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CAKLQF020000002.1__CAH1073711.1__SAMEA5780031_00635__00264
Bact-VirCAKLQF020000002.1__CAH1073711.1__SAMEA5780031_00635__00264
Identity
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-104
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05437.18 best | AzlD | 49.4 | 5.90e-13 | 94.7% | 71.7% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vayA02 | 1.20.120.1600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 44.0 | 4.21e-01 | 77.6% | 54.0% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.62 | 42.0 | 4.81e-01 | 80.3% | 96.4% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.61 | 48.0 | 4.81e-01 | 84.2% | 89.7% |
| 3jr7A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.60 | 43.0 | 3.71e-01 | 75.0% | 96.6% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 43.0 | 3.39e-01 | 75.0% | 98.1% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.59 | 45.0 | 4.48e-01 | 84.2% | 85.2% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 45.0 | 2.88e-01 | 84.2% | 25.1% |
| 2okuA00 | 1.20.120.470 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Acyl-CoA dehydrogenase, C-terminal domain | 0.58 | 45.0 | 3.87e-01 | 82.9% | 66.4% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 47.0 | 4.00e-01 | 96.1% | 96.5% |
| 1eljA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 49.0 | 3.72e-01 | 98.7% | 94.7% |
| 3b89A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.55 | 38.0 | 4.30e-01 | 81.6% | 100.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 38.0 | 3.47e-01 | 73.7% | 75.5% |
| 2g7zA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 43.0 | 3.43e-01 | 84.2% | 52.3% |
| 2h9dD00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.54 | 38.0 | 3.54e-01 | 73.7% | 59.0% |
| 2dt8A01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 41.0 | 3.36e-01 | 85.5% | 51.0% |
| 2ehgA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 39.0 | 3.21e-01 | 80.3% | 71.8% |
| 2wzvA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.52 | 37.0 | 2.75e-01 | 86.8% | 26.6% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.52 | 36.0 | 3.65e-01 | 80.3% | 70.9% |
| 2ba0A03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 39.0 | 3.88e-01 | 84.2% | 86.7% |
| 1zq9A02 | 1.10.8.480 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 37.0 | 3.50e-01 | 78.9% | 79.6% |
| 2au5A00 | 1.20.120.590 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › EF2947-like | 0.51 | 39.0 | 3.45e-01 | 88.2% | 55.0% |
| 1h3lB00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 38.0 | 3.86e-01 | 82.9% | 83.3% |
| 2fhxA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 44.0 | 3.12e-01 | 97.4% | 84.5% |
| 7dluA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 41.0 | 3.77e-01 | 96.1% | 89.5% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988673 | 181.1.1.34 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › AzlD | 0.75 | 63.0 | 6.56e-01 | 98.7% | 100.0% |
| 3165347 | 148.1.3.335 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AzlD | 0.75 | 66.0 | 6.68e-01 | 100.0% | 100.0% |
| 4167579 | 5069.1.3.1 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt | 0.64 | 53.0 | 4.69e-01 | 90.8% | 95.5% |
| 4027876 | 1198.1.1.0 ↗ | alpha bundles › BTA121 › BTA121 › BTA121 | 0.64 | 53.0 | 4.36e-01 | 93.4% | 51.7% |
| 3963735 | 5069.1.3.1 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt | 0.63 | 56.0 | 4.93e-01 | 100.0% | 92.9% |
| 3492889 | 11.2.1.19 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 | 0.62 | 47.0 | 3.11e-01 | 80.3% | 86.1% |
| 3718788 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.61 | 43.0 | 3.67e-01 | 75.0% | 48.8% |
| 3413026 | 103.4.1.3 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Med15_N | 0.57 | 42.0 | 4.34e-01 | 84.2% | 85.7% |
| 3297133 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.56 | 44.0 | 4.44e-01 | 84.2% | 90.7% |
| 4486707 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.56 | 43.0 | 4.20e-01 | 82.9% | 84.7% |
| 5029464 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.55 | 42.0 | 4.21e-01 | 82.9% | 78.8% |
| 3744484 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.55 | 43.0 | 4.28e-01 | 84.2% | 81.2% |
| 3508925 | 107.1.1.18 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › PF29414 | 0.55 | 40.0 | 3.04e-01 | 76.3% | 67.6% |
| 3230949 | 103.4.1.1 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX | 0.55 | 42.0 | 4.23e-01 | 81.6% | 90.7% |
| 5060248 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.53 | 39.0 | 4.07e-01 | 81.6% | 87.1% |
| 3247412 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.53 | 43.0 | 3.60e-01 | 90.8% | 73.3% |
| 3328865 | 3788.1.1.0 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) | 0.52 | 36.0 | 3.73e-01 | 72.4% | 87.1% |
| 3695950 | 102.1.3.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain | 0.50 | 38.0 | 3.35e-01 | 85.5% | 60.8% |