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CAKLQF020000002.1__CAH1073319.1__SAMEA5780031_00451__00088

Bact-Vir

CAKLQF020000002.1__CAH1073319.1__SAMEA5780031_00451__00088

Identity

Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 43-200
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04403.19 best PqiA 130.2 9.00e-38 98.7% 98.1%
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p79A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.73 67.0 6.37e-01 97.5% 95.6%
3x29A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.69 63.0 6.21e-01 97.5% 98.2%
6dlzA01 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.68 63.0 6.04e-01 100.0% 98.9%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.68 46.0 5.31e-01 94.9% 96.5%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.66 61.0 6.01e-01 100.0% 95.3%
3l39A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.66 53.0 4.88e-01 99.4% 66.5%
5j1hA01 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 44.0 4.19e-01 84.8% 58.8%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.65 41.0 4.50e-01 81.0% 77.3%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 42.0 5.01e-01 81.0% 100.0%
2qvaA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.63 40.0 4.34e-01 78.5% 76.7%
5nl6A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 42.0 4.89e-01 84.2% 100.0%
4o6yB00 1.20.120.1770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.62 54.0 4.90e-01 94.9% 100.0%
1sj7C00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.61 40.0 3.94e-01 73.4% 60.8%
6h2dS01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.60 52.0 4.68e-01 94.3% 96.0%
2p61A00 1.20.120.490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain 0.60 34.0 3.94e-01 70.9% 76.3%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.60 46.0 4.57e-01 85.4% 77.1%
3mekA04 1.25.40.970 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 28.0 3.72e-01 79.1% 85.0%
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.59 44.0 4.36e-01 77.8% 82.1%
2p7vA00 1.20.120.1370 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 0.59 41.0 4.21e-01 91.8% 74.2%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.58 35.0 4.02e-01 83.5% 79.5%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.58 43.0 4.13e-01 77.2% 91.5%
5ux2B01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 41.0 3.71e-01 98.7% 53.3%
8hk0B03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 45.0 4.80e-01 98.7% 97.1%
4y9jA01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 47.0 4.83e-01 92.4% 94.0%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 41.0 4.57e-01 82.9% 97.5%
1dn1B00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 42.0 3.80e-01 80.4% 55.0%
1fftC00 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.56 49.0 4.70e-01 100.0% 81.6%
1hywA00 3.30.1580.10 Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W 0.55 21.0 3.53e-01 95.6% 98.3%
2hsbA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.54 34.0 3.76e-01 72.2% 77.8%
4hyjA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 47.0 4.17e-01 99.4% 82.2%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.52 36.0 4.18e-01 74.1% 100.0%
2azjA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.52 40.0 3.41e-01 82.3% 84.1%
1st6A02 1.20.120.810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle 0.52 40.0 3.54e-01 81.6% 83.9%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964436 633.23.1.11 alpha bundles › Bromodomain-like › Claudin › Claudin › PqiA 0.94 91.0 9.10e-01 100.0% 98.8%
3946883 633.23.1.11 alpha bundles › Bromodomain-like › Claudin › Claudin › PqiA 0.93 88.0 8.95e-01 99.4% 99.4%
3975735 601.1.2.89 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PqiA 0.93 86.0 8.84e-01 96.8% 100.0%
3942873 633.23.1.11 alpha bundles › Bromodomain-like › Claudin › Claudin › PqiA 0.93 87.0 8.78e-01 98.1% 98.1%
3975734 601.1.2.89 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PqiA 0.89 82.0 8.37e-01 98.7% 98.7%
3164792 633.23.1.11 alpha bundles › Bromodomain-like › Claudin › Claudin › PqiA 0.88 82.0 8.22e-01 99.4% 96.9%
3964444 601.1.2.89 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PqiA 0.86 80.0 8.04e-01 100.0% 96.9%
3942871 633.23.1.11 alpha bundles › Bromodomain-like › Claudin › Claudin › PqiA 0.84 77.0 7.80e-01 97.5% 98.1%
3597092 604.5.1.55 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PqiA 0.81 75.0 6.76e-01 99.4% 73.8%
4930774 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.76 64.0 6.75e-01 96.8% 100.0%
3559578 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.74 67.0 6.12e-01 97.5% 90.7%
3886774 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.74 68.0 6.38e-01 99.4% 97.9%
3228189 633.23.1.14 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.74 66.0 6.45e-01 94.9% 98.8%
3211341 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.73 63.0 6.31e-01 96.8% 89.4%
3733774 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.73 68.0 6.07e-01 99.4% 98.1%
3708221 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.73 67.0 6.53e-01 97.5% 100.0%
4135417 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.73 67.0 6.08e-01 97.5% 93.2%
4996806 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.73 62.0 6.34e-01 94.9% 92.3%
3920610 633.23.1.2 alpha bundles › Bromodomain-like › Claudin › Claudin › GSG-1 0.73 67.0 6.37e-01 99.4% 97.3%
3896178 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.72 68.0 6.71e-01 100.0% 97.0%
3668980 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.72 55.0 5.93e-01 96.8% 92.6%
3538582 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.72 65.0 6.26e-01 97.5% 90.0%
3509199 633.23.1.4 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.72 65.0 6.02e-01 96.8% 99.5%
3870847 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.71 66.0 5.95e-01 99.4% 90.0%
3821755 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.71 56.0 5.60e-01 100.0% 81.2%
3242789 633.23.1.14 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.71 66.0 6.59e-01 99.4% 98.1%
3571347 633.23.1.4 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.71 64.0 5.92e-01 96.8% 99.0%
3601384 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.70 63.0 6.25e-01 94.9% 94.5%
3593620 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.70 64.0 6.17e-01 98.7% 96.1%
3600254 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.70 62.0 5.87e-01 94.9% 100.0%
3560634 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.69 65.0 6.18e-01 100.0% 94.4%
3218956 633.23.1.14 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.69 63.0 6.01e-01 99.4% 88.6%
3847690 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.69 64.0 6.37e-01 99.4% 97.5%
4022191 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.69 62.0 5.48e-01 97.5% 98.7%
3217045 633.23.1.14 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.69 63.0 6.31e-01 99.4% 98.1%
4013297 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.69 64.0 6.08e-01 100.0% 96.8%
3643228 633.21.1.18 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom 0.69 61.0 6.13e-01 99.4% 95.6%
3593313 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.69 61.0 5.71e-01 94.9% 94.7%
3895327 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.68 63.0 6.29e-01 99.4% 97.5%
3907213 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.68 43.0 5.28e-01 85.4% 100.0%
3502265 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.68 62.0 5.92e-01 99.4% 96.8%
5041952 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.68 44.0 4.71e-01 75.9% 75.6%
5031279 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.68 61.0 6.17e-01 96.8% 98.1%
4075008 633.21.1.18 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom 0.68 61.0 6.10e-01 99.4% 97.0%
3914072 633.23.1.19 alpha bundles › Bromodomain-like › Claudin › Claudin › TMEM37 0.67 62.0 5.94e-01 99.4% 96.7%
3909614 633.23.1.4 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.66 60.0 5.74e-01 100.0% 98.4%
3742353 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.66 60.0 5.29e-01 100.0% 95.6%
3213624 633.23.1.14 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.65 59.0 5.79e-01 97.5% 97.6%
3504307 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.64 41.0 4.43e-01 77.2% 74.8%
3479515 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.64 43.0 4.74e-01 75.9% 85.6%
4587229 5000.4.1.0 alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain 0.64 44.0 4.02e-01 71.5% 52.9%
3170243 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 49.0 3.45e-01 84.2% 93.5%
4153446 604.12.1.4 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 0.62 42.0 4.85e-01 81.6% 98.2%
3586228 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 39.0 4.73e-01 81.0% 100.0%
3884664 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 45.0 4.66e-01 78.5% 80.7%
3501944 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.61 56.0 5.25e-01 99.4% 92.3%
3391989 7015.1.1.2 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › XK-related 0.61 54.0 4.21e-01 97.5% 56.3%
3935027 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 38.0 4.62e-01 82.9% 100.0%
3702176 603.1.1.100 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27017 0.59 45.0 4.74e-01 85.4% 88.6%
3600368 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.59 46.0 4.89e-01 83.5% 94.8%
4980754 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.59 53.0 5.30e-01 99.4% 97.6%
3358814 3684.1.1.2 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.58 51.0 4.39e-01 96.8% 75.3%
3276862 3758.1.1.0 alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins 0.58 52.0 4.76e-01 100.0% 87.9%
3940779 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 37.0 4.29e-01 78.5% 100.0%
3766742 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.55 37.0 4.22e-01 72.8% 93.0%
3548818 5001.1.1.111 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw 0.55 46.0 3.79e-01 93.0% 76.1%
4526844 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 42.0 4.11e-01 81.6% 73.7%
3277149 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 33.0 2.88e-01 92.4% 38.4%
5083350 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.53 33.0 3.74e-01 71.5% 80.7%
5050687 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 47.0 4.76e-01 98.1% 98.1%
3227706 5001.1.1.59 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sri 0.53 45.0 3.66e-01 92.4% 63.5%
4335537 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 3.91e-01 92.4% 89.6%
3165479 1075.4.1.2 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 0.50 46.0 3.53e-01 100.0% 54.6%