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CAKLQF020000002.1__CAH1073228.1__SAMEA5780031_00421__00058
Bact-VirCAKLQF020000002.1__CAH1073228.1__SAMEA5780031_00421__00058
Identity
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 470-558
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21680.3 best | GIDA_C_1st | 64.9 | 1.30e-17 | 94.4% | 88.4% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cesA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.92 | 77.0 | 7.65e-01 | 87.6% | 88.0% |
| 3cp8D03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.82 | 76.0 | 7.15e-01 | 98.9% | 89.6% |
| 2zxiA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.79 | 65.0 | 6.36e-01 | 100.0% | 81.4% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.65 | 40.0 | 4.53e-01 | 88.8% | 85.9% |
| 3qldA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 45.0 | 3.80e-01 | 100.0% | 44.7% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 42.0 | 3.99e-01 | 80.9% | 87.6% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.57 | 43.0 | 3.49e-01 | 83.1% | 92.4% |
| 2a73B01 | 1.20.91.20 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) | 0.55 | 34.0 | 3.67e-01 | 89.9% | 75.7% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.55 | 39.0 | 4.12e-01 | 89.9% | 84.0% |
| 4ex6A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 34.0 | 3.75e-01 | 87.6% | 83.6% |
| 2r6aC01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.53 | 35.0 | 3.47e-01 | 98.9% | 62.5% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.52 | 36.0 | 3.58e-01 | 71.9% | 90.4% |
| 1sknP00 | 1.10.880.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain | 0.52 | 36.0 | 3.84e-01 | 95.5% | 87.8% |
| 2kobA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 35.0 | 3.53e-01 | 93.3% | 69.9% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 37.0 | 3.91e-01 | 88.8% | 88.5% |
| 2kz5A00 | 1.10.880.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain | 0.50 | 33.0 | 3.33e-01 | 93.3% | 64.8% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 3.44e-01 | 89.9% | 67.4% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4145177 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.92 | 87.0 | 8.55e-01 | 100.0% | 96.8% |
| 4067900 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.92 | 86.0 | 8.45e-01 | 97.8% | 94.7% |
| 4328865 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.92 | 85.0 | 8.34e-01 | 97.8% | 94.7% |
| 4580040 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.92 | 87.0 | 8.15e-01 | 100.0% | 86.7% |
| 4481831 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.91 | 83.0 | 8.35e-01 | 97.8% | 100.0% |
| 4470799 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.90 | 57.0 | 6.66e-01 | 83.1% | 87.7% |
| 4552855 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.90 | 67.0 | 7.07e-01 | 76.4% | 88.7% |
| None | — | 0.90 | 71.0 | 4.45e-01 | 82.0% | 19.0% | |
| 4500423 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.90 | 83.0 | 8.36e-01 | 97.8% | 100.0% |
| 4060059 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.90 | 71.0 | 7.69e-01 | 82.0% | 100.0% |
| 4630778 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.89 | 82.0 | 7.40e-01 | 96.6% | 94.8% |
| 4539394 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.89 | 72.0 | 7.25e-01 | 84.3% | 85.6% |
| 4295459 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.89 | 70.0 | 7.58e-01 | 82.0% | 100.0% |
| 4539198 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.89 | 71.0 | 7.13e-01 | 83.1% | 91.1% |
| 4480375 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.89 | 71.0 | 7.31e-01 | 83.1% | 87.1% |
| 4192543 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.88 | 71.0 | 7.26e-01 | 83.1% | 89.4% |
| 4573107 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.88 | 84.0 | 7.87e-01 | 100.0% | 87.6% |
| 4037037 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.88 | 82.0 | 7.86e-01 | 97.8% | 89.0% |
| 4451624 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.88 | 83.0 | 5.07e-01 | 100.0% | 19.4% |
| 4345753 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.88 | 72.0 | 7.40e-01 | 85.4% | 98.8% |
| 4133717 | 3265.1.1.0 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA | 0.88 | 61.0 | 7.03e-01 | 84.3% | 96.9% |
| 4408940 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.88 | 60.0 | 6.58e-01 | 86.5% | 84.0% |
| 4322194 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.88 | 69.0 | 7.13e-01 | 82.0% | 88.2% |
| 4384579 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.87 | 69.0 | 6.75e-01 | 82.0% | 89.5% |
| 4138390 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.87 | 70.0 | 7.18e-01 | 83.1% | 89.4% |
| 4214173 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.87 | 68.0 | 7.37e-01 | 82.0% | 100.0% |
| 4055848 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.87 | 81.0 | 7.93e-01 | 100.0% | 96.8% |
| 4668695 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 70.0 | 7.22e-01 | 85.4% | 90.6% |
| 4037678 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 68.0 | 7.02e-01 | 83.1% | 89.4% |
| 4159284 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 66.0 | 6.95e-01 | 79.8% | 91.3% |
| 4282228 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 67.0 | 6.88e-01 | 80.9% | 87.1% |
| 4210541 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 69.0 | 7.07e-01 | 84.3% | 90.6% |
| 4679576 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 71.0 | 7.10e-01 | 100.0% | 85.6% |
| 4173235 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 67.0 | 7.28e-01 | 80.9% | 98.7% |
| 4671110 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.86 | 80.0 | 7.66e-01 | 98.9% | 89.0% |
| 4070505 | 3265.1.1.0 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA | 0.86 | 54.0 | 6.26e-01 | 83.1% | 87.7% |
| 4312796 | 3265.1.1.0 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA | 0.86 | 56.0 | 6.80e-01 | 80.9% | 100.0% |
| 4503541 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.85 | 80.0 | 7.54e-01 | 100.0% | 90.5% |
| 3387271 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.85 | 68.0 | 6.99e-01 | 84.3% | 90.6% |
| 4075084 | 3265.1.1.0 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA | 0.85 | 67.0 | 6.84e-01 | 82.0% | 88.2% |
| 4680538 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.85 | 68.0 | 7.02e-01 | 84.3% | 90.6% |
| 4396318 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.85 | 76.0 | 7.32e-01 | 96.6% | 98.0% |
| 4118369 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.85 | 65.0 | 6.83e-01 | 79.8% | 88.7% |
| 4347756 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.85 | 67.0 | 6.91e-01 | 83.1% | 89.4% |
| 4503608 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.84 | 69.0 | 6.71e-01 | 85.4% | 89.5% |
| 4119549 | 3265.1.1.0 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA | 0.84 | 62.0 | 6.88e-01 | 96.6% | 97.1% |
| 4632897 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.84 | 76.0 | 7.34e-01 | 98.9% | 90.0% |
| 4163441 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.84 | 66.0 | 7.14e-01 | 82.0% | 100.0% |
| 4158121 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.83 | 67.0 | 7.06e-01 | 85.4% | 93.8% |
| 4559666 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.83 | 74.0 | 7.56e-01 | 100.0% | 98.8% |
| 4154251 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.83 | 69.0 | 6.93e-01 | 87.6% | 87.8% |
| 4480216 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.83 | 61.0 | 6.79e-01 | 75.3% | 100.0% |
| 4604814 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.83 | 69.0 | 6.76e-01 | 87.6% | 89.5% |
| 4410030 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.83 | 66.0 | 6.75e-01 | 83.1% | 89.4% |
| 4249724 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.82 | 70.0 | 6.88e-01 | 89.9% | 91.6% |
| 4231697 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.82 | 75.0 | 7.21e-01 | 98.9% | 89.0% |
| 4042016 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.81 | 68.0 | 6.79e-01 | 87.6% | 87.8% |
| 4099978 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.81 | 65.0 | 6.65e-01 | 84.3% | 90.6% |
| 4127393 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.81 | 67.0 | 6.86e-01 | 87.6% | 97.6% |
| 3901021 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.80 | 66.0 | 6.91e-01 | 87.6% | 100.0% |
| 4473774 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.79 | 62.0 | 6.21e-01 | 82.0% | 88.9% |
| 4272196 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.79 | 67.0 | 7.01e-01 | 89.9% | 100.0% |
| 3171873 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.79 | 73.0 | 7.14e-01 | 100.0% | 97.9% |
| 3862492 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.79 | 65.0 | 6.42e-01 | 88.8% | 88.4% |
| 4153619 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.78 | 62.0 | 6.19e-01 | 84.3% | 91.1% |
| 4501081 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.78 | 55.0 | 6.31e-01 | 74.2% | 100.0% |
| 4439300 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.76 | 69.0 | 6.65e-01 | 98.9% | 88.0% |
| 4229089 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.75 | 63.0 | 3.86e-01 | 92.1% | 15.3% |
| 4365217 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.74 | 65.0 | 6.65e-01 | 100.0% | 100.0% |
| 4441096 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.63 | 36.0 | 4.16e-01 | 80.9% | 80.0% |
| 3483711 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 33.0 | 3.83e-01 | 80.9% | 85.5% |
| 3401196 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.55 | 38.0 | 3.68e-01 | 87.6% | 61.0% |
| 4017637 | 279.1.1.1 ↗ | a+b complex topology › LDH C-terminal domain-like › LDH C-terminal domain-like › LDH C-terminal domain-like › Ldh_1_C | 0.55 | 42.0 | 3.41e-01 | 94.4% | 42.9% |
| 3326234 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.52 | 40.0 | 3.81e-01 | 95.5% | 68.2% |
| 3456236 | 7095.1.1.1 ↗ | alpha arrays › C-terminal domain of DEAH helicase DHX37 › C-terminal domain of DEAH helicase DHX37 › C-terminal domain of DEAH helicase DHX37 › DHX37_C | 0.51 | 42.0 | 4.20e-01 | 92.1% | 93.7% |
D2
high
residues 560-625
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13932.16 best | SAM_GIDA_C | 79.4 | 2.30e-22 | 100.0% | 71.3% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zxiA04 | 1.10.150.570 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GidA associated domain, C-terminal subdomain | 0.96 | 75.0 | 8.35e-01 | 80.3% | 100.0% |
| 8b0qA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.83 | 57.0 | 5.97e-01 | 71.2% | 90.0% |
| 5tt5A05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.77 | 57.0 | 5.44e-01 | 78.8% | 79.2% |
| 2w9mA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.72 | 56.0 | 5.56e-01 | 84.8% | 95.6% |
| 3bzcA04 | 1.10.150.310 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tex RuvX-like domain-like | 0.71 | 56.0 | 4.49e-01 | 86.4% | 100.0% |
| 5b66U01 | 1.10.150.320 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Photosystem II 12 kDa extrinsic protein | 0.71 | 51.0 | 4.70e-01 | 77.3% | 67.4% |
| 1dgsA06 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.70 | 53.0 | 4.97e-01 | 81.8% | 77.1% |
| 1doqA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.70 | 53.0 | 5.26e-01 | 81.8% | 88.4% |
| 2dgzA01 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.70 | 50.0 | 4.56e-01 | 75.8% | 70.8% |
| 3osnA03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.68 | 48.0 | 4.58e-01 | 74.2% | 71.4% |
| 1u9lB00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.68 | 52.0 | 5.18e-01 | 84.8% | 94.3% |
| 4is7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.68 | 50.0 | 4.96e-01 | 81.8% | 88.9% |
| 2rrdA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.67 | 46.0 | 4.01e-01 | 71.2% | 63.4% |
| 2zgyA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 53.0 | 4.19e-01 | 87.9% | 67.9% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 46.0 | 3.59e-01 | 72.7% | 96.6% |
| 2q0zX02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.66 | 46.0 | 4.80e-01 | 72.7% | 96.6% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.66 | 39.0 | 3.60e-01 | 86.4% | 48.1% |
| 2bgwA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.66 | 49.0 | 4.76e-01 | 81.8% | 77.0% |
| 1ucvA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.64 | 50.0 | 4.77e-01 | 87.9% | 85.2% |
| 2j49A00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.62 | 48.0 | 3.79e-01 | 83.3% | 85.1% |
| 3crdA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 48.0 | 4.27e-01 | 90.9% | 96.0% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.60 | 44.0 | 4.03e-01 | 93.9% | 60.0% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 4.27e-01 | 86.4% | 92.9% |
| 2i3fA00 | 1.10.3520.10 | Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein | 0.58 | 46.0 | 3.36e-01 | 90.9% | 40.3% |
| 1r4gA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.58 | 42.0 | 4.66e-01 | 100.0% | 98.1% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.89e-01 | 78.8% | 95.1% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.57 | 46.0 | 3.28e-01 | 93.9% | 71.5% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.94e-01 | 74.2% | 75.4% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 4.42e-01 | 84.8% | 96.8% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.55 | 45.0 | 4.35e-01 | 98.5% | 94.9% |
| 2aqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 37.0 | 3.44e-01 | 71.2% | 70.0% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 37.0 | 3.31e-01 | 71.2% | 67.7% |
| 2n80A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 44.0 | 4.06e-01 | 98.5% | 79.8% |
| 2nriB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.62e-01 | 81.8% | 91.3% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.53 | 44.0 | 4.31e-01 | 93.9% | 84.5% |
| 2o71A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 44.0 | 4.05e-01 | 97.0% | 89.0% |
| 3f6oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.36e-01 | 74.2% | 58.2% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.52 | 38.0 | 3.14e-01 | 83.3% | 71.6% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.50 | 45.0 | 3.39e-01 | 100.0% | 79.0% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 1.00 | 81.0 | 4.79e-01 | 83.3% | 14.7% | |
| 4253032 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.99 | 96.0 | 9.12e-01 | 100.0% | 88.0% |
| None | — | 0.99 | 86.0 | 5.09e-01 | 89.4% | 15.4% | |
| 4185359 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.99 | 96.0 | 8.59e-01 | 100.0% | 77.6% |
| 3274916 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.99 | 79.0 | 8.73e-01 | 83.3% | 100.0% |
| 4064770 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.99 | 86.0 | 8.46e-01 | 90.9% | 85.7% |
| 4523318 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.98 | 95.0 | 8.74e-01 | 100.0% | 82.5% |
| 4591215 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.98 | 92.0 | 8.35e-01 | 100.0% | 77.4% |
| 4002030 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.98 | 83.0 | 4.85e-01 | 87.9% | 14.0% |
| None | — | 0.98 | 80.0 | 4.56e-01 | 84.8% | 11.2% | |
| 4205355 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.97 | 93.0 | 8.83e-01 | 100.0% | 88.0% |
| 3579187 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.97 | 83.0 | 7.88e-01 | 89.4% | 78.7% |
| 4660870 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.97 | 82.0 | 8.00e-01 | 87.9% | 82.9% |
| 4204405 | 170.1.1.33 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › SAM_GIDA_C | 0.97 | 85.0 | 8.28e-01 | 90.9% | 85.7% |
| None | — | 0.97 | 79.0 | 4.67e-01 | 84.8% | 14.2% | |
| 4267213 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.96 | 91.0 | 8.22e-01 | 100.0% | 77.6% |
| 3397200 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.96 | 82.0 | 7.79e-01 | 89.4% | 80.0% |
| 4451624 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.95 | 76.0 | 4.40e-01 | 83.3% | 11.6% |
| 4020265 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.95 | 80.0 | 7.19e-01 | 87.9% | 68.2% |
| 4024949 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.95 | 81.0 | 8.53e-01 | 89.4% | 100.0% |
| 4347149 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.94 | 85.0 | 8.17e-01 | 97.0% | 85.1% |
| 4085482 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.94 | 80.0 | 8.43e-01 | 89.4% | 98.3% |
| 3424642 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.94 | 88.0 | 7.65e-01 | 100.0% | 69.5% |
| 3781871 | 102.1.1.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › GIDA_C | 0.89 | 73.0 | 7.16e-01 | 86.4% | 82.9% |
| 4205866 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.86 | 59.0 | 5.99e-01 | 71.2% | 87.7% |
| 4058889 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.81 | 60.0 | 6.23e-01 | 78.8% | 100.0% |
| 3283661 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.80 | 59.0 | 5.97e-01 | 77.3% | 87.7% |
| 3410797 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 57.0 | 5.92e-01 | 75.8% | 100.0% |
| 4385351 | 102.1.1.3 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH | 0.79 | 56.0 | 5.87e-01 | 75.8% | 100.0% |
| 4209900 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.76 | 54.0 | 5.43e-01 | 74.2% | 89.2% |
| 4285151 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.75 | 59.0 | 6.02e-01 | 84.8% | 95.4% |
| 4945738 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 51.0 | 5.03e-01 | 71.2% | 77.1% |
| None | — | 0.74 | 52.0 | 5.33e-01 | 74.2% | 87.3% | |
| 3962074 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 55.0 | 5.30e-01 | 80.3% | 81.3% |
| 4037683 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 53.0 | 5.36e-01 | 77.3% | 100.0% |
| 4999572 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.73 | 54.0 | 5.60e-01 | 78.8% | 95.0% |
| 4932604 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 55.0 | 5.18e-01 | 81.8% | 76.2% |
| 4975986 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 59.0 | 5.85e-01 | 89.4% | 100.0% |
| 4945133 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 53.0 | 5.38e-01 | 78.8% | 98.4% |
| 5004994 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.71 | 55.0 | 5.67e-01 | 84.8% | 98.3% |
| 5038945 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.71 | 51.0 | 5.36e-01 | 78.8% | 98.3% |
| 4977890 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.70 | 51.0 | 5.21e-01 | 78.8% | 87.7% |
| 4987624 | 102.1.1.119 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF4332 | 0.70 | 52.0 | 5.00e-01 | 80.3% | 88.0% |
| 3704115 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 56.0 | 5.51e-01 | 87.9% | 85.7% |
| 3970060 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 55.0 | 5.46e-01 | 87.9% | 95.7% |
| 4948124 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 57.0 | 5.56e-01 | 93.9% | 89.3% |
| 5040613 | 102.1.1.119 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF4332 | 0.69 | 54.0 | 4.25e-01 | 84.8% | 90.0% |
| 3785934 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.69 | 49.0 | 4.40e-01 | 75.8% | 65.3% |
| 3711184 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 54.0 | 5.62e-01 | 84.8% | 98.3% |
| 4086283 | 102.1.1.23 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH | 0.69 | 50.0 | 4.84e-01 | 77.3% | 73.3% |
| 4597170 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.68 | 52.0 | 5.17e-01 | 83.3% | 88.6% |
| 5018343 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.68 | 49.0 | 5.07e-01 | 75.8% | 91.7% |
| None | — | 0.68 | 49.0 | 5.07e-01 | 75.8% | 91.7% | |
| 3668692 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.67 | 49.0 | 4.98e-01 | 78.8% | 87.7% |
| 3286457 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 50.0 | 5.17e-01 | 81.8% | 96.7% |
| 3962227 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.67 | 48.0 | 4.80e-01 | 77.3% | 81.4% |
| 5043828 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 53.0 | 3.28e-01 | 87.9% | 20.5% |
| 4597482 | 102.1.1.31 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RecG_wedge | 0.67 | 53.0 | 5.21e-01 | 86.4% | 95.7% |
| 5048865 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.67 | 51.0 | 4.93e-01 | 84.8% | 89.3% |
| 364538 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.66 | 46.0 | 4.66e-01 | 74.2% | 83.3% |
| 4063201 | 102.1.1.100 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF29713 | 0.65 | 49.0 | 4.84e-01 | 84.8% | 98.6% |
| 3174667 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.64 | 47.0 | 4.84e-01 | 78.8% | 95.0% |
| 3249714 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.64 | 48.0 | 4.59e-01 | 83.3% | 96.2% |
| 3446679 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.64 | 46.0 | 4.74e-01 | 77.3% | 95.0% |
| 3589786 | 102.1.1.31 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RecG_wedge | 0.63 | 49.0 | 4.84e-01 | 86.4% | 92.9% |
| 3607618 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.63 | 46.0 | 4.47e-01 | 78.8% | 74.7% |
| 4031297 | 102.1.1.31 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RecG_wedge | 0.63 | 48.0 | 4.80e-01 | 86.4% | 97.1% |
| 3397887 | 101.1.1.28 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SWIRM | 0.59 | 40.0 | 3.99e-01 | 71.2% | 90.0% |
| 161545 | 631.1.1.1 ↗ | alpha arrays › Glycolipid transfer protein, GLTP › Glycolipid transfer protein, GLTP › Glycolipid transfer protein, GLTP › GLTP | 0.58 | 46.0 | 3.36e-01 | 90.9% | 40.3% |
| 4970542 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.57 | 43.0 | 4.39e-01 | 83.3% | 93.8% |
| 4361149 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 38.0 | 3.30e-01 | 72.7% | 62.9% |
D3
medium
residues 1-199_342-469
Domain cluster:
rep: putative_GMC-type_oxidoreductase__YP_003986619__Acanthamoeba_polyphaga_mimivirus__212035__D47-78_126-183_227-350_507-563
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01134.29 best | GIDA | 260.2 | 4.80e-77 | 59.6% | 49.6% |
| PF12831.14 | FAD_oxidored | 35.3 | 1.20e-08 | 52.0% | 34.5% |
| PF01134.29 | GIDA | 81.4 | 1.00e-22 | 18.0% | 14.6% |
| PF00890.31 | FAD_binding_2 | 22.1 | 1.10e-04 | 14.7% | 7.5% |
CATH (98)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e57B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.98 | 94.0 | 9.53e-01 | 96.6% | 100.0% |
| 2culA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.90 | 62.0 | 7.52e-01 | 76.5% | 100.0% |
| 4zn0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.88 | 44.0 | 6.48e-01 | 77.4% | 100.0% |
| 1hyuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.87 | 48.0 | 6.58e-01 | 76.8% | 98.4% |
| 3ctyB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.85 | 48.0 | 6.50e-01 | 78.0% | 100.0% |
| 2ywlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.85 | 45.0 | 6.33e-01 | 76.8% | 100.0% |
| 5j60A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.84 | 51.0 | 6.62e-01 | 98.2% | 99.5% |
| 3fbsB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.84 | 49.0 | 6.51e-01 | 77.4% | 100.0% |
| 5niiB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.84 | 47.0 | 6.33e-01 | 76.8% | 97.3% |
| 3g5sA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.83 | 70.0 | 7.63e-01 | 95.4% | 100.0% |
| 4ntcA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.83 | 49.0 | 6.30e-01 | 78.0% | 95.0% |
| 3ab1B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.81 | 52.0 | 6.55e-01 | 97.2% | 99.5% |
| 4dgkA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.81 | 40.0 | 5.91e-01 | 76.5% | 100.0% |
| 1l9fA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.81 | 46.0 | 6.16e-01 | 85.3% | 97.9% |
| 1mo9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.81 | 43.0 | 5.46e-01 | 78.3% | 83.3% |
| 3kkjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.81 | 39.0 | 5.81e-01 | 77.4% | 100.0% |
| 4fk1A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.81 | 46.0 | 6.20e-01 | 77.1% | 99.5% |
| 3kd9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.79 | 41.0 | 5.84e-01 | 85.9% | 99.4% |
| 4c3xA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.79 | 60.0 | 5.77e-01 | 76.8% | 100.0% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.79 | 59.0 | 6.68e-01 | 76.5% | 100.0% |
| 3oz2A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.79 | 56.0 | 6.54e-01 | 87.2% | 98.3% |
| 1ps9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.78 | 35.0 | 5.39e-01 | 74.9% | 96.6% |
| 1y56B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.78 | 53.0 | 6.43e-01 | 86.5% | 100.0% |
| 2bs2A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.78 | 60.0 | 6.06e-01 | 78.3% | 98.5% |
| 1o5wA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.78 | 47.0 | 6.11e-01 | 82.0% | 100.0% |
| 1q1rA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.78 | 46.0 | 6.03e-01 | 85.9% | 99.0% |
| 4h4rA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.77 | 44.0 | 5.88e-01 | 85.9% | 98.9% |
| 2yg5A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.77 | 46.0 | 6.02e-01 | 77.7% | 100.0% |
| 3e1tA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.77 | 46.0 | 5.30e-01 | 88.1% | 77.9% |
| 2olnA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.77 | 52.0 | 6.30e-01 | 85.3% | 100.0% |
| 2jaeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.77 | 42.0 | 5.65e-01 | 77.1% | 95.7% |
| 1bf3A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.76 | 54.0 | 6.26e-01 | 86.5% | 96.7% |
| 3nlcA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.76 | 54.0 | 6.28e-01 | 77.1% | 95.9% |
| 4yshA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.76 | 52.0 | 6.29e-01 | 85.3% | 100.0% |
| 1d4cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.76 | 58.0 | 5.91e-01 | 76.8% | 95.6% |
| 3if9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.76 | 52.0 | 6.26e-01 | 85.0% | 100.0% |
| 2gqfA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.75 | 57.0 | 6.51e-01 | 78.0% | 100.0% |
| 4x9mA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.75 | 50.0 | 6.03e-01 | 97.2% | 96.9% |
| 2rghA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.75 | 52.0 | 5.96e-01 | 97.9% | 91.6% |
| 4k22B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.75 | 55.0 | 6.37e-01 | 91.4% | 100.0% |
| 5ttjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 50.0 | 6.11e-01 | 77.4% | 100.0% |
| 1sezA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 41.0 | 5.66e-01 | 77.1% | 100.0% |
| 4wctA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 51.0 | 5.99e-01 | 84.4% | 95.8% |
| 2vvlG01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 51.0 | 5.74e-01 | 76.5% | 88.3% |
| 1d5tA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 40.0 | 5.52e-01 | 94.8% | 100.0% |
| 3dmeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 48.0 | 5.92e-01 | 77.7% | 100.0% |
| 1i8tA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 43.0 | 5.68e-01 | 77.4% | 100.0% |
| 2vouB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 52.0 | 6.09e-01 | 87.8% | 98.8% |
| 4ywoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 47.0 | 5.84e-01 | 87.8% | 99.1% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 48.0 | 5.94e-01 | 82.6% | 100.0% |
| 3aljA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 47.0 | 5.78e-01 | 92.4% | 97.7% |
| 2bi7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.72 | 44.0 | 5.66e-01 | 77.4% | 99.5% |
| 4opcA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 61.0 | 5.40e-01 | 89.3% | 85.2% |
| 1lvlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 46.0 | 5.76e-01 | 88.4% | 100.0% |
| 2e5vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 57.0 | 6.15e-01 | 82.6% | 100.0% |
| 4m52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 47.0 | 5.78e-01 | 83.8% | 100.0% |
| 2qcuB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 48.0 | 5.69e-01 | 96.9% | 97.8% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 47.0 | 5.72e-01 | 87.2% | 98.7% |
| 4dnaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 46.0 | 5.70e-01 | 87.8% | 100.0% |
| 1kdgA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 52.0 | 5.22e-01 | 77.1% | 100.0% |
| 1onfA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 43.0 | 5.46e-01 | 87.2% | 100.0% |
| 6bz0D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 47.0 | 5.68e-01 | 87.5% | 100.0% |
| 3awiA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 50.0 | 5.59e-01 | 84.4% | 93.4% |
| 2qa1A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 59.0 | 6.22e-01 | 91.7% | 99.3% |
| 4j31A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 56.0 | 5.43e-01 | 85.9% | 97.8% |
| 3rhaA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 52.0 | 4.59e-01 | 78.9% | 99.1% |
| 4a9wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 51.0 | 5.17e-01 | 77.7% | 100.0% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 59.0 | 5.33e-01 | 90.8% | 91.8% |
| 5nahA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 56.0 | 5.37e-01 | 86.5% | 98.4% |
| 1vg0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 42.0 | 5.26e-01 | 96.0% | 99.5% |
| 1cboA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 51.0 | 5.12e-01 | 78.3% | 100.0% |
| 2hqmA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 46.0 | 5.51e-01 | 88.1% | 100.0% |
| 5uaoC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 59.0 | 5.01e-01 | 93.3% | 99.4% |
| 1h6vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 46.0 | 5.54e-01 | 82.6% | 100.0% |
| 2xdoD00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 55.0 | 5.30e-01 | 85.9% | 96.7% |
| 1c0pA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 39.0 | 4.97e-01 | 77.1% | 97.0% |
| 5x68A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 54.0 | 5.29e-01 | 86.2% | 97.2% |
| 4hb9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 54.0 | 5.12e-01 | 85.6% | 97.3% |
| 6y48D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 53.0 | 5.52e-01 | 89.3% | 93.0% |
| 6frlA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 54.0 | 4.66e-01 | 88.7% | 88.0% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 52.0 | 5.52e-01 | 92.7% | 95.3% |
| 5eowA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 56.0 | 5.49e-01 | 93.9% | 100.0% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.58 | 50.0 | 4.44e-01 | 90.2% | 89.6% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 51.0 | 4.61e-01 | 93.0% | 97.5% |
| 3l6dA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 28.0 | 3.87e-01 | 83.8% | 98.2% |
| 3g0oA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 28.0 | 3.87e-01 | 83.2% | 98.2% |
| 3k96A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 31.0 | 4.04e-01 | 85.3% | 98.9% |
| 1pgjA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 31.0 | 4.00e-01 | 85.6% | 100.0% |
| 2uyyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 28.0 | 3.76e-01 | 83.8% | 96.4% |
| 1zcjA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 30.0 | 3.89e-01 | 83.8% | 97.8% |
| 2wtbA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 30.0 | 3.92e-01 | 85.3% | 100.0% |
| 4om8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 30.0 | 3.91e-01 | 85.6% | 99.5% |
| 3kd9A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 27.0 | 3.10e-01 | 90.2% | 67.1% |
| 6dv2G02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 30.0 | 3.86e-01 | 84.4% | 99.5% |
| 4e12A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 30.0 | 3.86e-01 | 85.6% | 97.9% |
| 3k6jA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 30.0 | 3.51e-01 | 85.9% | 80.0% |
| 3adoA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 29.0 | 3.85e-01 | 83.8% | 100.0% |
| 1f14A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 30.0 | 3.85e-01 | 87.5% | 98.5% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 1.00 | 97.0 | 9.41e-01 | 98.5% | 91.3% | |
| None | — | 1.00 | 99.0 | 9.62e-01 | 100.0% | 94.0% | |
| None | — | 1.00 | 97.0 | 8.88e-01 | 98.5% | 81.0% | |
| None | — | 1.00 | 96.0 | 9.03e-01 | 97.2% | 85.3% | |
| 3964984 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 1.00 | 99.0 | 9.34e-01 | 100.0% | 88.9% |
| None | — | 1.00 | 96.0 | 8.43e-01 | 97.6% | 100.0% | |
| None | — | 1.00 | 94.0 | 8.67e-01 | 95.7% | 79.7% | |
| None | — | 0.99 | 97.0 | 8.51e-01 | 99.1% | 100.0% | |
| 4561078 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.99 | 98.0 | 9.56e-01 | 100.0% | 94.0% |
| None | — | 0.99 | 97.0 | 8.31e-01 | 99.1% | 95.7% | |
| 4451624 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.99 | 97.0 | 8.22e-01 | 98.5% | 68.8% |
| 4367859 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.99 | 97.0 | 9.42e-01 | 99.4% | 94.4% |
| 4229089 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.99 | 97.0 | 7.90e-01 | 99.1% | 84.9% |
| None | — | 0.99 | 97.0 | 9.04e-01 | 99.1% | 84.6% | |
| None | — | 0.99 | 98.0 | 8.94e-01 | 100.0% | 82.0% | |
| 4620603 | 2003.1.2.11 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.99 | 98.0 | 8.34e-01 | 100.0% | 95.3% |
| None | — | 0.99 | 96.0 | 8.42e-01 | 98.2% | 100.0% | |
| None | — | 0.99 | 93.0 | 8.05e-01 | 94.8% | 97.8% | |
| None | — | 0.99 | 94.0 | 9.51e-01 | 96.6% | 97.5% | |
| 3274919 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.99 | 95.0 | 7.99e-01 | 97.6% | 94.1% |
| None | — | 0.99 | 98.0 | 8.29e-01 | 100.0% | 97.7% | |
| None | — | 0.99 | 95.0 | 9.53e-01 | 96.9% | 100.0% | |
| 3200227 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.99 | 96.0 | 9.34e-01 | 98.5% | 95.1% |
| None | — | 0.99 | 97.0 | 8.35e-01 | 100.0% | 99.8% | |
| 4512061 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.98 | 97.0 | 8.38e-01 | 100.0% | 97.2% |
| 4098926 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.98 | 97.0 | 8.23e-01 | 100.0% | 94.6% |
| None | — | 0.98 | 94.0 | 9.28e-01 | 96.9% | 100.0% | |
| None | — | 0.98 | 90.0 | 7.50e-01 | 93.0% | 85.0% | |
| 4002030 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.98 | 96.0 | 8.63e-01 | 99.1% | 80.2% |
| 4030234 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.98 | 96.0 | 9.02e-01 | 99.1% | 100.0% |
| None | — | 0.98 | 95.0 | 8.15e-01 | 97.9% | 100.0% | |
| 4507888 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.98 | 96.0 | 9.18e-01 | 99.1% | 100.0% |
| 4329658 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.98 | 96.0 | 8.16e-01 | 100.0% | 99.6% |
| None | — | 0.97 | 96.0 | 8.32e-01 | 99.4% | 99.6% | |
| 4310354 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.96 | 91.0 | 9.36e-01 | 98.2% | 100.0% |
| None | — | 0.94 | 92.0 | 9.18e-01 | 99.4% | 98.8% | |
| 9287 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.90 | 62.0 | 7.52e-01 | 76.5% | 100.0% |
| 4351107 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.84 | 70.0 | 7.66e-01 | 94.2% | 100.0% |
| 4597942 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.84 | 71.0 | 7.71e-01 | 94.5% | 99.6% |
| None | — | 0.83 | 73.0 | 7.69e-01 | 97.9% | 98.0% | |
| 4661244 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.83 | 73.0 | 7.73e-01 | 96.3% | 99.0% |
| 4067755 | 2003.1.2.59 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA, NAD_binding_8 | 0.82 | 72.0 | 7.68e-01 | 95.7% | 100.0% |
| 4360448 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.82 | 70.0 | 7.58e-01 | 93.9% | 100.0% |
| 4093895 | 2003.1.2.11 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.82 | 71.0 | 7.56e-01 | 95.4% | 99.3% |
| None | — | 0.82 | 70.0 | 7.49e-01 | 95.4% | 99.3% | |
| None | — | 0.82 | 72.0 | 7.60e-01 | 95.4% | 99.3% | |
| 4381216 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.82 | 71.0 | 7.60e-01 | 93.9% | 100.0% |
| None | — | 0.81 | 72.0 | 7.60e-01 | 95.4% | 99.3% | |
| 4331304 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.81 | 72.0 | 7.56e-01 | 95.4% | 100.0% |
| None | — | 0.80 | 72.0 | 7.50e-01 | 97.6% | 100.0% | |
| 4249336 | 2003.1.2.59 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA, NAD_binding_8 | 0.79 | 72.0 | 7.47e-01 | 94.2% | 100.0% |
| 4885952 | 2003.1.2.59 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA, NAD_binding_8 | 0.78 | 72.0 | 7.40e-01 | 94.5% | 98.4% |
| 4118819 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.78 | 73.0 | 7.49e-01 | 97.2% | 99.7% |
| 4638190 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.77 | 71.0 | 7.30e-01 | 94.8% | 98.7% |
| 5022345 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.75 | 57.0 | 6.23e-01 | 88.7% | 92.0% |
| 3658995 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.73 | 45.0 | 5.77e-01 | 85.3% | 99.5% |
| 4962074 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.72 | 55.0 | 5.74e-01 | 77.4% | 100.0% |
| 5076962 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.71 | 63.0 | 5.31e-01 | 91.4% | 93.7% |
| 4965107 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.71 | 59.0 | 5.79e-01 | 89.3% | 80.0% |
| 3789359 | 2003.1.2.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › SE | 0.71 | 61.0 | 5.78e-01 | 89.6% | 86.5% |
| None | — | 0.70 | 60.0 | 5.80e-01 | 89.0% | 86.8% | |
| 2774789 | 2003.1.2.186 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Thi4, PF26311 | 0.69 | 58.0 | 5.19e-01 | 85.9% | 85.4% |
| 3837632 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.69 | 57.0 | 6.15e-01 | 93.0% | 98.6% |
| None | — | 0.69 | 60.0 | 5.66e-01 | 89.9% | 83.4% | |
| 3819766 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.69 | 62.0 | 5.22e-01 | 93.0% | 92.7% |
| 3300984 | 2003.1.3.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO, Pyr_redox_2 | 0.69 | 56.0 | 5.37e-01 | 84.1% | 97.3% |
| 5034033 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.69 | 56.0 | 5.78e-01 | 88.4% | 87.3% |
| 3702140 | 2003.1.2.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › SE | 0.68 | 59.0 | 5.30e-01 | 89.0% | 78.4% |
| 3345410 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.68 | 56.0 | 5.37e-01 | 84.4% | 97.9% |
| 3324054 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.68 | 60.0 | 5.63e-01 | 89.9% | 81.3% |
| 5060147 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.68 | 60.0 | 5.45e-01 | 90.8% | 100.0% |
| 4983349 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.68 | 59.0 | 5.53e-01 | 89.0% | 98.4% |
| 4927776 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.68 | 59.0 | 5.51e-01 | 89.9% | 97.9% |
| 3615159 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.67 | 58.0 | 5.17e-01 | 89.0% | 75.5% |
| 5068473 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.67 | 59.0 | 5.46e-01 | 89.3% | 93.2% |
| 4021728 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.67 | 62.0 | 5.31e-01 | 96.0% | 98.4% |
| 3595218 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.67 | 58.0 | 5.23e-01 | 89.0% | 77.2% |
| 4019079 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.67 | 56.0 | 4.98e-01 | 86.2% | 94.5% |
| 5017790 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.67 | 58.0 | 5.26e-01 | 89.0% | 95.5% |
| 4484607 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.67 | 55.0 | 5.10e-01 | 84.4% | 97.8% |
| 4471334 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.67 | 62.0 | 5.64e-01 | 98.2% | 99.5% |
| 4655985 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.66 | 57.0 | 5.63e-01 | 89.6% | 86.9% |
| 3690966 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.66 | 61.0 | 5.34e-01 | 95.7% | 99.6% |
| 4931847 | 2003.1.2.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lycopene_cycl | 0.66 | 57.0 | 5.43e-01 | 89.3% | 93.2% |
| 5061114 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.66 | 55.0 | 5.34e-01 | 85.6% | 93.2% |
| None | — | 0.66 | 58.0 | 5.46e-01 | 91.4% | 98.7% | |
| 4998760 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.65 | 55.0 | 5.42e-01 | 87.2% | 98.9% |
| 3670208 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.65 | 60.0 | 5.39e-01 | 95.7% | 99.8% |
| 5072082 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.65 | 61.0 | 5.33e-01 | 96.6% | 96.5% |
| 5001155 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.64 | 56.0 | 5.53e-01 | 89.9% | 100.0% |
| 3269433 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.64 | 54.0 | 4.92e-01 | 86.5% | 92.0% |
| 4967588 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.64 | 56.0 | 5.30e-01 | 89.9% | 93.8% |
| 5057816 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.63 | 55.0 | 5.42e-01 | 90.2% | 100.0% |
| None | — | 0.63 | 57.0 | 5.59e-01 | 92.7% | 100.0% | |
| 4940922 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.63 | 54.0 | 5.12e-01 | 89.0% | 93.8% |
| 4403749 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.62 | 57.0 | 4.82e-01 | 95.4% | 99.6% |
| None | — | 0.61 | 49.0 | 4.79e-01 | 82.6% | 100.0% | |
| 5041290 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.60 | 56.0 | 5.25e-01 | 97.9% | 100.0% |
| 3600535 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.60 | 56.0 | 4.75e-01 | 98.2% | 93.3% |
D4
medium
residues 200-341
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01134.29 best | GIDA | 183.1 | 1.30e-53 | 100.0% | 36.1% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cp2A02 | 2.40.30.260 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.94 | 65.0 | 7.85e-01 | 97.9% | 100.0% |
| 2zxiD02 | 2.40.30.260 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.91 | 82.0 | 8.58e-01 | 97.9% | 100.0% |
| 2xhcA01 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.57 | 32.0 | 3.70e-01 | 100.0% | 78.9% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.52 | 25.0 | 3.09e-01 | 93.0% | 71.4% |
| 3lnnA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.52 | 26.0 | 3.17e-01 | 93.0% | 72.5% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4620603 | 2003.1.2.11 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 1.00 | 84.0 | 5.50e-01 | 100.0% | 25.7% |
| None | — | 1.00 | 84.0 | 5.57e-01 | 100.0% | 27.2% | |
| None | — | 1.00 | 84.0 | 5.58e-01 | 100.0% | 27.5% | |
| None | — | 0.99 | 84.0 | 5.50e-01 | 100.0% | 25.7% | |
| None | — | 0.99 | 84.0 | 5.52e-01 | 100.0% | 26.2% | |
| 4229089 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.98 | 82.0 | 5.23e-01 | 100.0% | 22.6% |
| 4098926 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.98 | 82.0 | 5.38e-01 | 100.0% | 25.2% |
| None | — | 0.98 | 82.0 | 5.39e-01 | 100.0% | 25.7% | |
| None | — | 0.98 | 84.0 | 5.57e-01 | 100.0% | 27.6% | |
| None | — | 0.98 | 96.0 | 6.33e-01 | 100.0% | 31.5% | |
| None | — | 0.98 | 84.0 | 5.43e-01 | 100.0% | 24.8% | |
| 3810945 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.97 | 95.0 | 9.48e-01 | 100.0% | 97.9% |
| 4329658 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.97 | 95.0 | 6.23e-01 | 100.0% | 31.0% |
| 4196335 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.97 | 92.0 | 9.31e-01 | 97.2% | 98.6% |
| 4352800 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.97 | 91.0 | 8.68e-01 | 96.5% | 100.0% |
| None | — | 0.96 | 82.0 | 5.49e-01 | 100.0% | 27.6% | |
| 4554422 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.95 | 91.0 | 9.23e-01 | 97.9% | 100.0% |
| 4594386 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.95 | 90.0 | 9.13e-01 | 100.0% | 98.6% |
| 3274919 | 2003.1.2.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA | 0.95 | 81.0 | 5.29e-01 | 100.0% | 25.3% |
| 3934212 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.94 | 90.0 | 9.07e-01 | 98.6% | 99.3% |
| 4024950 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.93 | 90.0 | 8.92e-01 | 98.6% | 98.6% |
| 4577536 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.78 | 74.0 | 6.93e-01 | 100.0% | 98.2% |
| 4139691 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.75 | 71.0 | 6.79e-01 | 99.3% | 100.0% |
| 4146936 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.73 | 68.0 | 6.89e-01 | 97.9% | 100.0% |
| 3244570 | 304.7.1.4 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › S8_pro-domain | 0.52 | 28.0 | 3.44e-01 | 100.0% | 83.5% |
| 3357649 | 213.1.1.5 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS | 0.51 | 35.0 | 3.39e-01 | 78.9% | 60.0% |
| 3246097 | 2484.1.1.130 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1258 | 0.51 | 41.0 | 3.13e-01 | 89.4% | 88.8% |
| 5003841 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 31.0 | 3.40e-01 | 93.0% | 75.5% |
| 4460819 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.50 | 27.0 | 3.15e-01 | 92.3% | 72.0% |