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CAKLQF020000002.1__CAH1073702.1__SAMEA5780031_00632__00261

Bact-Vir

CAKLQF020000002.1__CAH1073702.1__SAMEA5780031_00632__00261

Identity

Kingdom:
phage

Quality

71.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 105-200
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03330.25 best DPBB_1 101.3 3.80e-29 94.8% 97.6%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.97 92.0 9.39e-01 97.9% 100.0%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.82 78.0 7.44e-01 100.0% 95.4%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.82 77.0 7.48e-01 99.0% 98.1%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 63.0 6.76e-01 99.0% 100.0%
1yleA02 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 50.0 6.00e-01 96.9% 96.9%
1bw3A00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.76 69.0 6.28e-01 99.0% 96.8%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.75 61.0 6.18e-01 97.9% 86.5%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.75 61.0 5.94e-01 100.0% 78.3%
2g5dA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.75 70.0 5.36e-01 100.0% 52.2%
3czbA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.73 68.0 5.56e-01 100.0% 59.4%
1h0hA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.71 64.0 5.15e-01 96.9% 73.9%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.71 63.0 5.92e-01 95.8% 100.0%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.68 61.0 6.03e-01 100.0% 97.1%
2e7zA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 61.0 5.09e-01 97.9% 83.9%
2vpzA05 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 59.0 4.96e-01 96.9% 80.5%
7eu1A01 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.67 61.0 5.33e-01 100.0% 76.1%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.65 59.0 5.88e-01 97.9% 100.0%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 37.0 3.57e-01 100.0% 50.0%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 46.0 4.73e-01 100.0% 78.0%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 36.0 3.38e-01 100.0% 47.0%
4gklA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 41.0 4.32e-01 100.0% 76.1%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 35.0 3.99e-01 99.0% 79.5%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.58 32.0 3.38e-01 90.6% 57.8%
2vbuA01 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.58 51.0 4.65e-01 100.0% 100.0%
1qfjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 47.0 4.82e-01 97.9% 94.5%
1f94A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.56 27.0 3.25e-01 78.1% 68.3%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 48.0 4.85e-01 99.0% 97.9%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.55 35.0 3.73e-01 100.0% 74.1%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 40.0 3.92e-01 100.0% 70.5%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 47.0 4.78e-01 99.0% 98.9%
2ed8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.75e-01 99.0% 76.7%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 47.0 4.62e-01 100.0% 99.0%
2lgnA00 2.60.40.2850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 32.0 3.76e-01 94.8% 89.4%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 36.0 3.93e-01 91.7% 88.3%
3pl0B00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 41.0 3.09e-01 86.5% 81.7%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 39.0 3.74e-01 100.0% 69.7%
3lzqA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.51 44.0 3.79e-01 95.8% 73.9%
4es8B02 2.60.40.3580 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.96e-01 100.0% 80.2%
2pn0A02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.50 37.0 4.02e-01 100.0% 91.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4370157 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.99 96.0 8.13e-01 100.0% 69.2%
3165363 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.99 96.0 7.69e-01 100.0% 58.2%
4419943 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.98 96.0 9.46e-01 100.0% 96.0%
3974469 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.98 93.0 9.42e-01 97.9% 98.9%
3976753 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.93 89.0 7.40e-01 100.0% 63.3%
4880811 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 62.0 7.01e-01 70.8% 100.0%
4243381 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.88 83.0 8.28e-01 99.0% 99.0%
4396535 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 69.0 7.60e-01 99.0% 98.8%
3187650 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.87 83.0 7.75e-01 100.0% 97.4%
4500954 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 62.0 6.94e-01 99.0% 94.7%
3274054 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 81.0 7.43e-01 100.0% 86.7%
4299713 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 81.0 7.80e-01 100.0% 100.0%
3726745 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.84 79.0 7.66e-01 99.0% 100.0%
3426007 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.84 79.0 7.15e-01 100.0% 88.8%
3720989 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 78.0 7.43e-01 99.0% 94.5%
4115281 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 79.0 7.29e-01 100.0% 100.0%
3264281 1.1.2.33 beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 0.83 78.0 6.94e-01 100.0% 86.2%
3277741 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.82 78.0 7.28e-01 100.0% 85.2%
349867 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.82 78.0 7.33e-01 100.0% 92.0%
3010131 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.82 77.0 7.38e-01 99.0% 94.4%
4586145 1.1.2.3 beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin 0.81 66.0 6.49e-01 83.3% 95.0%
4412522 1.1.2.3 beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin 0.81 77.0 6.52e-01 100.0% 83.8%
4200720 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.81 67.0 7.12e-01 96.9% 97.6%
4205030 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.80 67.0 7.10e-01 96.9% 97.6%
4445483 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.79 66.0 7.01e-01 96.9% 97.6%
5028227 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 67.0 7.13e-01 96.9% 100.0%
5041263 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 65.0 6.97e-01 96.9% 97.6%
4122341 1.1.2.25 beta barrels › cradle loop barrel › RIFT-related › double psi › Glyco_hydro_75 0.79 73.0 5.44e-01 100.0% 79.0%
4981335 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 66.0 6.98e-01 96.9% 98.8%
5076635 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 65.0 6.93e-01 97.9% 98.8%
4941448 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 64.0 6.84e-01 96.9% 97.6%
4526788 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.78 62.0 6.83e-01 95.8% 100.0%
5074983 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 65.0 6.68e-01 100.0% 94.4%
5074694 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 61.0 5.33e-01 94.8% 57.1%
5053173 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 64.0 6.49e-01 100.0% 88.4%
5069203 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 66.0 6.82e-01 99.0% 95.6%
3602941 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 63.0 6.72e-01 97.9% 97.6%
1883479 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.77 66.0 6.80e-01 100.0% 96.7%
5053172 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 64.0 6.76e-01 100.0% 98.8%
5045002 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 62.0 6.46e-01 96.9% 91.1%
5053174 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 63.0 6.58e-01 100.0% 93.3%
3332068 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 70.0 5.81e-01 96.9% 100.0%
5053341 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.76 68.0 6.73e-01 100.0% 92.0%
4946804 1.1.2.44 beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.76 63.0 6.68e-01 97.9% 98.8%
3828556 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 70.0 6.02e-01 96.9% 95.0%
4263053 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 62.0 6.57e-01 96.9% 97.6%
4970084 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 63.0 6.68e-01 95.8% 100.0%
4639326 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.75 62.0 5.95e-01 100.0% 76.4%
3463336 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 70.0 6.90e-01 97.9% 97.0%
4145927 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.75 62.0 5.50e-01 100.0% 62.2%
4669978 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 62.0 5.76e-01 100.0% 70.6%
4122334 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.75 62.0 5.40e-01 100.0% 60.0%
4087090 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.75 62.0 5.46e-01 100.0% 62.2%
4245831 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.75 62.0 5.38e-01 100.0% 60.0%
3605376 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.75 68.0 6.92e-01 99.0% 98.9%
4040376 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.75 62.0 5.52e-01 100.0% 64.6%
3409396 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.75 61.0 5.97e-01 97.9% 80.0%
4011221 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 68.0 5.56e-01 97.9% 57.5%
4030729 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.74 70.0 6.77e-01 100.0% 97.1%
3735360 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 69.0 6.57e-01 100.0% 94.5%
5073963 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 61.0 6.52e-01 96.9% 98.8%
4485138 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.74 61.0 5.56e-01 100.0% 67.2%
3477728 1.1.2.19 beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.74 65.0 6.53e-01 100.0% 94.7%
4027672 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.74 67.0 6.55e-01 100.0% 89.5%
5001338 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.74 64.0 6.49e-01 100.0% 94.7%
3740727 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 61.0 6.39e-01 94.8% 100.0%
3688059 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 68.0 5.58e-01 100.0% 77.6%
3557903 1.1.2.19 beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.73 64.0 6.44e-01 100.0% 94.7%
4021338 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 67.0 6.66e-01 100.0% 98.0%
4013955 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 67.0 6.13e-01 100.0% 96.8%
4890564 101.1.2.869 alpha arrays › HTH › HTH › winged helix domain › IML1_N 0.72 57.0 6.15e-01 97.9% 100.0%
4200338 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 65.0 6.34e-01 97.9% 94.3%
5042283 208.1.1.56 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › MazE_antitoxin 0.72 67.0 4.56e-01 100.0% 31.5%
3186315 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 66.0 6.56e-01 100.0% 97.0%
3391397 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 59.0 6.15e-01 100.0% 95.6%
5020071 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 63.0 5.74e-01 95.8% 87.2%
5008659 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 62.0 5.46e-01 95.8% 93.6%
4990996 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 63.0 5.51e-01 96.9% 92.1%
3180110 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.70 58.0 5.48e-01 86.5% 84.5%
3406944 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 62.0 5.47e-01 100.0% 71.4%
3386113 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 62.0 6.04e-01 96.9% 93.3%
3627366 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.61 55.0 5.50e-01 100.0% 96.0%
4446853 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 35.0 3.80e-01 88.5% 70.0%
5055294 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.59 41.0 4.37e-01 100.0% 81.2%
5081216 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.54 41.0 4.06e-01 100.0% 74.3%
5056905 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.51 43.0 4.46e-01 99.0% 100.0%
2855394 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.51 40.0 3.63e-01 100.0% 63.6%
3783477 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 40.0 3.85e-01 100.0% 75.5%