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CAKLQF020000002.1__CAH1073756.1__SAMEA5780031_00651__00279
Bact-VirCAKLQF020000002.1__CAH1073756.1__SAMEA5780031_00651__00279
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-93
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03412.22 best | Peptidase_C39 | 35.0 | 1.70e-08 | 87.6% | 40.6% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.88 | 60.0 | 4.87e-01 | 70.4% | 40.4% |
| 1gz0F01 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.65 | 38.0 | 3.73e-01 | 96.3% | 53.5% |
| 1jztA00 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.63 | 57.0 | 4.03e-01 | 100.0% | 42.4% |
| 3dghA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 49.0 | 4.25e-01 | 96.3% | 56.9% |
| 6qkgA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 49.0 | 4.45e-01 | 96.3% | 64.9% |
| 3d3kA00 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.60 | 54.0 | 3.88e-01 | 100.0% | 42.1% |
| 2w4lB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.58 | 47.0 | 3.84e-01 | 100.0% | 46.5% |
| 1iugA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 44.0 | 3.23e-01 | 84.0% | 78.5% |
| 2qi2A03 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.56 | 34.0 | 3.29e-01 | 82.7% | 52.1% |
| 3h11A00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 45.0 | 3.42e-01 | 93.8% | 83.5% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 33.0 | 3.70e-01 | 85.2% | 82.3% |
| 3ceaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 3.70e-01 | 96.3% | 58.4% |
| 2yvqA00 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.52 | 41.0 | 3.49e-01 | 98.8% | 51.5% |
| 3aptA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.52 | 46.0 | 3.18e-01 | 100.0% | 28.1% |
| 3thxA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.51 | 41.0 | 3.30e-01 | 100.0% | 43.0% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 42.0 | 4.43e-01 | 88.9% | 100.0% |
| 6hxqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 43.0 | 3.74e-01 | 96.3% | 83.7% |
| 3ke8A01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.51 | 38.0 | 3.46e-01 | 100.0% | 58.4% |
| 2z0mA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 44.0 | 3.40e-01 | 100.0% | 49.7% |
| 1a9xA08 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.50 | 38.0 | 3.55e-01 | 97.5% | 64.2% |
| 1sbzD00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.50 | 42.0 | 3.32e-01 | 96.3% | 59.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.89 | 61.0 | 4.89e-01 | 70.4% | 39.3% |
| 2444014 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.89 | 61.0 | 4.89e-01 | 70.4% | 40.1% |
| 4562486 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.88 | 60.0 | 4.73e-01 | 70.4% | 36.8% |
| 3962350 | 301.1.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like | 0.67 | 39.0 | 4.17e-01 | 95.1% | 67.1% |
| 5081773 | 301.1.1.5 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › SpoU_sub_bind | 0.66 | 39.0 | 4.08e-01 | 91.4% | 64.0% |
| 3961526 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.65 | 44.0 | 3.75e-01 | 70.4% | 45.0% |
| 3782971 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.63 | 58.0 | 4.03e-01 | 100.0% | 41.5% |
| 5036731 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.62 | 38.0 | 3.65e-01 | 87.7% | 52.6% |
| 3767057 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 49.0 | 5.09e-01 | 95.1% | 96.0% |
| 3789521 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.60 | 53.0 | 3.66e-01 | 100.0% | 38.6% |
| 3586103 | 2004.1.1.435 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_ATPase | 0.59 | 49.0 | 4.07e-01 | 98.8% | 65.6% |
| 4999054 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 52.0 | 4.10e-01 | 97.5% | 63.6% |
| 3428322 | 301.1.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › Ribosomal_L7Ae | 0.59 | 36.0 | 3.33e-01 | 87.7% | 46.7% |
| 4998457 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.59 | 52.0 | 3.42e-01 | 100.0% | 56.9% |
| 3254601 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 49.0 | 4.93e-01 | 95.1% | 95.0% |
| 3648785 | 301.1.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › Ribosomal_L7Ae | 0.58 | 35.0 | 3.62e-01 | 87.7% | 62.8% |
| 5018099 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.57 | 51.0 | 3.57e-01 | 100.0% | 36.5% |
| 5048834 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.57 | 44.0 | 3.56e-01 | 100.0% | 41.8% |
| 5058726 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.56 | 35.0 | 3.43e-01 | 86.4% | 55.9% |
| 5055984 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.55 | 51.0 | 4.21e-01 | 98.8% | 94.1% |
| 3839749 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.55 | 43.0 | 3.76e-01 | 97.5% | 55.8% |
| 3991870 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.55 | 50.0 | 3.47e-01 | 100.0% | 33.8% |
| 4247701 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.55 | 46.0 | 3.49e-01 | 95.1% | 66.5% |
| 5039866 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.54 | 39.0 | 3.57e-01 | 96.3% | 54.8% |
| 4984658 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.53 | 47.0 | 3.70e-01 | 100.0% | 51.2% |
| 3283831 | 9002.1.1.3 ↗ | a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 › Biotin_carb_N | 0.51 | 34.0 | 3.73e-01 | 91.4% | 93.3% |
| 3935022 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.51 | 43.0 | 3.54e-01 | 96.3% | 60.0% |
| 5057427 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.50 | 44.0 | 3.00e-01 | 100.0% | 41.6% |
D2
medium
residues 94-167
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.79 | 66.0 | 5.52e-01 | 100.0% | 53.6% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 51.0 | 5.57e-01 | 86.5% | 90.0% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 49.0 | 5.08e-01 | 90.5% | 76.8% |
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 51.0 | 5.49e-01 | 90.5% | 96.7% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 50.0 | 5.25e-01 | 90.5% | 90.9% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 50.0 | 5.07e-01 | 95.9% | 80.8% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 44.0 | 5.10e-01 | 83.8% | 100.0% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 51.0 | 5.36e-01 | 93.2% | 93.9% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 46.0 | 3.61e-01 | 73.0% | 72.1% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 47.0 | 5.21e-01 | 91.9% | 100.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.64 | 40.0 | 4.73e-01 | 73.0% | 97.9% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 44.0 | 3.29e-01 | 73.0% | 81.7% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.61 | 43.0 | 4.67e-01 | 75.7% | 91.5% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 45.0 | 3.65e-01 | 79.7% | 93.0% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 45.0 | 3.62e-01 | 78.4% | 87.3% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.60 | 52.0 | 4.49e-01 | 97.3% | 61.9% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 42.0 | 3.10e-01 | 73.0% | 79.4% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.60 | 43.0 | 3.85e-01 | 89.2% | 52.3% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 45.0 | 4.11e-01 | 79.7% | 100.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 50.0 | 4.57e-01 | 95.9% | 74.5% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 41.0 | 3.42e-01 | 74.3% | 81.0% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 46.0 | 3.83e-01 | 85.1% | 93.9% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.59 | 48.0 | 3.61e-01 | 95.9% | 34.7% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 51.0 | 3.87e-01 | 100.0% | 50.5% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.16e-01 | 81.1% | 91.1% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.58 | 44.0 | 3.39e-01 | 83.8% | 45.9% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 41.0 | 3.74e-01 | 77.0% | 87.5% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 43.0 | 3.71e-01 | 81.1% | 85.8% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.57 | 40.0 | 3.08e-01 | 77.0% | 85.1% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.57 | 43.0 | 4.52e-01 | 95.9% | 93.9% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.56 | 30.0 | 3.29e-01 | 77.0% | 59.0% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 38.0 | 3.33e-01 | 71.6% | 95.2% |
| 2d9vA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.73e-01 | 81.1% | 87.0% |
| 3e4vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 46.0 | 3.67e-01 | 100.0% | 94.3% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.53e-01 | 83.8% | 93.6% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 3.89e-01 | 91.9% | 96.5% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.54 | 46.0 | 3.67e-01 | 100.0% | 61.5% |
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 45.0 | 3.46e-01 | 94.6% | 84.7% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 40.0 | 3.14e-01 | 86.5% | 35.7% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 44.0 | 3.60e-01 | 95.9% | 98.6% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 46.0 | 4.12e-01 | 98.6% | 98.1% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 43.0 | 3.31e-01 | 93.2% | 87.0% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.45e-01 | 85.1% | 97.7% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.69e-01 | 94.6% | 73.4% |
| 6y43A01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.52 | 45.0 | 3.65e-01 | 98.6% | 74.1% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 43.0 | 2.91e-01 | 98.6% | 51.8% |
| 8ct0B01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.12e-01 | 83.8% | 86.7% |
| 3ghgB02 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.52 | 43.0 | 3.11e-01 | 100.0% | 84.0% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 2.97e-01 | 83.8% | 80.2% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.34e-01 | 91.9% | 46.4% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 44.0 | 2.99e-01 | 98.6% | 51.3% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 39.0 | 3.45e-01 | 85.1% | 76.9% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 41.0 | 3.41e-01 | 94.6% | 47.6% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.51 | 44.0 | 3.62e-01 | 98.6% | 77.0% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.50 | 42.0 | 3.07e-01 | 97.3% | 32.8% |
| 1qxfA00 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.50 | 36.0 | 4.02e-01 | 78.4% | 98.3% |
| 4avaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 39.0 | 3.21e-01 | 100.0% | 44.4% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.82 | 68.0 | 6.04e-01 | 100.0% | 63.8% |
| 3496803 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.78 | 71.0 | 5.46e-01 | 100.0% | 67.3% |
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.77 | 66.0 | 5.20e-01 | 100.0% | 47.6% |
| 4280097 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 56.0 | 6.03e-01 | 95.9% | 98.3% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.72 | 51.0 | 5.68e-01 | 91.9% | 100.0% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 51.0 | 4.88e-01 | 91.9% | 64.7% |
| 4163851 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.72 | 54.0 | 5.88e-01 | 93.2% | 100.0% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 55.0 | 5.81e-01 | 94.6% | 96.9% |
| 1263519 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.69 | 51.0 | 5.49e-01 | 90.5% | 96.8% |
| 4662294 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 48.0 | 5.39e-01 | 87.8% | 100.0% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 51.0 | 5.34e-01 | 93.2% | 90.8% |
| 4985969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 48.0 | 5.23e-01 | 87.8% | 93.3% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 48.0 | 5.37e-01 | 89.2% | 100.0% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 5.30e-01 | 93.2% | 100.0% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.67 | 44.0 | 4.67e-01 | 74.3% | 76.9% |
| 4658938 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.66 | 50.0 | 4.75e-01 | 93.2% | 67.8% |
| 5004476 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 49.0 | 5.13e-01 | 89.2% | 89.2% |
| 5034040 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 5.18e-01 | 86.5% | 100.0% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 48.0 | 4.83e-01 | 90.5% | 77.3% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.66 | 57.0 | 5.57e-01 | 97.3% | 97.5% |
| 4123180 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.66 | 50.0 | 5.04e-01 | 94.6% | 82.7% |
| 5047239 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 51.0 | 5.44e-01 | 94.6% | 100.0% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.65 | 50.0 | 4.92e-01 | 93.2% | 78.8% |
| 4940673 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 48.0 | 5.24e-01 | 91.9% | 100.0% |
| 5001903 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 49.0 | 5.01e-01 | 91.9% | 87.1% |
| 4425420 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.64 | 57.0 | 5.45e-01 | 100.0% | 97.6% |
| 3852545 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 5.06e-01 | 94.6% | 96.7% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.64 | 53.0 | 5.18e-01 | 95.9% | 83.7% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.73e-01 | 79.7% | 84.6% |
| 3922426 | 4.1.1.363 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 | 0.63 | 49.0 | 4.16e-01 | 94.6% | 51.7% |
| 3927363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 41.0 | 4.66e-01 | 82.4% | 98.0% |
| 64 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.63 | 47.0 | 3.78e-01 | 79.7% | 85.8% |
| 4642857 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 53.0 | 5.25e-01 | 97.3% | 100.0% |
| 3996278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 52.0 | 4.38e-01 | 91.9% | 61.7% |
| 5064007 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.60 | 46.0 | 3.56e-01 | 85.1% | 38.3% |
| 3966494 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.59 | 42.0 | 3.72e-01 | 87.8% | 50.9% |
| 3270288 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 45.0 | 4.12e-01 | 83.8% | 86.0% |
| 7384 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.59 | 51.0 | 3.87e-01 | 100.0% | 50.5% |
| 3736175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.22e-01 | 87.8% | 70.6% |
| 3339169 | 4.1.1.415 ↗ | beta barrels › SH3 › SH3 › SH3 › PNPOx_N | 0.58 | 48.0 | 4.67e-01 | 97.3% | 97.6% |
| 3222541 | 4252.1.1.15 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF30558 | 0.57 | 48.0 | 3.52e-01 | 97.3% | 94.2% |
| 3354387 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.56 | 47.0 | 4.57e-01 | 93.2% | 92.9% |
| 5014419 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.56 | 42.0 | 3.08e-01 | 82.4% | 29.8% |
| None | — | 0.56 | 46.0 | 3.12e-01 | 100.0% | 52.3% | |
| 4302902 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.56 | 44.0 | 3.74e-01 | 89.2% | 94.6% |
| 3694265 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.55 | 48.0 | 3.98e-01 | 98.6% | 84.4% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 47.0 | 4.71e-01 | 95.9% | 100.0% |
| 3411079 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.54 | 41.0 | 3.14e-01 | 82.4% | 76.7% |
| 3704231 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 48.0 | 4.14e-01 | 100.0% | 84.3% |
| 3283078 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.54 | 41.0 | 3.36e-01 | 85.1% | 94.6% |
| 3600855 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 45.0 | 2.88e-01 | 98.6% | 52.6% |
| 3276495 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 44.0 | 2.93e-01 | 98.6% | 48.8% |
| 3184022 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.53 | 46.0 | 3.86e-01 | 98.6% | 99.2% |
| 3838513 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 40.0 | 2.92e-01 | 83.8% | 62.1% |
| 3281870 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 45.0 | 3.79e-01 | 100.0% | 59.3% |
| 3279818 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.52 | 40.0 | 3.30e-01 | 86.5% | 75.0% |
| 4463780 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.51 | 39.0 | 3.49e-01 | 83.8% | 92.7% |
| 5047766 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 42.0 | 3.75e-01 | 95.9% | 63.5% |
| 3637819 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 42.0 | 3.64e-01 | 93.2% | 96.7% |
| 3536857 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.51 | 38.0 | 3.04e-01 | 83.8% | 87.9% |
| 4521227 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.50 | 42.0 | 3.76e-01 | 97.3% | 65.2% |
| 3967782 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.50 | 43.0 | 3.66e-01 | 100.0% | 62.3% |
| 3630851 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.50 | 42.0 | 2.73e-01 | 98.6% | 38.0% |
| 3234434 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.50 | 42.0 | 3.00e-01 | 100.0% | 64.4% |
| 3270102 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.50 | 38.0 | 2.44e-01 | 83.8% | 19.5% |