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CAKLQF020000002.1__CAH1073470.1__SAMEA5780031_00519__00150
Bact-VirCAKLQF020000002.1__CAH1073470.1__SAMEA5780031_00519__00150
Identity
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-125
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.66 | 49.0 | 5.39e-01 | 100.0% | 96.2% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 4.29e-01 | 99.0% | 86.6% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 40.0 | 4.08e-01 | 99.0% | 78.1% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.55 | 39.0 | 3.93e-01 | 100.0% | 72.4% |
| 1cqmA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.54 | 36.0 | 3.70e-01 | 91.0% | 69.4% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.53 | 49.0 | 4.31e-01 | 98.0% | 98.6% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.53 | 34.0 | 3.52e-01 | 99.0% | 67.7% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 39.0 | 3.80e-01 | 92.0% | 71.3% |
| 4pwyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 3.20e-01 | 98.0% | 35.6% |
| 2p8eA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 37.0 | 2.73e-01 | 75.0% | 85.6% |
| 3nwzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 40.0 | 3.52e-01 | 85.0% | 66.9% |
| 4zkfA01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.51 | 43.0 | 3.03e-01 | 95.0% | 52.0% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.51 | 44.0 | 4.27e-01 | 94.0% | 98.2% |
| 3cc8A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 45.0 | 3.56e-01 | 100.0% | 61.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027886 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.73 | 46.0 | 5.34e-01 | 91.0% | 87.7% |
| 4996918 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.67 | 49.0 | 5.45e-01 | 100.0% | 95.0% |
| 3690420 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.62 | 51.0 | 5.40e-01 | 100.0% | 97.8% |
| 5029814 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.59 | 38.0 | 4.51e-01 | 93.0% | 98.5% |
| 5013821 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.54 | 50.0 | 4.68e-01 | 99.0% | 91.7% |
| 3848474 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.54 | 50.0 | 4.23e-01 | 99.0% | 88.0% |
| 4514876 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.54 | 33.0 | 3.77e-01 | 92.0% | 87.1% |
| 3404978 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.53 | 45.0 | 3.15e-01 | 95.0% | 51.6% |
| 4028174 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.53 | 46.0 | 4.20e-01 | 96.0% | 90.4% |
| 4956935 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.52 | 43.0 | 4.18e-01 | 100.0% | 82.7% |
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 45.0 | 4.16e-01 | 95.0% | 99.2% |
| 167188 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.50 | 45.0 | 3.56e-01 | 100.0% | 61.1% |