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CAKLQF020000002.1__CAH1073430.1__SAMEA5780031_00495__00130
Bact-VirCAKLQF020000002.1__CAH1073430.1__SAMEA5780031_00495__00130
Identity
- Kingdom:
- phage
Quality
90.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 73-164
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08479.17 best | POTRA_2 | 61.1 | 1.00e-16 | 84.8% | 97.4% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6wilA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.90 | 72.0 | 7.53e-01 | 83.7% | 98.8% |
| 6wimA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.85 | 66.0 | 7.26e-01 | 84.8% | 100.0% |
| 2mhjA00 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.82 | 70.0 | 6.92e-01 | 92.4% | 87.4% |
| 3njtA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.81 | 60.0 | 6.63e-01 | 81.5% | 97.3% |
| 2x8xX02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.80 | 62.0 | 6.70e-01 | 84.8% | 97.4% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.76 | 53.0 | 5.96e-01 | 80.4% | 97.1% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.76 | 61.0 | 6.35e-01 | 84.8% | 95.2% |
| 5efrA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.75 | 59.0 | 6.26e-01 | 83.7% | 100.0% |
| 3og5A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.74 | 60.0 | 6.22e-01 | 88.0% | 94.1% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.73 | 57.0 | 6.08e-01 | 83.7% | 100.0% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.72 | 56.0 | 6.07e-01 | 84.8% | 100.0% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.71 | 56.0 | 5.93e-01 | 84.8% | 95.1% |
| 4k3bA05 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.69 | 53.0 | 5.68e-01 | 88.0% | 96.2% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.66 | 51.0 | 5.35e-01 | 83.7% | 98.8% |
| 4p47A00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.57 | 40.0 | 2.84e-01 | 75.0% | 52.5% |
| 1aoaA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.55 | 43.0 | 3.94e-01 | 82.6% | 73.7% |
| 2crwA00 | 1.10.220.150 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Arf GTPase activating protein | 0.52 | 39.0 | 3.38e-01 | 80.4% | 94.6% |
| 6c6bB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 3.04e-01 | 78.3% | 68.8% |
| 3jyoA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 37.0 | 3.27e-01 | 76.1% | 89.2% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 33.0 | 3.31e-01 | 76.1% | 64.8% |
| 3mvcB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 40.0 | 3.48e-01 | 87.0% | 87.7% |
| 4hw8A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 36.0 | 2.95e-01 | 75.0% | 85.2% |
| 1pjaA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 38.0 | 2.85e-01 | 83.7% | 96.3% |
| 4g68A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 37.0 | 2.98e-01 | 79.3% | 71.8% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941830 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.92 | 73.0 | 7.87e-01 | 85.9% | 95.0% |
| 3965239 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.92 | 74.0 | 7.95e-01 | 83.7% | 96.2% |
| 2725337 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.90 | 77.0 | 7.82e-01 | 89.1% | 97.8% |
| 4312076 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.89 | 69.0 | 7.62e-01 | 84.8% | 98.7% |
| 3968822 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.87 | 70.0 | 7.50e-01 | 88.0% | 96.2% |
| 3969393 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.87 | 70.0 | 7.46e-01 | 88.0% | 96.2% |
| 3967562 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.86 | 69.0 | 6.87e-01 | 89.1% | 82.1% |
| 3970284 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.85 | 69.0 | 7.20e-01 | 89.1% | 91.8% |
| 4354750 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.85 | 66.0 | 7.26e-01 | 85.9% | 100.0% |
| 4317803 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.84 | 79.0 | 7.68e-01 | 98.9% | 98.0% |
| 1481663 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.84 | 67.0 | 7.19e-01 | 89.1% | 97.5% |
| 3164093 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.83 | 70.0 | 7.09e-01 | 90.2% | 90.0% |
| 4887533 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.79 | 64.0 | 6.11e-01 | 84.8% | 76.0% |
| 4258146 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.79 | 62.0 | 6.64e-01 | 84.8% | 96.2% |
| 1138119 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.77 | 62.0 | 6.57e-01 | 85.9% | 97.6% |
| 3432936 | 3121.1.1.9 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA2_Toc75 | 0.77 | 52.0 | 6.11e-01 | 70.7% | 98.5% |
| 389297 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.77 | 60.0 | 6.33e-01 | 84.8% | 93.8% |
| 4578194 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.76 | 60.0 | 6.19e-01 | 90.2% | 89.4% |
| 4107395 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.75 | 57.0 | 6.20e-01 | 83.7% | 98.7% |
| 3839149 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.75 | 60.0 | 6.27e-01 | 87.0% | 92.9% |
| 4237901 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.75 | 60.0 | 6.13e-01 | 85.9% | 95.6% |
| 4541918 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.74 | 59.0 | 6.23e-01 | 85.9% | 96.2% |
| 4872716 | 3121.1.1.4 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 | 0.74 | 58.0 | 6.00e-01 | 83.7% | 88.5% |
| 2547933 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.73 | 59.0 | 6.10e-01 | 87.0% | 95.3% |
| 4551762 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.72 | 58.0 | 5.91e-01 | 85.9% | 95.6% |
| 1261966 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.72 | 57.0 | 5.87e-01 | 87.0% | 89.8% |
| 4085807 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.72 | 57.0 | 5.88e-01 | 84.8% | 95.3% |
| 4528693 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.71 | 55.0 | 5.83e-01 | 84.8% | 96.2% |
| 1145979 | 3121.1.1.4 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 | 0.70 | 55.0 | 5.82e-01 | 83.7% | 96.3% |
| 4115098 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.70 | 56.0 | 5.76e-01 | 85.9% | 94.1% |
| 3575511 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.69 | 55.0 | 5.47e-01 | 89.1% | 83.2% |
| 3965463 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.69 | 54.0 | 5.49e-01 | 84.8% | 95.6% |
| 3965223 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.69 | 53.0 | 5.74e-01 | 82.6% | 100.0% |
| 3166208 | 3121.1.1.4 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 | 0.68 | 52.0 | 5.56e-01 | 82.6% | 95.0% |
| 3616286 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.65 | 44.0 | 3.17e-01 | 70.7% | 41.8% |
| 4492160 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.62 | 49.0 | 5.10e-01 | 84.8% | 95.3% |
| 3604355 | 7523.1.1.23 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 | 0.59 | 42.0 | 3.58e-01 | 75.0% | 91.6% |
| 3560747 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.59 | 41.0 | 2.88e-01 | 75.0% | 49.0% |
| 3851865 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.56 | 38.0 | 2.79e-01 | 71.7% | 47.4% |
| 2576232 | 315.3.1.1 ↗ | a+b two layers › Tautomerase/MIF-like › Vesiculogenesis and immune response regulator C-terminal domain › Vesiculogenesis and immune response regulator C-terminal domain › LytR_C | 0.52 | 42.0 | 3.66e-01 | 90.2% | 63.5% |
D2
medium
residues 167-239
Domain cluster:
rep: CAKLQF020000006.1__CAH1080360.1__SAMEA5780031_01572__00213__D271-346
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17287.8 best | POTRA_3 | 62.9 | 2.10e-17 | 75.3% | 100.0% |
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.84 | 78.0 | 7.47e-01 | 100.0% | 100.0% |
| 3q6bA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.84 | 78.0 | 7.77e-01 | 100.0% | 98.6% |
| 4k3bA05 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.83 | 77.0 | 7.51e-01 | 100.0% | 92.4% |
| 2x8xX03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.82 | 76.0 | 7.28e-01 | 100.0% | 96.4% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.82 | 73.0 | 7.20e-01 | 100.0% | 92.1% |
| 5efrA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.79 | 72.0 | 6.94e-01 | 98.6% | 100.0% |
| 4k3bA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.79 | 73.0 | 6.92e-01 | 100.0% | 94.0% |
| 4qkyA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.78 | 72.0 | 7.26e-01 | 100.0% | 98.6% |
| 5efrA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.78 | 69.0 | 6.96e-01 | 95.9% | 100.0% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.78 | 71.0 | 6.94e-01 | 98.6% | 100.0% |
| 4bzaA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.77 | 70.0 | 6.85e-01 | 100.0% | 92.4% |
| 4k3bA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.77 | 70.0 | 6.48e-01 | 100.0% | 94.6% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.76 | 70.0 | 6.67e-01 | 100.0% | 95.2% |
| 5uayA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.71 | 63.0 | 6.05e-01 | 98.6% | 86.6% |
| 3cueB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.68 | 52.0 | 3.98e-01 | 82.2% | 59.3% |
| 2qdfA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.65 | 55.0 | 5.49e-01 | 100.0% | 96.1% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.62 | 49.0 | 4.47e-01 | 86.3% | 75.8% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.62 | 47.0 | 3.55e-01 | 82.2% | 49.5% |
| 2afsA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.62 | 44.0 | 2.90e-01 | 75.3% | 18.3% |
| 3g8qA02 | 3.30.70.1940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 44.0 | 4.32e-01 | 91.8% | 68.8% |
| 5b3pA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.59 | 44.0 | 3.66e-01 | 80.8% | 58.2% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.59 | 38.0 | 3.92e-01 | 86.3% | 69.0% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 43.0 | 3.57e-01 | 84.9% | 93.1% |
| 1pfoA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.57 | 36.0 | 4.12e-01 | 97.3% | 90.6% |
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 4.50e-01 | 94.5% | 87.9% |
| 1b7yB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 42.0 | 3.26e-01 | 84.9% | 95.8% |
| 3o66B01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 46.0 | 3.55e-01 | 93.2% | 61.3% |
| 2f8mA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 40.0 | 3.99e-01 | 90.4% | 73.4% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 44.0 | 3.53e-01 | 98.6% | 43.3% |
| 1us5A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 43.0 | 3.58e-01 | 91.8% | 97.8% |
| 1sw2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 44.0 | 3.44e-01 | 93.2% | 60.8% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.46e-01 | 95.9% | 92.2% |
| 2dyuA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.53 | 43.0 | 3.01e-01 | 97.3% | 81.3% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 39.0 | 2.76e-01 | 84.9% | 41.5% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 3.17e-01 | 98.6% | 83.6% |
| 1rh5A00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.51 | 42.0 | 2.68e-01 | 93.2% | 44.6% |
| 5tfmA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 38.0 | 3.47e-01 | 82.2% | 81.2% |
| 1ciiA02 | 3.30.305.10 | Alpha Beta › 2-Layer Sandwich › Colicin Ia; domain 2 › Colicin Ia; domain 2 | 0.50 | 38.0 | 3.51e-01 | 84.9% | 94.1% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 34.0 | 3.14e-01 | 71.2% | 93.1% |
| 2o5fB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.50 | 42.0 | 3.38e-01 | 100.0% | 55.6% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4413560 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.97 | 90.0 | 8.90e-01 | 100.0% | 93.3% |
| 3941837 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.94 | 83.0 | 8.47e-01 | 97.3% | 95.7% |
| 4395753 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.90 | 78.0 | 8.01e-01 | 100.0% | 95.7% |
| 3965223 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.87 | 79.0 | 7.90e-01 | 97.3% | 100.0% |
| 3967750 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.86 | 77.0 | 7.86e-01 | 100.0% | 98.6% |
| 4407101 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.85 | 78.0 | 7.80e-01 | 100.0% | 96.0% |
| 3425922 | 3121.1.1.8 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA1_3_Toc75 | 0.85 | 79.0 | 7.27e-01 | 100.0% | 92.2% |
| 3432937 | 3121.1.1.8 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA1_3_Toc75 | 0.85 | 78.0 | 7.42e-01 | 100.0% | 97.6% |
| 4673176 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.85 | 78.0 | 7.77e-01 | 100.0% | 96.0% |
| 2725338 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.84 | 78.0 | 7.82e-01 | 100.0% | 98.6% |
| 4042262 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.84 | 78.0 | 7.55e-01 | 100.0% | 91.3% |
| 3969378 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.83 | 75.0 | 7.67e-01 | 97.3% | 100.0% |
| 3824883 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.83 | 76.0 | 7.22e-01 | 98.6% | 94.1% |
| 1124104 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.83 | 77.0 | 7.68e-01 | 100.0% | 97.3% |
| 119488 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.83 | 76.0 | 6.93e-01 | 100.0% | 91.6% |
| 3970278 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.82 | 76.0 | 7.56e-01 | 100.0% | 97.3% |
| 3316662 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.82 | 76.0 | 7.18e-01 | 100.0% | 90.6% |
| 4465658 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.81 | 73.0 | 7.43e-01 | 98.6% | 100.0% |
| 3660838 | 3121.1.1.12 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › GIL1_IRKI_C | 0.81 | 75.0 | 4.66e-01 | 100.0% | 21.8% |
| 3165909 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.81 | 75.0 | 7.51e-01 | 100.0% | 97.3% |
| 4541918 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.81 | 75.0 | 7.26e-01 | 100.0% | 95.0% |
| 3165534 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.81 | 73.0 | 7.22e-01 | 100.0% | 94.7% |
| 3839154 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.80 | 74.0 | 7.02e-01 | 100.0% | 91.8% |
| 3839149 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.80 | 74.0 | 7.03e-01 | 100.0% | 90.6% |
| 3422928 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.80 | 74.0 | 6.00e-01 | 100.0% | 60.0% |
| 3484890 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.80 | 73.0 | 6.67e-01 | 100.0% | 82.1% |
| 3963877 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.80 | 73.0 | 7.30e-01 | 100.0% | 97.3% |
| 1731820 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.79 | 73.0 | 7.08e-01 | 100.0% | 95.0% |
| 3967560 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.79 | 71.0 | 7.09e-01 | 100.0% | 96.0% |
| 3787852 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.79 | 72.0 | 6.06e-01 | 100.0% | 70.0% |
| 3388238 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.79 | 69.0 | 7.04e-01 | 98.6% | 100.0% |
| 4542622 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.78 | 71.0 | 6.61e-01 | 100.0% | 96.7% |
| 3702588 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.78 | 70.0 | 6.53e-01 | 100.0% | 85.6% |
| 1713442 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.77 | 70.0 | 6.61e-01 | 100.0% | 83.9% |
| 4492160 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.77 | 70.0 | 6.64e-01 | 100.0% | 95.3% |
| 3965463 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.74 | 67.0 | 6.27e-01 | 100.0% | 95.6% |
| 3387628 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.74 | 66.0 | 6.08e-01 | 100.0% | 93.7% |
| 3839142 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.72 | 64.0 | 6.01e-01 | 98.6% | 98.9% |
| 3811780 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.71 | 45.0 | 3.87e-01 | 86.3% | 40.9% |
| 4163838 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.71 | 62.0 | 6.22e-01 | 100.0% | 98.7% |
| 5070744 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.65 | 56.0 | 4.86e-01 | 100.0% | 83.3% |
| 4952886 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.65 | 55.0 | 4.80e-01 | 97.3% | 88.7% |
| 4309637 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.64 | 55.0 | 5.30e-01 | 97.3% | 100.0% |
| 3518306 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.64 | 45.0 | 3.00e-01 | 76.7% | 55.2% |
| 3166208 | 3121.1.1.4 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 | 0.63 | 53.0 | 5.24e-01 | 98.6% | 100.0% |
| 4938780 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.63 | 54.0 | 5.03e-01 | 100.0% | 97.9% |
| 5030373 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.62 | 54.0 | 4.96e-01 | 98.6% | 96.8% |
| 4990211 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.60 | 51.0 | 4.70e-01 | 98.6% | 100.0% |
| 4937870 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.58 | 48.0 | 4.51e-01 | 98.6% | 100.0% |
| 3402556 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.58 | 40.0 | 2.71e-01 | 75.3% | 40.3% |
| 5025078 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.57 | 48.0 | 4.33e-01 | 97.3% | 95.2% |
| 5080834 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.57 | 48.0 | 4.40e-01 | 100.0% | 96.2% |
| 4997766 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.56 | 48.0 | 4.32e-01 | 98.6% | 99.0% |
| 5079022 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.56 | 47.0 | 4.18e-01 | 97.3% | 90.9% |
| 4957408 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.55 | 47.0 | 4.23e-01 | 98.6% | 98.1% |
| 3796780 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.55 | 43.0 | 3.07e-01 | 89.0% | 64.5% |
| 5040415 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.55 | 47.0 | 4.24e-01 | 100.0% | 98.1% |
| 3470394 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.54 | 44.0 | 2.98e-01 | 94.5% | 61.2% |
| 3959699 | 810.1.1.0 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) | 0.54 | 46.0 | 3.76e-01 | 100.0% | 76.0% |
| 3713388 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.53e-01 | 91.8% | 87.9% |
| 4480390 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.53 | 41.0 | 3.11e-01 | 87.7% | 91.3% |
| 3797519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 2.40e-01 | 82.2% | 15.0% |
| 5072501 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.53 | 43.0 | 3.98e-01 | 97.3% | 98.0% |
| 4433789 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.52 | 42.0 | 2.88e-01 | 89.0% | 86.3% |
| 2754332 | 2008.1.1.24 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDCD9 | 0.52 | 41.0 | 2.67e-01 | 89.0% | 74.3% |
| 3255511 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.51 | 37.0 | 2.76e-01 | 87.7% | 29.5% |
| 3598536 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 37.0 | 2.17e-01 | 76.7% | 13.9% |
| 3505289 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.51 | 41.0 | 3.11e-01 | 94.5% | 86.8% |
| 4027217 | 7558.1.1.1 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase | 0.51 | 45.0 | 3.23e-01 | 100.0% | 69.1% |
D3
medium
residues 440-585
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03865.20 best | ShlB | 106.0 | 3.90e-30 | 74.0% | 33.6% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.95 | 88.0 | 6.35e-01 | 100.0% | 39.6% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.94 | 72.0 | 5.40e-01 | 100.0% | 37.5% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.91 | 85.0 | 6.05e-01 | 99.3% | 38.3% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.83 | 64.0 | 5.20e-01 | 100.0% | 46.0% |
| 4c00A04 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.78 | 72.0 | 5.44e-01 | 97.9% | 44.9% |
| 7btxA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.77 | 71.0 | 5.28e-01 | 97.9% | 47.9% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.72 | 57.0 | 4.78e-01 | 100.0% | 50.4% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.69 | 48.0 | 5.11e-01 | 97.9% | 80.2% |
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.66 | 49.0 | 4.81e-01 | 91.8% | 71.6% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.65 | 48.0 | 4.86e-01 | 91.1% | 76.2% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.64 | 48.0 | 4.82e-01 | 90.4% | 76.4% |
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.64 | 59.0 | 4.89e-01 | 100.0% | 59.2% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 57.0 | 4.10e-01 | 100.0% | 37.2% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 51.0 | 4.84e-01 | 95.2% | 72.7% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 45.0 | 4.72e-01 | 97.9% | 80.7% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 57.0 | 3.82e-01 | 100.0% | 27.3% |
| 1by5A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 56.0 | 3.75e-01 | 100.0% | 26.0% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.61 | 57.0 | 4.39e-01 | 100.0% | 49.0% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 49.0 | 4.94e-01 | 97.9% | 83.3% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 57.0 | 3.96e-01 | 100.0% | 35.3% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.60 | 48.0 | 4.75e-01 | 91.1% | 78.7% |
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 55.0 | 3.97e-01 | 100.0% | 34.8% |
| 3fhhA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 55.0 | 3.79e-01 | 100.0% | 38.8% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 56.0 | 3.86e-01 | 100.0% | 39.3% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 55.0 | 3.72e-01 | 100.0% | 39.0% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 54.0 | 3.63e-01 | 98.6% | 27.1% |
| 2oq8A00 | 2.60.40.2930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 35.0 | 3.52e-01 | 78.1% | 57.3% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 54.0 | 3.53e-01 | 100.0% | 41.9% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 53.0 | 3.60e-01 | 100.0% | 32.1% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.57 | 53.0 | 3.91e-01 | 100.0% | 50.0% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.55 | 34.0 | 3.51e-01 | 93.2% | 62.9% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.55 | 45.0 | 4.29e-01 | 90.4% | 72.4% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.54 | 49.0 | 4.48e-01 | 97.9% | 95.8% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.54 | 48.0 | 4.34e-01 | 97.9% | 86.8% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 4.36e-01 | 84.2% | 97.8% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.51 | 41.0 | 3.91e-01 | 91.8% | 74.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4393174 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.99 | 92.0 | 6.44e-01 | 98.6% | 36.6% |
| 3964588 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.98 | 94.0 | 6.97e-01 | 100.0% | 45.5% |
| 4135567 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.97 | 94.0 | 6.54e-01 | 100.0% | 37.3% |
| 3941832 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.96 | 89.0 | 6.24e-01 | 99.3% | 36.6% |
| 4679157 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.92 | 86.0 | 6.07e-01 | 100.0% | 37.3% |
| 4618904 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.88 | 82.0 | 5.79e-01 | 98.6% | 36.8% |
| 4546669 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.88 | 85.0 | 5.89e-01 | 99.3% | 36.3% |
| 3387592 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.88 | 83.0 | 6.03e-01 | 100.0% | 40.7% |
| 3379458 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.86 | 77.0 | 5.70e-01 | 99.3% | 41.2% |
| 4604561 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.85 | 82.0 | 5.86e-01 | 100.0% | 38.9% |
| 4008277 | 5084.5.1.62 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27458 | 0.84 | 60.0 | 4.51e-01 | 99.3% | 33.4% |
| 3964155 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.79 | 62.0 | 4.98e-01 | 100.0% | 45.2% |
| 1312446 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.78 | 72.0 | 5.44e-01 | 97.9% | 44.9% |
| 4027955 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.76 | 70.0 | 5.12e-01 | 96.6% | 46.7% |
| 3980865 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.76 | 64.0 | 5.13e-01 | 99.3% | 47.8% |
| 3396582 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.76 | 70.0 | 5.16e-01 | 96.6% | 44.7% |
| 3257282 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.76 | 70.0 | 5.34e-01 | 99.3% | 50.0% |
| 3944979 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.71 | 58.0 | 5.02e-01 | 98.6% | 56.8% |
| 2103480 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.71 | 63.0 | 4.89e-01 | 100.0% | 46.4% |
| 4937593 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.71 | 43.0 | 3.76e-01 | 95.9% | 40.4% |
| 3964265 | 5084.1.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter | 0.70 | 64.0 | 6.51e-01 | 98.6% | 97.9% |
| 4926981 | 9.13.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like | 0.69 | 51.0 | 5.50e-01 | 97.9% | 88.0% |
| 4156350 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.69 | 59.0 | 4.30e-01 | 100.0% | 34.9% |
| 4009884 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.68 | 62.0 | 4.75e-01 | 100.0% | 46.2% |
| 3502994 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.67 | 37.0 | 3.93e-01 | 74.0% | 60.8% |
| 3969607 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.67 | 62.0 | 4.75e-01 | 100.0% | 52.4% |
| 3976326 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.67 | 56.0 | 5.17e-01 | 100.0% | 71.1% |
| 3839997 | 5084.5.4.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X | 0.66 | 61.0 | 4.36e-01 | 100.0% | 44.6% |
| 4419134 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.63 | 60.0 | 4.65e-01 | 100.0% | 55.9% |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.62 | 56.0 | 4.14e-01 | 100.0% | 38.5% |
| 4371754 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.62 | 57.0 | 3.76e-01 | 100.0% | 35.3% |
| 3838130 | 5084.5.1.25 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 | 0.62 | 57.0 | 3.97e-01 | 100.0% | 32.7% |
| 3978947 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.61 | 56.0 | 4.13e-01 | 100.0% | 53.3% |
| 3371614 | 5084.1.1.27 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2921_N | 0.60 | 48.0 | 4.78e-01 | 100.0% | 79.9% |
| 1760521 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.60 | 55.0 | 3.79e-01 | 100.0% | 38.9% |
| 3840054 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.59 | 49.0 | 5.02e-01 | 97.3% | 91.4% |
| 3945603 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.59 | 49.0 | 3.40e-01 | 98.6% | 28.2% |
| 3839690 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.58 | 54.0 | 4.82e-01 | 97.9% | 80.0% |
| 3839821 | 5084.5.1.51 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TonB_dep_Rec_b-barrel | 0.58 | 53.0 | 3.64e-01 | 100.0% | 34.8% |
| 3837948 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.57 | 53.0 | 4.79e-01 | 97.9% | 75.8% |
| 3717466 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.57 | 49.0 | 4.45e-01 | 90.4% | 74.7% |
| 5061892 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.56 | 50.0 | 4.26e-01 | 100.0% | 66.9% |
| 4285338 | 5087.1.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 | 0.54 | 50.0 | 4.56e-01 | 99.3% | 90.0% |
| 3797033 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 38.0 | 3.72e-01 | 74.7% | 67.1% |
| 3238811 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.54 | 28.0 | 2.20e-01 | 89.0% | 22.5% |