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CAKLQF020000002.1__CAH1073501.1__SAMEA5780031_00535__00165

Bact-Vir

CAKLQF020000002.1__CAH1073501.1__SAMEA5780031_00535__00165

Identity

Kingdom:
phage

Quality

95.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 195-281
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qmiA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.92 87.0 8.58e-01 100.0% 94.5%
4o89A02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.87 81.0 7.88e-01 100.0% 94.7%
3pqvA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.86 78.0 7.56e-01 97.7% 95.8%
1vm6A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.77 56.0 5.72e-01 78.2% 78.3%
1p9lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.75 56.0 5.20e-01 78.2% 84.1%
1dihA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.74 55.0 5.09e-01 78.2% 82.4%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.73 57.0 5.95e-01 82.8% 100.0%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.73 58.0 5.46e-01 83.9% 90.2%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.71 58.0 5.89e-01 97.7% 89.5%
2fa8B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.71 61.0 6.14e-01 100.0% 94.3%
4nwyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.70 63.0 5.51e-01 98.9% 75.0%
3vfiA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 58.0 5.45e-01 96.6% 84.6%
5aykA05 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 58.0 5.50e-01 97.7% 86.3%
5nj5A01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.66 56.0 4.11e-01 94.3% 79.7%
2dj0A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 57.0 5.04e-01 97.7% 84.9%
6g62A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 57.0 5.20e-01 98.9% 78.3%
1f21A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.64 40.0 3.37e-01 100.0% 36.2%
4v1ag00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 56.0 4.72e-01 100.0% 58.1%
5j7dC00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 55.0 5.24e-01 98.9% 84.9%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.64 43.0 4.57e-01 96.6% 80.0%
2diyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 57.0 5.25e-01 100.0% 80.2%
2dc1A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.64 48.0 4.63e-01 81.6% 86.1%
3apoA06 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 54.0 5.05e-01 97.7% 83.2%
2kt9A01 3.30.390.140 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.63 39.0 3.76e-01 97.7% 53.5%
4cw9B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 56.0 5.31e-01 98.9% 83.7%
2rqlA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.63 54.0 5.27e-01 96.6% 92.6%
2hyxA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 56.0 4.29e-01 100.0% 59.7%
2ehgA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.63 45.0 3.78e-01 100.0% 44.3%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.63 54.0 3.83e-01 95.4% 63.0%
1zynA00 3.40.30.80 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.62 53.0 4.13e-01 100.0% 42.9%
3iv4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 53.0 4.94e-01 97.7% 79.5%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 38.0 4.18e-01 100.0% 80.9%
4i6xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 53.0 4.86e-01 100.0% 80.3%
2l57A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 52.0 4.69e-01 98.9% 71.4%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.60 50.0 4.97e-01 95.4% 95.6%
7aooB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 53.0 4.37e-01 100.0% 70.4%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.60 51.0 4.84e-01 96.6% 82.2%
1bedA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 52.0 4.18e-01 100.0% 91.2%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 37.0 4.20e-01 100.0% 91.4%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 42.0 4.50e-01 74.7% 100.0%
1jfuA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 51.0 4.13e-01 100.0% 68.2%
3c8eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 4.30e-01 92.0% 69.3%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.58 30.0 3.54e-01 79.3% 73.7%
1grxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 49.0 5.00e-01 95.4% 98.8%
1tu5A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 44.0 4.10e-01 81.6% 88.0%
1b78A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.57 48.0 3.82e-01 95.4% 99.5%
4bs9A05 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 46.0 4.25e-01 92.0% 72.8%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 43.0 3.64e-01 87.4% 68.7%
8fkmA01 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 39.0 3.33e-01 86.2% 99.4%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 31.0 2.88e-01 97.7% 44.8%
1xdpA03 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.50 43.0 3.42e-01 96.6% 60.6%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4110960 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.93 89.0 8.59e-01 100.0% 92.6%
5041554 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.92 88.0 8.49e-01 100.0% 93.7%
11366 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.92 87.0 8.37e-01 100.0% 90.5%
3971302 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.92 88.0 8.48e-01 100.0% 92.6%
5056876 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.91 86.0 8.20e-01 100.0% 91.0%
5043849 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.91 86.0 8.15e-01 100.0% 96.0%
4264956 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.90 85.0 8.23e-01 100.0% 93.7%
5048799 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.90 84.0 7.97e-01 100.0% 94.0%
4936978 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.89 84.0 7.96e-01 100.0% 93.0%
4995255 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.89 84.0 7.97e-01 100.0% 90.0%
5082943 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.89 84.0 7.79e-01 100.0% 86.7%
4045612 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.89 84.0 7.95e-01 100.0% 91.0%
5060057 2485.2.1.0 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.89 84.0 7.78e-01 100.0% 91.4%
4376550 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.88 83.0 8.08e-01 100.0% 95.8%
5033745 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.88 79.0 7.73e-01 95.4% 90.4%
4927197 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.88 82.0 7.80e-01 100.0% 92.0%
3881647 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.87 82.0 7.47e-01 100.0% 90.0%
4888978 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.87 82.0 7.57e-01 100.0% 89.6%
5058142 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.87 82.0 7.76e-01 100.0% 91.0%
3597281 2485.2.1.0 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.86 81.0 7.56e-01 100.0% 93.3%
3715712 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.86 80.0 7.50e-01 100.0% 93.3%
3602153 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.85 80.0 7.74e-01 100.0% 90.5%
4026241 2485.2.1.0 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.85 79.0 7.27e-01 100.0% 94.5%
4949084 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.84 79.0 5.17e-01 100.0% 26.8%
4964054 2485.1.1.34 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx 0.76 61.0 6.53e-01 94.3% 100.0%
3292897 298.1.1.9 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.75 55.0 5.15e-01 77.0% 81.9%
4268188 298.1.1.9 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.75 57.0 5.15e-01 80.5% 74.8%
3768766 2485.1.1.34 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx 0.72 64.0 6.36e-01 97.7% 100.0%
312628 2485.1.1.34 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx 0.72 62.0 6.25e-01 98.9% 95.3%
150040 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.71 58.0 5.89e-01 97.7% 89.5%
3802643 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 42.0 4.11e-01 100.0% 54.7%
3670595 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 42.0 4.11e-01 100.0% 54.7%
5011716 2485.1.1.34 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx 0.69 55.0 5.84e-01 94.3% 100.0%
4040973 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.69 50.0 5.48e-01 75.9% 97.1%
3789856 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.68 44.0 3.99e-01 100.0% 49.6%
4014289 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.67 60.0 4.92e-01 100.0% 66.9%
3708638 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.66 59.0 5.44e-01 100.0% 85.8%
5004699 298.3.1.2 a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter 0.66 55.0 4.75e-01 89.7% 71.1%
4978348 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.66 50.0 5.07e-01 80.5% 96.5%
2644098 2485.1.1.19 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › L51_S25_CI-B8 0.66 57.0 5.76e-01 100.0% 98.8%
3492857 2485.1.1.19 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › L51_S25_CI-B8 0.66 58.0 5.01e-01 100.0% 71.4%
3282815 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.65 57.0 5.45e-01 96.6% 89.0%
3995512 7504.1.1.0 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like 0.65 58.0 4.39e-01 100.0% 100.0%
3954396 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.64 54.0 4.92e-01 95.4% 73.3%
4192201 563.1.1.1 alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.64 46.0 3.65e-01 79.3% 37.7%
3604391 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.63 51.0 4.89e-01 87.4% 91.0%
5029238 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.63 53.0 5.15e-01 95.4% 96.0%
3972879 330.2.1.1 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.63 53.0 5.12e-01 95.4% 88.0%
5037621 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.63 54.0 5.26e-01 96.6% 96.8%
5024241 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.62 52.0 5.15e-01 94.3% 100.0%
5013768 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.62 51.0 5.00e-01 92.0% 100.0%
4417423 563.1.1.1 alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.62 44.0 3.64e-01 77.0% 41.9%
5008315 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.62 53.0 5.11e-01 97.7% 98.0%
2987309 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.62 40.0 4.25e-01 100.0% 77.0%
5040123 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.61 51.0 4.96e-01 94.3% 96.0%
3968288 7520.1.1.1 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.61 53.0 4.36e-01 100.0% 84.1%
4995515 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.61 52.0 3.98e-01 95.4% 81.9%
4168740 563.1.1.1 alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.61 42.0 3.36e-01 78.2% 35.0%
4944561 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.61 47.0 4.58e-01 86.2% 88.0%
3497120 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 42.0 4.11e-01 72.4% 75.8%
3435911 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 41.0 3.84e-01 71.3% 57.3%
5069695 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.60 51.0 4.81e-01 97.7% 84.4%
4025734 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.59 52.0 3.91e-01 100.0% 93.8%
3825504 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.59 43.0 4.27e-01 77.0% 91.1%
5044215 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 50.0 3.96e-01 97.7% 83.5%
5044578 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.59 45.0 3.45e-01 83.9% 39.1%
3596526 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 47.0 4.38e-01 100.0% 68.2%
4927872 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.58 49.0 4.50e-01 97.7% 72.5%
4960250 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.57 48.0 4.69e-01 97.7% 100.0%
5018204 7520.1.1.0 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.57 50.0 4.13e-01 100.0% 86.7%
3329783 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 40.0 3.99e-01 75.9% 73.7%
3965319 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 44.0 4.05e-01 83.9% 89.6%
4954798 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 43.0 3.93e-01 83.9% 84.6%
4026006 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 41.0 4.22e-01 75.9% 90.0%
4510000 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 39.0 3.67e-01 72.4% 66.4%
3660311 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 40.0 4.15e-01 74.7% 88.7%
4976982 330.6.1.0 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.56 39.0 3.70e-01 74.7% 67.3%
5011595 330.10.1.1 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.54 42.0 3.71e-01 92.0% 56.2%
4649416 330.6.1.0 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.54 37.0 3.79e-01 71.3% 77.6%
4984691 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 40.0 3.68e-01 81.6% 90.0%
4507935 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 40.0 3.62e-01 82.8% 65.0%
5024203 330.10.1.0 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.53 39.0 3.88e-01 79.3% 77.8%
5023892 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 44.0 3.87e-01 96.6% 91.5%
5066760 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 42.0 3.74e-01 90.8% 83.9%
D2 high residues 286-347
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01137.27 best RTC 39.1 6.70e-10 79.0% 22.2%
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qmhA01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.95 86.0 5.52e-01 96.8% 24.7%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.76 52.0 4.59e-01 71.0% 60.0%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.76 66.0 6.04e-01 100.0% 80.7%
2h00B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 59.0 4.18e-01 100.0% 36.7%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 58.0 4.17e-01 100.0% 77.7%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.68 57.0 5.63e-01 96.8% 89.7%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.67 56.0 5.40e-01 98.4% 91.8%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.66 46.0 3.50e-01 72.6% 33.6%
4ymhD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 56.0 3.89e-01 100.0% 79.1%
2pcrA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.66 57.0 4.72e-01 100.0% 75.7%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.66 56.0 5.31e-01 96.8% 81.3%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.66 52.0 5.08e-01 91.9% 87.3%
2abyA00 3.30.70.1980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF09406, DUF2004 0.65 48.0 3.93e-01 80.6% 45.9%
5eufA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.65 44.0 3.05e-01 71.0% 29.7%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.65 51.0 4.39e-01 91.9% 55.0%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.64 49.0 4.78e-01 87.1% 80.0%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 54.0 3.87e-01 100.0% 80.2%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 42.0 3.89e-01 72.6% 50.6%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 43.0 4.10e-01 71.0% 60.0%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.63 55.0 4.43e-01 100.0% 81.6%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 52.0 4.04e-01 100.0% 96.9%
2b3tA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 51.0 3.77e-01 100.0% 94.3%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 52.0 3.73e-01 100.0% 80.3%
3g6sA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.62 51.0 3.47e-01 98.4% 28.4%
5x7fA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 50.0 3.69e-01 100.0% 83.3%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.61 51.0 4.76e-01 95.2% 78.2%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.61 49.0 4.84e-01 93.5% 89.6%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.61 49.0 4.35e-01 91.9% 67.0%
2lxrA00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.61 50.0 4.82e-01 100.0% 90.8%
1akoA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.61 52.0 3.45e-01 98.4% 23.5%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 41.0 3.84e-01 72.6% 67.1%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.59 48.0 4.68e-01 93.5% 80.3%
4fppA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.58 50.0 3.94e-01 100.0% 82.5%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 46.0 4.37e-01 90.3% 73.1%
6rh8A02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.58 50.0 3.77e-01 100.0% 80.4%
1jg5A00 3.30.1410.10 Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP 0.58 39.0 3.63e-01 71.0% 97.6%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.38e-01 75.8% 64.3%
4gt8A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 50.0 3.95e-01 100.0% 77.4%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.57 47.0 3.61e-01 100.0% 94.6%
3sl2A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 48.0 3.77e-01 98.4% 81.4%
4pl9A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 49.0 3.78e-01 100.0% 76.0%
2hnkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 46.0 3.30e-01 98.4% 33.2%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.56 45.0 3.77e-01 90.3% 51.8%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 49.0 3.79e-01 100.0% 76.8%
6qrjA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 48.0 3.76e-01 100.0% 79.9%
5idmA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 47.0 3.51e-01 98.4% 76.3%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 45.0 3.56e-01 100.0% 89.7%
1nj8A03 3.30.110.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS 0.55 45.0 4.53e-01 100.0% 98.4%
2nxcA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 43.0 3.42e-01 96.8% 37.9%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 44.0 3.72e-01 93.5% 71.2%
3ntvA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 3.06e-01 91.9% 30.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.36e-01 87.1% 42.3%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.55e-01 87.1% 52.7%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.54 46.0 3.14e-01 100.0% 58.6%
3hnrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 3.05e-01 95.2% 28.5%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.18e-01 83.9% 40.8%
3ou2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 40.0 2.92e-01 91.9% 26.0%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.77e-01 87.1% 72.9%
4ldgA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.54 39.0 2.76e-01 80.6% 70.4%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.60e-01 87.1% 59.0%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 42.0 3.69e-01 91.9% 75.7%
3d7aA01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.53 36.0 2.90e-01 72.6% 32.4%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 43.0 3.47e-01 95.2% 69.9%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.58e-01 87.1% 56.9%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 42.0 3.72e-01 96.8% 58.2%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.37e-01 87.1% 49.6%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.28e-01 87.1% 43.4%
2fsrA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 44.0 3.31e-01 98.4% 75.4%
3eo4D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 3.36e-01 100.0% 77.2%
1r62A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 45.0 3.55e-01 100.0% 78.7%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 43.0 3.65e-01 93.5% 83.0%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.35e-01 90.3% 48.4%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 44.0 3.20e-01 98.4% 38.0%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 47.0 4.01e-01 100.0% 66.3%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.67e-01 87.1% 69.0%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.18e-01 87.1% 44.7%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.51 39.0 2.63e-01 87.1% 91.0%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.77e-01 88.7% 81.8%
4dw8A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 41.0 3.58e-01 96.8% 86.8%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 40.0 3.67e-01 90.3% 89.5%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.25e-01 87.1% 52.5%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3983093 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.94 84.0 5.38e-01 95.2% 24.2%
4062594 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.93 87.0 5.53e-01 100.0% 24.2%
4972174 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.92 87.0 5.54e-01 100.0% 24.8%
4927196 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.92 87.0 5.52e-01 100.0% 25.7%
5048798 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.91 85.0 5.46e-01 100.0% 25.0%
3500354 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.89 82.0 5.30e-01 98.4% 25.5%
4947079 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.88 82.0 5.31e-01 100.0% 25.7%
3300974 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.84 75.0 5.34e-01 98.4% 36.6%
5066977 304.43.1.0 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 0.73 50.0 4.71e-01 71.0% 60.0%
4248896 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 53.0 5.28e-01 85.5% 93.8%
3950059 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.69 56.0 5.50e-01 91.9% 91.2%
4981701 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.68 57.0 5.72e-01 100.0% 100.0%
5007423 2.1.1.95 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C 0.68 48.0 3.79e-01 74.2% 79.2%
4228350 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.68 56.0 5.52e-01 93.5% 95.4%
3737998 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 54.0 4.98e-01 91.9% 74.1%
135569 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.67 56.0 5.38e-01 98.4% 90.5%
4989805 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.67 56.0 5.50e-01 98.4% 88.6%
4074459 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.67 57.0 4.09e-01 100.0% 77.4%
None 0.67 56.0 4.02e-01 100.0% 73.2%
4493041 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.67 56.0 3.94e-01 100.0% 68.2%
3250910 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.67 54.0 5.30e-01 93.5% 85.7%
None 0.67 57.0 3.68e-01 100.0% 32.8%
4095798 7587.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P 0.67 57.0 4.66e-01 100.0% 70.2%
3218484 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 54.0 5.22e-01 91.9% 82.9%
4474140 320.2.1.1 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.66 57.0 5.63e-01 96.8% 95.4%
3186329 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 52.0 4.34e-01 91.9% 68.3%
None 0.66 56.0 4.00e-01 100.0% 77.5%
4044555 2003.1.5.151 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.66 56.0 4.00e-01 100.0% 47.8%
3578925 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 53.0 4.54e-01 91.9% 64.8%
None 0.66 55.0 3.91e-01 100.0% 71.4%
3357930 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 54.0 5.13e-01 95.2% 84.0%
3226102 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 53.0 4.49e-01 91.9% 63.9%
4529316 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.65 54.0 3.83e-01 100.0% 76.0%
3838308 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.65 43.0 4.29e-01 71.0% 64.6%
3599538 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 55.0 3.76e-01 100.0% 67.6%
None 0.65 54.0 3.89e-01 100.0% 77.3%
3871908 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.65 52.0 4.36e-01 91.9% 57.5%
4652232 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.65 54.0 3.94e-01 100.0% 80.5%
3481394 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.65 52.0 4.28e-01 91.9% 65.8%
3661869 320.1.1.12 a+b two layers › R3H domain-like › R3H domain › R3H domain › RRM_NFXL1 0.64 52.0 3.78e-01 91.9% 37.3%
3926462 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 49.0 4.26e-01 87.1% 56.2%
4029151 320.2.1.0 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain 0.64 53.0 5.35e-01 91.9% 98.3%
3403645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 51.0 5.20e-01 93.5% 95.0%
3596513 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 49.0 4.44e-01 87.1% 65.6%
3517969 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 51.0 4.53e-01 91.9% 77.9%
3386910 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.64 52.0 5.10e-01 98.4% 92.9%
3740807 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 52.0 4.78e-01 95.2% 72.9%
4361828 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 49.0 4.21e-01 87.1% 55.2%
4337810 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.63 54.0 3.76e-01 100.0% 81.8%
3308590 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 52.0 4.56e-01 95.2% 61.0%
3581967 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 51.0 5.07e-01 91.9% 93.8%
3416416 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 51.0 4.35e-01 91.9% 63.8%
3595328 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 51.0 4.35e-01 91.9% 55.2%
3343069 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 50.0 4.21e-01 91.9% 60.0%
4937497 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 54.0 4.97e-01 96.8% 81.2%
3410614 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 51.0 4.36e-01 91.9% 57.1%
3198781 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 52.0 4.75e-01 96.8% 70.6%
3737985 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 50.0 4.37e-01 91.9% 61.0%
3396645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 50.0 4.39e-01 91.9% 63.0%
4365938 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.62 51.0 4.73e-01 96.8% 72.9%
3080497 320.2.1.1 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.62 51.0 5.01e-01 93.5% 89.6%
3190610 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.62 50.0 4.22e-01 91.9% 70.0%
3710687 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.62 50.0 4.80e-01 91.9% 77.3%
3780948 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.62 50.0 4.37e-01 93.5% 63.0%
4596174 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.62 52.0 3.46e-01 100.0% 60.7%
3711102 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.62 49.0 4.30e-01 91.9% 61.0%
3262749 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 47.0 4.06e-01 87.1% 62.9%
4012898 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 49.0 4.28e-01 91.9% 62.0%
4012905 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 51.0 4.71e-01 98.4% 72.9%
4011288 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 50.0 5.09e-01 91.9% 96.7%
1165035 320.1.1.2 a+b two layers › R3H domain-like › R3H domain › R3H domain › HP1451_C 0.61 49.0 4.82e-01 93.5% 88.2%
3728094 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 49.0 4.28e-01 91.9% 62.0%
3395627 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 47.0 4.52e-01 87.1% 78.7%
3321720 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 49.0 4.14e-01 91.9% 60.0%
3271317 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 48.0 4.32e-01 91.9% 62.1%
5010185 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.61 50.0 4.87e-01 98.4% 91.4%
1434556 320.2.1.1 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.61 50.0 4.93e-01 95.2% 93.9%
3623603 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 48.0 4.18e-01 91.9% 62.9%
5014006 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.61 50.0 4.56e-01 93.5% 71.8%
3879109 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 48.0 4.18e-01 91.9% 56.7%
3386840 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.60 52.0 4.02e-01 100.0% 77.9%
3457072 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.59 47.0 3.76e-01 91.9% 58.6%
1112561 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.59 49.0 3.49e-01 100.0% 76.3%
None 0.59 49.0 3.51e-01 95.2% 30.0%
3170274 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.59 48.0 4.40e-01 98.4% 73.3%
4403429 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.59 51.0 3.87e-01 98.4% 74.8%
None 0.59 49.0 3.50e-01 95.2% 30.0%
3174787 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 43.0 3.92e-01 85.5% 60.0%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.56 42.0 3.98e-01 87.1% 66.3%
3306726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 3.96e-01 83.9% 77.5%
3216083 4012.4.1.1 a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins 0.56 37.0 4.16e-01 77.4% 95.6%
4979624 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.55 43.0 3.65e-01 87.1% 57.3%
None 0.55 43.0 3.14e-01 91.9% 28.5%
None 0.55 43.0 2.94e-01 95.2% 22.5%
None 0.53 41.0 2.97e-01 91.9% 36.7%
4978424 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.50 41.0 3.35e-01 91.9% 59.2%
D3 medium residues 1-90
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01137.27 best RTC 93.9 1.20e-26 81.1% 32.1%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qmhA01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.99 86.0 5.97e-01 88.9% 33.5%
3pqvC01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.86 68.0 4.77e-01 90.0% 29.4%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.74 57.0 4.30e-01 90.0% 35.4%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.72 61.0 6.31e-01 91.1% 97.6%
3zigA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.72 56.0 5.86e-01 90.0% 91.5%
3nutB02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.67 57.0 5.10e-01 96.7% 85.2%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.65 52.0 4.40e-01 84.4% 93.8%
2zvbA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.64 54.0 4.91e-01 96.7% 85.2%
3pt9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 54.0 3.72e-01 92.2% 61.7%
3rcnA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 49.0 3.36e-01 84.4% 50.4%
1c7sA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 48.0 3.09e-01 84.4% 40.9%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.62 41.0 4.59e-01 74.4% 87.1%
5bxrA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 48.0 3.30e-01 84.4% 40.0%
7dvbA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 48.0 3.21e-01 84.4% 45.3%
1vw4H00 3.90.1180.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 0.62 48.0 4.15e-01 84.4% 83.1%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 42.0 3.72e-01 82.2% 46.7%
1wyzA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.62 52.0 4.94e-01 94.4% 94.5%
1tigA00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.62 51.0 5.16e-01 91.1% 100.0%
2m71A00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.61 51.0 5.03e-01 93.3% 90.8%
1jakA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 50.0 3.52e-01 93.3% 65.4%
2crqA01 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.61 48.0 4.93e-01 87.8% 100.0%
2fbaA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.60 44.0 2.81e-01 77.8% 31.9%
2vk2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 49.0 4.39e-01 88.9% 88.5%
7tjhE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 47.0 3.87e-01 88.9% 90.4%
1xjkA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.59 49.0 3.00e-01 93.3% 67.1%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 41.0 3.39e-01 71.1% 39.8%
1wdeA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.59 51.0 4.21e-01 98.9% 87.4%
2dsiA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.58 50.0 4.25e-01 95.6% 95.4%
3i4tA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.58 50.0 4.31e-01 96.7% 84.2%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.58 44.0 3.97e-01 80.0% 92.0%
3ocjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 49.0 3.48e-01 96.7% 65.3%
3lmmA01 3.30.950.30 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain 0.58 50.0 4.23e-01 96.7% 84.1%
4u1qA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 48.0 3.93e-01 96.7% 86.1%
7bvaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 38.0 3.82e-01 85.6% 65.6%
2py6A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 47.0 3.84e-01 92.2% 95.0%
1y7lA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 42.0 4.03e-01 84.4% 67.0%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.57 36.0 3.90e-01 93.3% 77.3%
4qbuA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.56 31.0 3.56e-01 88.9% 74.2%
3vk5B00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.56 45.0 3.35e-01 91.1% 37.7%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 4.04e-01 88.9% 76.4%
1dpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 43.0 3.58e-01 86.7% 98.9%
2f5xA01 3.40.190.150 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bordetella uptake gene, domain 1 0.55 45.0 3.70e-01 91.1% 64.0%
1w66A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 45.0 3.47e-01 90.0% 97.6%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 46.0 3.62e-01 95.6% 76.0%
1h1lD02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 39.0 3.65e-01 93.3% 60.9%
4xxhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 47.0 4.06e-01 94.4% 69.6%
4x9tA01 3.40.190.150 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bordetella uptake gene, domain 1 0.53 43.0 3.61e-01 92.2% 65.9%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.17e-01 72.2% 46.3%
2zvfA02 3.10.310.40 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.53 42.0 4.07e-01 90.0% 92.5%
1q0sA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.82e-01 95.6% 89.0%
1kn6A00 3.30.70.850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain 0.52 32.0 3.49e-01 92.2% 75.3%
3purA02 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.52 45.0 3.21e-01 100.0% 74.2%
2qpqA01 3.40.190.150 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bordetella uptake gene, domain 1 0.51 43.0 3.50e-01 93.3% 62.8%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.50 40.0 3.50e-01 87.8% 94.4%
2oikA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.50 39.0 3.44e-01 85.6% 89.9%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3538483 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.99 85.0 5.80e-01 87.8% 30.4%
4062594 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.99 88.0 6.00e-01 91.1% 31.9%
3500354 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.99 84.0 5.82e-01 86.7% 32.6%
4947079 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.99 85.0 5.91e-01 88.9% 32.7%
4949084 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.98 85.0 5.48e-01 88.9% 24.4%
4927196 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.98 87.0 5.96e-01 91.1% 33.6%
3983093 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.98 88.0 6.11e-01 92.2% 34.6%
5048798 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.98 84.0 5.83e-01 88.9% 32.7%
3639113 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.97 84.0 5.76e-01 88.9% 43.5%
4016509 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.97 83.0 5.53e-01 88.9% 29.0%
4502748 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.95 82.0 5.65e-01 88.9% 36.1%
3693903 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.95 82.0 5.48e-01 88.9% 37.8%
5060056 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.94 83.0 5.76e-01 91.1% 32.8%
4972174 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.94 81.0 5.60e-01 88.9% 32.4%
3597277 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.87 68.0 4.79e-01 88.9% 29.6%
3479207 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.86 68.0 4.63e-01 88.9% 26.1%
4013377 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.86 71.0 5.27e-01 91.1% 38.5%
3704858 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.86 68.0 4.73e-01 88.9% 29.0%
3180998 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.86 67.0 4.52e-01 86.7% 25.2%
3789036 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.86 70.0 4.87e-01 92.2% 29.6%
3405845 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.84 69.0 4.76e-01 91.1% 29.1%
4971553 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.76 59.0 6.27e-01 90.0% 92.5%
4994113 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.76 59.0 6.20e-01 88.9% 91.3%
5027367 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.76 59.0 6.28e-01 90.0% 92.5%
4948041 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.76 59.0 6.25e-01 87.8% 92.5%
5066376 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.76 58.0 6.18e-01 88.9% 91.3%
5074515 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.76 60.0 6.09e-01 90.0% 84.4%
5054522 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.76 59.0 6.24e-01 88.9% 93.7%
5027998 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.75 59.0 5.97e-01 90.0% 83.3%
4494795 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.75 58.0 4.36e-01 90.0% 34.4%
4989122 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.75 58.0 6.14e-01 90.0% 92.5%
5029717 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.73 56.0 5.95e-01 90.0% 92.5%
4295946 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.72 57.0 5.76e-01 91.1% 84.4%
2722837 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.72 59.0 6.08e-01 90.0% 92.9%
4956561 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.69 55.0 5.79e-01 90.0% 96.2%
4928243 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.69 51.0 5.10e-01 83.3% 77.8%
4497067 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.68 57.0 5.79e-01 92.2% 97.8%
5015317 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.68 52.0 5.39e-01 90.0% 87.1%
3198781 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 46.0 4.78e-01 82.2% 77.6%
4675260 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.65 54.0 5.01e-01 91.1% 83.5%
4402757 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.65 55.0 4.83e-01 96.7% 77.0%
3743744 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.64 53.0 5.25e-01 91.1% 93.7%
4930295 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.64 54.0 4.98e-01 95.6% 93.3%
3502555 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.64 53.0 5.22e-01 91.1% 88.4%
4019210 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 44.0 4.84e-01 76.7% 91.4%
3357806 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 43.0 4.90e-01 77.8% 96.9%
4506985 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.63 52.0 5.02e-01 92.2% 93.3%
3731565 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.63 51.0 4.98e-01 90.0% 89.0%
4346533 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.63 52.0 4.90e-01 92.2% 86.2%
4218255 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.63 52.0 5.21e-01 92.2% 98.9%
3974070 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.62 54.0 4.76e-01 97.8% 81.5%
3395407 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.62 52.0 5.30e-01 96.7% 96.5%
4503816 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.62 50.0 4.95e-01 88.9% 90.5%
3557282 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.62 51.0 4.68e-01 92.2% 78.3%
3260420 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.62 50.0 4.45e-01 90.0% 61.9%
3701818 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.62 55.0 4.58e-01 100.0% 66.3%
4024171 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.62 50.0 5.01e-01 91.1% 92.6%
3960260 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.62 51.0 4.82e-01 92.2% 81.8%
4285074 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.62 51.0 4.80e-01 92.2% 81.8%
3573161 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.62 53.0 3.46e-01 95.6% 44.4%
4949867 328.8.1.1 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 0.61 50.0 4.39e-01 88.9% 71.1%
4024901 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.61 51.0 5.27e-01 91.1% 100.0%
4058514 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.61 53.0 4.61e-01 98.9% 75.2%
4113577 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.61 51.0 4.89e-01 93.3% 87.6%
3698585 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 42.0 4.39e-01 74.4% 78.8%
3465277 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.61 51.0 4.86e-01 92.2% 82.9%
4278271 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.61 50.0 5.06e-01 91.1% 97.8%
3595328 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 42.0 4.06e-01 76.7% 61.9%
4194495 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.61 50.0 5.03e-01 92.2% 93.5%
4991024 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.61 52.0 4.48e-01 95.6% 83.9%
4243831 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.61 50.0 4.96e-01 91.1% 95.7%
3543869 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.60 46.0 4.58e-01 84.4% 77.9%
4961356 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.60 52.0 4.62e-01 97.8% 84.4%
5042519 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.60 51.0 4.38e-01 95.6% 80.0%
4927306 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.60 52.0 4.44e-01 96.7% 96.7%
3308590 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.60 44.0 4.31e-01 80.0% 70.0%
4432991 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 42.0 2.81e-01 95.6% 17.8%
3711102 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.60 41.0 3.99e-01 75.6% 64.0%
3901049 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.60 48.0 4.60e-01 91.1% 81.8%
4932985 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.59 51.0 4.39e-01 98.9% 94.0%
3838198 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.58 48.0 4.78e-01 93.3% 95.8%
3190610 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 42.0 3.97e-01 75.6% 76.4%
4985920 7545.1.1.2 a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrH 0.58 44.0 4.19e-01 82.2% 80.0%
3457072 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 42.0 3.65e-01 76.7% 65.0%
3992039 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 41.0 4.10e-01 74.4% 75.5%
3321720 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 42.0 3.96e-01 76.7% 67.3%
4590927 304.28.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.58 39.0 3.93e-01 93.3% 68.9%
5004445 328.8.1.1 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 0.58 46.0 4.08e-01 88.9% 69.6%
4411830 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.57 40.0 3.93e-01 96.7% 67.4%
4318785 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.56 33.0 3.60e-01 87.8% 70.3%
5083153 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.55 42.0 3.77e-01 83.3% 100.0%
4117423 3585.1.1.1 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C 0.55 33.0 3.58e-01 92.2% 72.0%
4322962 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.54 37.0 4.08e-01 74.4% 92.9%
4409246 225.1.1.4 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HWE_HK 0.53 41.0 3.12e-01 82.2% 58.0%
4970012 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 34.0 3.30e-01 70.0% 62.0%
D4 medium residues 91-183
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01137.27 best RTC 94.2 9.70e-27 100.0% 40.3%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qmhA01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.95 92.0 6.48e-01 100.0% 38.9%
3pqvC01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.90 85.0 5.96e-01 100.0% 37.6%
2fpoC00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 49.0 3.97e-01 97.8% 40.3%
1je3A01 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.65 49.0 5.38e-01 93.5% 100.0%
4ponA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 52.0 4.24e-01 98.9% 47.7%
5yd0D01 3.30.950.30 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain 0.64 58.0 4.87e-01 100.0% 72.1%
1i9gA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 49.0 4.01e-01 100.0% 42.9%
1qyrA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 56.0 4.51e-01 98.9% 56.5%
4atnA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 54.0 4.38e-01 98.9% 48.9%
2nraC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.67e-01 83.9% 97.1%
3dh0B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 51.0 4.11e-01 95.7% 46.3%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 4.03e-01 96.8% 45.8%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 4.08e-01 98.9% 44.9%
3a7eA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 48.0 3.76e-01 96.8% 38.7%
1g38A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 3.96e-01 96.8% 51.6%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 37.0 3.82e-01 96.8% 65.2%
3tebB00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.59 50.0 3.67e-01 94.6% 37.1%
2imqX00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.59 48.0 3.51e-01 98.9% 30.7%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.59 41.0 3.35e-01 87.1% 36.7%
3mtiB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 51.0 4.12e-01 96.8% 52.2%
3gkuA01 3.30.30.80 Alpha Beta › 2-Layer Sandwich › Defensin A-like › probable RNA-binding protein from clostridium symbiosum atcc 14940 0.58 34.0 4.07e-01 96.8% 98.1%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 49.0 3.81e-01 95.7% 41.1%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 49.0 3.98e-01 100.0% 51.5%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.57 44.0 4.30e-01 88.2% 73.6%
3a7rA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 48.0 3.57e-01 93.5% 83.5%
4u1qA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 49.0 3.94e-01 96.8% 48.7%
2p8jA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 49.0 3.88e-01 100.0% 56.8%
4noiA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.56 43.0 4.18e-01 88.2% 74.8%
4dkjA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 47.0 3.38e-01 95.7% 39.5%
4xrpC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 46.0 3.85e-01 95.7% 89.1%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.55 48.0 3.95e-01 97.8% 97.1%
3hnrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 3.83e-01 100.0% 56.0%
3u6yA00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.55 45.0 4.42e-01 92.5% 94.9%
2yqzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.65e-01 94.6% 47.2%
2crqA01 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.54 44.0 4.58e-01 95.7% 98.8%
3s1sA02 3.40.50.12420 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 47.0 3.11e-01 100.0% 29.5%
1j5wB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 47.0 3.70e-01 100.0% 71.1%
1tigA00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.53 44.0 4.52e-01 100.0% 100.0%
3jwhA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 45.0 3.69e-01 100.0% 53.4%
2m71A00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.53 46.0 4.53e-01 97.8% 91.8%
4z9eA00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.53 43.0 4.45e-01 91.4% 100.0%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.52 44.0 4.51e-01 96.8% 100.0%
4of0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.84e-01 88.2% 75.8%
1q0sA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 40.0 3.54e-01 94.6% 54.8%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.51 44.0 3.36e-01 98.9% 75.6%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.92e-01 89.2% 75.2%
2vqeC02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.50 44.0 4.30e-01 98.9% 99.0%
4jb9H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 41.0 3.66e-01 88.2% 71.8%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3500354 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.98 95.0 6.67e-01 100.0% 38.9%
3983093 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.98 95.0 6.65e-01 100.0% 38.7%
4062594 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.97 94.0 6.49e-01 100.0% 38.5%
4972174 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.97 94.0 6.53e-01 100.0% 37.2%
4947079 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.97 94.0 6.56e-01 100.0% 38.0%
4949084 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.97 91.0 5.95e-01 100.0% 27.7%
3538483 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.96 92.0 6.37e-01 100.0% 35.8%
4502748 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.95 91.0 6.36e-01 100.0% 37.3%
4927196 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.94 90.0 6.31e-01 100.0% 37.2%
5060056 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.94 89.0 6.23e-01 100.0% 36.8%
3639113 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.94 90.0 6.26e-01 100.0% 43.9%
5048798 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.93 89.0 6.26e-01 100.0% 38.7%
4016509 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.93 89.0 6.00e-01 100.0% 37.2%
3704858 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.92 88.0 6.14e-01 100.0% 36.9%
3597277 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.92 87.0 6.13e-01 100.0% 37.6%
3479207 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.91 86.0 5.86e-01 100.0% 34.6%
3355276 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.91 85.0 7.19e-01 100.0% 68.3%
3789036 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.90 85.0 5.94e-01 100.0% 37.3%
3693903 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.90 86.0 5.87e-01 100.0% 46.8%
3405845 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.90 85.0 5.90e-01 100.0% 36.6%
3300974 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.90 84.0 6.66e-01 100.0% 56.0%
4026240 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.88 83.0 5.78e-01 100.0% 40.9%
4949572 328.8.1.1 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 0.62 52.0 4.78e-01 100.0% 69.6%
3987344 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.62 53.0 4.85e-01 96.8% 75.2%
3479702 304.44.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.61 40.0 3.93e-01 71.0% 60.0%
2995007 2003.1.5.59 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › rRNA_methylase 0.61 54.0 4.30e-01 100.0% 53.9%
5035578 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.61 37.0 2.89e-01 96.8% 26.7%
None 0.59 51.0 4.09e-01 96.8% 52.2%
4022229 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.58 51.0 4.86e-01 98.9% 90.0%
3265590 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 51.0 3.89e-01 100.0% 42.2%
5065117 2003.1.5.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.58 49.0 3.57e-01 96.8% 32.7%
5004445 328.8.1.1 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 0.57 50.0 4.51e-01 100.0% 69.6%
3468209 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.57 48.0 4.55e-01 98.9% 76.5%
3520570 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.57 47.0 4.55e-01 94.6% 81.8%
3731565 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.56 48.0 4.72e-01 95.7% 91.0%
4929238 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.56 33.0 3.58e-01 94.6% 70.7%
4651397 2003.1.5.35 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM 0.56 49.0 3.58e-01 97.8% 65.1%
3600809 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.56 47.0 3.98e-01 95.7% 57.6%
3743744 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.56 47.0 4.72e-01 100.0% 93.7%
None 0.56 47.0 3.89e-01 98.9% 88.3%
3877290 101.1.2.699 alpha arrays › HTH › HTH › winged helix domain › KCTD_C 0.55 42.0 3.95e-01 81.7% 91.3%
4336441 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.55 47.0 4.73e-01 100.0% 94.7%
3456243 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.55 48.0 3.59e-01 100.0% 51.2%
4469154 2003.1.5.89 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Anamorsin_N 0.55 47.0 4.17e-01 100.0% 63.4%
3663236 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.55 47.0 3.61e-01 98.9% 45.5%
4346533 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.55 48.0 4.59e-01 98.9% 85.3%
3437951 207.1.1.79 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.55 46.0 2.98e-01 95.7% 19.2%
3205906 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.54 47.0 4.68e-01 100.0% 97.9%
3557282 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.54 47.0 4.40e-01 100.0% 78.3%
3960260 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.54 47.0 4.50e-01 98.9% 84.5%
4391313 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.54 47.0 4.63e-01 98.9% 93.0%
5026790 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.54 46.0 4.54e-01 98.9% 94.0%
3647882 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 45.0 3.59e-01 97.8% 75.2%
4113577 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.53 47.0 4.53e-01 100.0% 88.6%
3196489 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.53 44.0 4.27e-01 95.7% 80.9%
4314924 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.53 46.0 4.41e-01 98.9% 85.5%
4243831 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.53 45.0 4.53e-01 97.8% 96.8%
4985834 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.53 42.0 3.31e-01 90.3% 74.1%
3276105 912.1.1.0 few secondary structure elements › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain 0.52 45.0 4.52e-01 96.8% 97.9%
3611654 246.3.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.52 44.0 3.32e-01 95.7% 51.0%
3290078 321.4.1.0 a+b two layers › Glutamine synthetase-like › Methyltransferase type 12 N-terminal domain › Methyltransferase type 12 N-terminal domain 0.52 43.0 2.84e-01 95.7% 22.9%
4513312 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.52 43.0 3.87e-01 100.0% 62.8%
3838198 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.52 45.0 4.50e-01 98.9% 96.8%
4278271 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.52 44.0 4.50e-01 97.8% 100.0%
4509589 314.1.1.5 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2e 0.52 45.0 3.23e-01 100.0% 51.7%
4952714 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.52 43.0 3.48e-01 93.5% 76.3%
4562028 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.51 45.0 3.93e-01 100.0% 73.8%
5018660 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.50 42.0 3.39e-01 95.7% 78.0%