 95.0% |
| 4190876 | 2003.1.10.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › CP_ATPgrasp_2 | 0.88 | 73.0 | 7.82e-01 | 85.2% | 98.0% |
| 4971847 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.77 | 55.0 | 6.33e-01 | 86.1% | 98.8% |
| 5000172 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.75 | 58.0 | 6.34e-01 | 89.6% | 97.9% |
| 3785034 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.65 | 34.0 | 3.32e-01 | 96.5% | 44.6% |
| 4992406 | 7597.1.1.1 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain › CW_binding_2 | 0.64 | 45.0 | 4.77e-01 | 83.5% | 80.0% |
| 3293331 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.63 | 43.0 | 4.63e-01 | 92.2% | 82.0% |
| 4548858 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.62 | 43.0 | 4.47e-01 | 87.8% | 78.1% |
| 3202057 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.60 | 46.0 | 3.93e-01 | 97.4% | 49.2% |
| 4937390 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.59 | 48.0 | 4.89e-01 | 98.3% | 87.8% |
| 4133184 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 47.0 | 4.27e-01 | 96.5% | 63.2% |
| 3971172 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.59 | 51.0 | 4.26e-01 | 100.0% | 54.5% |
| 3945524 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.59 | 53.0 | 5.10e-01 | 100.0% | 98.5% |
| 4946085 | 2007.1.7.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 | 0.58 | 48.0 | 4.33e-01 | 100.0% | 64.2% |
| 4007755 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 52.0 | 3.29e-01 | 100.0% | 51.2% |
| 3394330 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.57 | 44.0 | 4.24e-01 | 98.3% | 70.4% |
| 4331165 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 51.0 | 4.56e-01 | 97.4% | 83.7% |
| 4381552 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 50.0 | 3.95e-01 | 100.0% | 56.7% |
| 3394327 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 50.0 | 3.52e-01 | 100.0% | 40.5% |
| None | — | 0.56 | 45.0 | 3.80e-01 | 97.4% | 49.8% | |
| 5011840 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.55 | 47.0 | 3.32e-01 | 96.5% | 67.5% |
| 5052227 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.55 | 48.0 | 4.15e-01 | 100.0% | 71.6% |
| 4575598 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 49.0 | 3.82e-01 | 100.0% | 54.9% |
| None | — | 0.55 | 45.0 | 3.65e-01 | 96.5% | 45.2% | |
| 4491173 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 49.0 | 4.21e-01 | 100.0% | 66.5% |
| 4092492 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.55 | 44.0 | 4.13e-01 | 92.2% | 71.4% |
| 4076872 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.54 | 47.0 | 3.43e-01 | 97.4% | 89.4% |
| 5061975 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.54 | 48.0 | 4.16e-01 | 100.0% | 82.2% |
| None | — | 0.54 | 48.0 | 3.47e-01 | 99.1% | 89.7% | |
| 4411633 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.54 | 43.0 | 4.11e-01 | 92.2% | 71.4% |
| 4355857 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 48.0 | 3.80e-01 | 100.0% | 60.0% |
| None | — | 0.54 | 47.0 | 3.35e-01 | 97.4% | 93.4% | |
| 5020703 | 2003.1.2.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 | 0.54 | 46.0 | 3.63e-01 | 96.5% | 56.9% |
| 4030194 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.54 | 47.0 | 3.39e-01 | 100.0% | 86.2% |
| 1482007 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.54 | 48.0 | 4.49e-01 | 100.0% | 88.0% |
| 5073359 | 7584.1.1.8 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding_C_2 | 0.54 | 48.0 | 3.26e-01 | 100.0% | 27.0% |
| 1389231 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 47.0 | 4.10e-01 | 100.0% | 64.1% |
| 3271462 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 48.0 | 3.72e-01 | 100.0% | 56.5% |
| 4252456 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.53 | 45.0 | 3.13e-01 | 97.4% | 89.3% |
| 3291634 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 48.0 | 3.72e-01 | 100.0% | 51.4% |
| 4557745 | 2003.1.3.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_9 | 0.53 | 46.0 | 3.61e-01 | 100.0% | 87.6% |
| 159142 | 2003.1.2.94 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO, Pyr_redox_2 | 0.53 | 47.0 | 4.09e-01 | 100.0% | 73.9% |
| 4116400 | 2004.1.1.43 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 | 0.53 | 46.0 | 3.46e-01 | 97.4% | 41.3% |
| 5002489 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 46.0 | 3.30e-01 | 99.1% | 70.4% |
| 5001737 | 2003.1.2.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 | 0.53 | 46.0 | 3.27e-01 | 99.1% | 68.2% |
| 3838399 | 2003.1.5.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran | 0.53 | 47.0 | 3.73e-01 | 100.0% | 75.4% |
| 4963797 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 46.0 | 3.61e-01 | 100.0% | 57.0% |
| 3359550 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.52 | 47.0 | 3.35e-01 | 100.0% | 42.3% |
| 3696098 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.52 | 45.0 | 3.32e-01 | 97.4% | 78.2% |
| 5070438 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.52 | 47.0 | 3.32e-01 | 100.0% | 38.3% |
| 3987842 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 46.0 | 3.70e-01 | 100.0% | 61.3% |
| 3289443 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 45.0 | 3.27e-01 | 99.1% | 90.8% |
| 3281931 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 47.0 | 3.65e-01 | 100.0% | 53.2% |
| 3947229 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.52 | 46.0 | 3.90e-01 | 97.4% | 78.9% |
| 1203936 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 46.0 | 4.16e-01 | 100.0% | 72.8% |
| 223517 | 2003.1.14.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase | 0.52 | 40.0 | 3.73e-01 | 100.0% | 63.8% |
| 3414411 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.52 | 42.0 | 3.71e-01 | 90.4% | 85.4% |
| 5024455 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 46.0 | 3.73e-01 | 100.0% | 58.2% |
| 5006730 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.51 | 44.0 | 3.22e-01 | 99.1% | 89.0% |
| 3958702 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 45.0 | 3.27e-01 | 100.0% | 46.0% |
| 3927172 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.51 | 44.0 | 3.03e-01 | 100.0% | 92.4% |
| 4974787 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.51 | 45.0 | 3.08e-01 | 99.1% | 93.8% |
| 4998656 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.51 | 45.0 | 3.71e-01 | 100.0% | 74.5% |
| 4946022 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.51 | 45.0 | 3.39e-01 | 100.0% | 45.3% |
| 3961432 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 45.0 | 4.14e-01 | 100.0% | 96.8% |
| 3960809 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 44.0 | 3.74e-01 | 100.0% | 70.7% |
| 4940843 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.50 | 44.0 | 3.06e-01 | 100.0% | 93.2% |
| 3736412 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.50 | 43.0 | 3.27e-01 | 100.0% | 74.4% |
| 5075112 | 2003.1.3.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase | 0.50 | 44.0 | 3.00e-01 | 99.1% | 91.9% |
| 1151727 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.50 | 43.0 | 3.29e-01 | 97.4% | 47.6% |
D2
medium
residues 49-112_181-202_504-516
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.55 | 26.0 | 3.01e-01 | 81.8% | 60.3% |
D3
medium
residues 113-180_354-379
Domain cluster:
representative
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14403.12 best | CP_ATPgrasp_2 | 64.2 | 1.50e-17 | 70.2% | 17.1% |
| PF04174.19 | CP_ATPgrasp_1 | 60.0 | 2.90e-16 | 69.2% | 17.5% |
| PF04174.19 | CP_ATPgrasp_1 | 26.7 | 4.00e-06 | 34.0% | 7.8% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vydA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.64 | 37.0 | 2.53e-01 | 70.2% | 17.8% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.64 | 32.0 | 3.27e-01 | 88.3% | 47.9% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.59 | 33.0 | 3.28e-01 | 75.5% | 51.5% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.54 | 41.0 | 4.12e-01 | 97.9% | 78.4% |
| 2v6eA02 | 1.20.1440.270 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.53 | 38.0 | 3.40e-01 | 73.4% | 58.1% |
| 4uz0A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 39.0 | 4.06e-01 | 78.7% | 85.1% |
| 3q23A08 | 1.20.140.110 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.52 | 46.0 | 3.86e-01 | 94.7% | 85.1% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 42.0 | 3.65e-01 | 90.4% | 85.7% |
| 3c4wB01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.51 | 39.0 | 3.09e-01 | 80.9% | 59.4% |
| 1f16A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.51 | 39.0 | 3.16e-01 | 81.9% | 83.9% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 41.0 | 3.57e-01 | 90.4% | 83.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.96 | 93.0 | 5.96e-01 | 100.0% | 45.6% | |
| 3951173 | 206.1.3.27 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CP_ATPgrasp_2 | 0.93 | 89.0 | 5.63e-01 | 100.0% | 42.1% |
| 3970004 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.92 | 88.0 | 5.65e-01 | 100.0% | 43.6% |
| 1833712 | 206.1.3.27 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CP_ATPgrasp_2 | 0.92 | 69.0 | 5.15e-01 | 77.7% | 44.6% |
| None | — | 0.90 | 85.0 | 5.49e-01 | 100.0% | 45.3% | |
| 3809136 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.66 | 32.0 | 3.77e-01 | 77.7% | 66.2% |
| 4025349 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.57 | 39.0 | 3.49e-01 | 71.3% | 73.1% |
| 3948847 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 34.0 | 3.34e-01 | 75.5% | 55.0% |
| 4332370 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.54 | 42.0 | 3.12e-01 | 79.8% | 64.4% |
| 4932781 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 39.0 | 3.98e-01 | 94.7% | 78.7% |
| 4440427 | 5069.1.1.6 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › COX15-CtaA | 0.51 | 39.0 | 2.71e-01 | 81.9% | 31.8% |
| 3392986 | 632.1.1.19 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › RH_dom | 0.50 | 37.0 | 3.65e-01 | 81.9% | 73.0% |