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CAKLQF020000002.1__CAH1073531.1__SAMEA5780031_00550__00180

Bact-Vir

CAKLQF020000002.1__CAH1073531.1__SAMEA5780031_00550__00180

Identity

Kingdom:
phage

Quality

85.5 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-143
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3li9A02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 52.0 5.22e-01 71.3% 100.0%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 56.0 5.71e-01 78.7% 97.7%
3c8cB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 55.0 5.67e-01 81.6% 94.5%
5ereA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.70 55.0 5.70e-01 83.1% 100.0%
3li9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 51.0 5.36e-01 77.2% 100.0%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 30.0 4.00e-01 77.2% 76.1%
3cwfA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 52.0 5.75e-01 79.4% 100.0%
1p0zA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 53.0 5.41e-01 81.6% 97.7%
4k08A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 52.0 5.12e-01 80.9% 100.0%
2va0A00 3.30.450.160 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.67 47.0 5.38e-01 75.7% 100.0%
3qp1A00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.63 48.0 4.34e-01 78.7% 86.0%
7jsnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 44.0 3.83e-01 74.3% 85.0%
5l10B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.58 42.0 3.96e-01 76.5% 82.4%
2xepB02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 40.0 3.24e-01 72.1% 92.6%
5bmnA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.53 29.0 3.54e-01 76.5% 84.3%
2nx8A00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 36.0 3.36e-01 70.6% 91.1%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4512007 223.1.1.58 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › 2CSK_N 0.83 78.0 7.23e-01 98.5% 87.9%
3968427 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 77.0 7.46e-01 98.5% 98.7%
4633844 223.1.1.72 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAPES2 0.81 76.0 6.23e-01 100.0% 65.5%
3971124 223.1.1.58 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › 2CSK_N 0.78 60.0 6.51e-01 79.4% 99.1%
4047545 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 70.0 6.67e-01 97.1% 97.4%
3590871 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 72.0 5.69e-01 100.0% 100.0%
3956757 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.76 52.0 6.13e-01 75.0% 100.0%
3977154 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.76 59.0 6.14e-01 80.1% 96.0%
None — 0.76 69.0 5.58e-01 97.8% 63.7%
4295277 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.74 65.0 6.32e-01 98.5% 84.7%
3164706 223.1.1.58 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › 2CSK_N 0.74 56.0 5.88e-01 77.9% 94.4%
5013363 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.74 58.0 5.90e-01 81.6% 100.0%
4928264 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.74 59.0 4.86e-01 83.8% 99.6%
5045301 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.74 58.0 5.64e-01 83.1% 92.7%
4477966 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.73 57.0 5.72e-01 81.6% 100.0%
5002480 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.73 68.0 6.21e-01 100.0% 88.6%
3972479 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.73 51.0 5.64e-01 82.4% 89.1%
4928212 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.73 59.0 5.20e-01 86.0% 66.7%
4156259 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 66.0 5.07e-01 100.0% 70.3%
4962757 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 58.0 5.82e-01 86.8% 100.0%
4632674 223.1.1.171 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_3-Cache_2 0.71 50.0 5.43e-01 77.9% 85.2%
4317800 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 57.0 5.68e-01 83.8% 86.4%
3379279 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 57.0 5.68e-01 84.6% 97.9%
4399650 223.1.1.59 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › ArlS_N 0.70 65.0 5.95e-01 100.0% 78.9%
4184401 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.70 65.0 6.14e-01 100.0% 86.9%
4459946 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.69 60.0 4.91e-01 95.6% 67.1%
3948977 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.69 52.0 5.68e-01 80.9% 97.3%
4949049 3488.1.1.5 ↗ a+b three layers › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain › Cache_3-Cache_2 0.68 52.0 5.54e-01 79.4% 100.0%
3837952 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.68 51.0 5.64e-01 77.9% 100.0%
3953386 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.68 55.0 5.17e-01 87.5% 85.9%
4421841 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.68 62.0 4.87e-01 100.0% 56.4%
4098695 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.67 61.0 5.02e-01 100.0% 63.7%
4199524 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.67 61.0 5.08e-01 100.0% 66.8%
350146 223.1.1.39 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › AbfS_sensor 0.65 49.0 5.20e-01 79.4% 92.2%
3914648 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.63 56.0 4.59e-01 93.4% 92.3%
4004598 223.8.1.3 ↗ a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain › GAPES4 0.62 52.0 5.05e-01 100.0% 80.0%
5045650 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.59 47.0 4.95e-01 84.6% 93.3%
5014246 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.58 37.0 4.32e-01 72.1% 91.6%
5018825 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 43.0 4.67e-01 86.0% 98.2%
3820521 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.51 36.0 2.84e-01 70.6% 83.3%
4040016 814.1.1.2 ↗ a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase 0.50 38.0 3.76e-01 78.7% 100.0%
D2 high residues 202-291
PDB
Domain cluster: rep: CAKLQF020000003.1__CAH1076577.1__SAMEA5780031_00850__00177__D197-278
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00512.32 best HisKA 58.3 8.90e-16 74.4% 97.0%
D3 high residues 297-445
PDB
Domain cluster: rep: Ig7659_scaffold_8_prodigal-single.1__X__X__00240__D301-446
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02518.32 best HATPase_c 81.5 8.60e-23 71.8% 95.5%