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CAKLQF020000002.1__CAH1073309.1__SAMEA5780031_00448__00085
Bact-VirCAKLQF020000002.1__CAH1073309.1__SAMEA5780031_00448__00085
Identity
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-235
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03886.19 best | ABC_trans_aux | 83.8 | 1.40e-23 | 89.0% | 88.2% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2iqiB00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.83 | 67.0 | 6.96e-01 | 94.5% | 88.9% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.74 | 52.0 | 6.01e-01 | 94.5% | 95.6% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.74 | 50.0 | 5.98e-01 | 94.5% | 100.0% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.69 | 49.0 | 5.61e-01 | 100.0% | 97.1% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.67 | 49.0 | 5.37e-01 | 95.1% | 90.7% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.62 | 46.0 | 5.05e-01 | 85.2% | 94.6% |
| 3ly7A01 | 3.40.50.11830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 40.0 | 4.24e-01 | 92.3% | 74.5% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.60 | 56.0 | 5.38e-01 | 98.9% | 92.6% |
| 2c1iA01 | 3.30.565.50 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.58 | 29.0 | 3.62e-01 | 80.8% | 76.6% |
| 2hhiA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.55 | 30.0 | 3.57e-01 | 81.3% | 78.8% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 25.0 | 3.63e-01 | 71.4% | 100.0% |
| 1ixmB02 | 3.30.565.30 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Sporulation initiation phosphotransferase B (SpoOB), C-terminal domain | 0.54 | 29.0 | 3.55e-01 | 94.5% | 82.1% |
| 4l8oA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 4.11e-01 | 86.3% | 83.5% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 37.0 | 4.29e-01 | 91.8% | 100.0% |
| 2w3sB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.52 | 33.0 | 3.24e-01 | 94.5% | 55.6% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 37.0 | 4.17e-01 | 87.9% | 97.1% |
| 3ef8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 4.33e-01 | 81.9% | 98.0% |
| 3cu3A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.79e-01 | 91.2% | 80.2% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 35.0 | 4.01e-01 | 92.3% | 97.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3062762 | 7503.1.1.2 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › ABC_trans_aux | 0.90 | 69.0 | 7.50e-01 | 91.2% | 92.9% |
| 4045578 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.87 | 60.0 | 6.77e-01 | 92.9% | 88.3% |
| 3971326 | 7503.1.1.2 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › ABC_trans_aux | 0.86 | 72.0 | 7.37e-01 | 94.0% | 89.1% |
| 3386178 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.84 | 69.0 | 7.20e-01 | 94.0% | 91.7% |
| 3965274 | 7503.1.1.2 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › ABC_trans_aux | 0.83 | 60.0 | 6.63e-01 | 87.9% | 89.3% |
| 10331 | 7503.1.1.2 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › ABC_trans_aux | 0.82 | 67.0 | 6.91e-01 | 94.5% | 88.4% |
| 4424316 | 7503.1.1.2 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › ABC_trans_aux | 0.82 | 66.0 | 6.92e-01 | 91.8% | 90.9% |
| 3971691 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.82 | 68.0 | 7.00e-01 | 94.5% | 89.7% |
| 3838697 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.77 | 68.0 | 6.82e-01 | 94.5% | 90.8% |
| 2581841 | 7503.1.1.7 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LpoB | 0.74 | 52.0 | 5.86e-01 | 93.4% | 92.1% |
| 2581837 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.71 | 53.0 | 5.65e-01 | 94.0% | 88.0% |
| 5008315 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.70 | 40.0 | 5.19e-01 | 92.9% | 100.0% |
| 5040123 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.69 | 40.0 | 5.07e-01 | 90.7% | 100.0% |
| 4427435 | 7503.1.1.22 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF29199 | 0.65 | 50.0 | 5.55e-01 | 91.8% | 100.0% |
| 4136826 | 7520.1.1.0 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like | 0.64 | 44.0 | 5.05e-01 | 92.9% | 92.8% |
| 3428134 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.57 | 32.0 | 4.08e-01 | 94.0% | 98.0% |
| 3377619 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.54 | 35.0 | 3.51e-01 | 87.4% | 60.2% |
| 2980101 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.54 | 43.0 | 3.91e-01 | 82.4% | 84.2% |
| 3372143 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.54 | 35.0 | 4.09e-01 | 100.0% | 93.6% |
| 3021721 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.53 | 44.0 | 3.97e-01 | 86.3% | 81.1% |
| 3607231 | 7504.1.1.3 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Maf | 0.53 | 48.0 | 4.25e-01 | 94.5% | 96.4% |
| 3596928 | 7520.1.1.0 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like | 0.52 | 45.0 | 4.45e-01 | 92.9% | 98.5% |
| 5072383 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.52 | 37.0 | 4.13e-01 | 86.8% | 92.4% |
| 5017300 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.50 | 33.0 | 3.99e-01 | 81.3% | 100.0% |