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CAKLQF020000003.1__CAH1076126.1__SAMEA5780031_00678__00014

Bact-Vir

CAKLQF020000003.1__CAH1076126.1__SAMEA5780031_00678__00014

Identity

Kingdom:
phage

Quality

96.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 91-164
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yb1A02 1.10.150.650 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.91 72.0 7.32e-01 85.1% 84.9%
3e0fA02 1.10.150.650 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.84 68.0 6.85e-01 85.1% 85.1%
1yz6A02 1.10.150.190 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 0.64 56.0 5.31e-01 100.0% 94.3%
2wapA00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.60 49.0 2.90e-01 87.8% 17.6%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.60 45.0 4.26e-01 81.1% 95.6%
2o71A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.59 45.0 4.26e-01 83.8% 94.5%
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.59 45.0 4.37e-01 85.1% 90.5%
2g8lA02 1.10.285.20 Mainly Alpha › Orthogonal Bundle › Glutamate Dehydrogenase; Chain A, domain 3 › Uncharacterised protein PF01937, DUF89, domain 2 0.58 43.0 4.56e-01 81.1% 95.4%
2mpcA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.58 44.0 4.15e-01 82.4% 95.6%
1wxpA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.57 44.0 4.22e-01 82.4% 96.4%
2p9xA00 1.10.1200.200 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 0.57 46.0 4.25e-01 90.5% 68.4%
1uz3B00 1.10.1240.40 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › ENT domain 0.57 46.0 4.23e-01 87.8% 94.8%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.56 50.0 4.37e-01 100.0% 85.7%
1of9A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.56 38.0 3.84e-01 71.6% 75.3%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 43.0 3.74e-01 85.1% 95.7%
3qvsA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 42.0 2.85e-01 83.8% 74.2%
3c2bA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 43.0 3.47e-01 91.9% 98.6%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1834356 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.92 85.0 5.51e-01 100.0% 26.0%
3679843 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.91 86.0 5.24e-01 100.0% 19.5%
5048383 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.88 83.0 5.38e-01 100.0% 26.4%
5030578 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.82 76.0 4.97e-01 100.0% 28.1%
4681451 171.1.1.9 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 0.70 54.0 3.79e-01 83.8% 84.3%
4160692 171.1.1.1 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.65 50.0 3.58e-01 83.8% 78.2%
3930165 110.1.1.0 alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.62 43.0 3.99e-01 87.8% 55.0%
4964045 5058.1.1.16 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 0.59 45.0 4.28e-01 79.7% 94.1%
4940271 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.57 44.0 4.13e-01 82.4% 77.8%
4940618 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.57 44.0 4.32e-01 82.4% 87.5%
4660622 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.56 48.0 3.44e-01 100.0% 77.6%
3628831 103.1.1.142 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_Sid-3 0.56 40.0 4.10e-01 77.0% 94.5%
4996194 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.55 44.0 4.14e-01 86.5% 96.7%
5052146 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 46.0 3.37e-01 100.0% 96.7%
5035107 3922.1.1.358 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF26119 0.55 49.0 4.22e-01 100.0% 93.9%
3907089 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.54 48.0 4.83e-01 98.6% 100.0%
5010044 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.52 46.0 4.27e-01 100.0% 96.8%
D2 medium residues 1-63_248-283
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02811.27 best PHP 50.6 4.00e-13 90.9% 41.5%
CATH (85)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yb1A01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.91 87.0 6.51e-01 99.0% 94.8%
3o0fA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.86 82.0 6.15e-01 100.0% 94.4%
2hnhA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.84 79.0 5.59e-01 100.0% 97.8%
3f2bA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.80 73.0 5.31e-01 98.0% 99.6%
3e38B01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.78 73.0 5.31e-01 99.0% 87.3%
3b0xA05 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.78 72.0 5.28e-01 100.0% 94.4%
2anuA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.75 70.0 5.25e-01 100.0% 93.3%
3e0lA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.70 63.0 4.41e-01 99.0% 99.4%
2i9uA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.69 62.0 4.36e-01 99.0% 99.0%
2icsA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.69 62.0 4.49e-01 99.0% 99.6%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 51.0 4.57e-01 79.8% 100.0%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 52.0 4.68e-01 81.8% 96.3%
1a3wA02 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.67 55.0 4.19e-01 89.9% 100.0%
2j6pA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.66 46.0 4.04e-01 70.7% 73.8%
1aq0A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 51.0 3.59e-01 82.8% 100.0%
1yx1A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.65 54.0 4.01e-01 89.9% 100.0%
3qtgA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.65 52.0 3.92e-01 86.9% 97.5%
3aptA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.64 50.0 3.62e-01 83.8% 93.2%
1x7dA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 52.0 4.33e-01 86.9% 93.5%
3rkuA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 51.0 3.78e-01 86.9% 87.3%
4pqgA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.64 52.0 4.29e-01 86.9% 87.4%
4nbrA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 51.0 3.72e-01 84.8% 85.1%
3i3oG00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 51.0 3.81e-01 84.8% 84.9%
4y7uA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.64 53.0 4.10e-01 90.9% 76.8%
4fc7D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 50.0 3.70e-01 84.8% 84.2%
6pznB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 50.0 3.78e-01 83.8% 92.5%
3o38B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 50.0 3.83e-01 84.8% 87.7%
4ospD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 50.0 3.78e-01 84.8% 91.0%
3ai2A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 50.0 3.70e-01 84.8% 90.9%
5l3qA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 48.0 3.86e-01 81.8% 84.0%
4jd0A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.63 53.0 4.00e-01 91.9% 73.1%
1ipaA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.63 50.0 4.28e-01 83.8% 94.1%
4is2A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 49.0 3.88e-01 84.8% 92.1%
1vb5B02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 48.0 3.93e-01 80.8% 86.2%
1b5tA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.63 49.0 3.64e-01 84.8% 96.4%
3a11B02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 48.0 3.84e-01 80.8% 83.2%
3ausA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 49.0 3.68e-01 84.8% 87.8%
6fnuA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.62 49.0 3.51e-01 84.8% 92.9%
3ecsD02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.62 47.0 3.77e-01 80.8% 81.1%
1losA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 49.0 3.87e-01 86.9% 96.8%
3ajdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 49.0 3.94e-01 85.9% 92.8%
2vsyA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 49.0 4.07e-01 86.9% 83.2%
1q6oB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 50.0 3.92e-01 89.9% 99.1%
3kwsA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.61 50.0 3.69e-01 89.9% 99.2%
3f4wA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 49.0 3.92e-01 89.9% 100.0%
2z86D01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.61 50.0 3.55e-01 92.9% 53.3%
6oz7B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 49.0 3.75e-01 88.9% 54.2%
4bmvI00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 49.0 3.64e-01 88.9% 50.0%
4nzpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 48.0 4.33e-01 86.9% 81.2%
1q7zA01 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.60 52.0 3.72e-01 97.0% 93.0%
3bzbB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 47.0 3.77e-01 85.9% 80.0%
3op2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 48.0 3.66e-01 88.9% 90.1%
1yt8A04 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.59 45.0 4.44e-01 81.8% 86.9%
2zadA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 52.0 3.95e-01 97.0% 81.7%
1snyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 45.0 3.44e-01 83.8% 92.7%
2f9fA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 46.0 3.96e-01 86.9% 85.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 45.0 3.37e-01 82.8% 51.2%
2pn1A01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 45.0 4.15e-01 80.8% 96.7%
2p2sA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 46.0 4.15e-01 85.9% 96.4%
3lyeA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.57 53.0 3.75e-01 100.0% 65.6%
7fg9A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 46.0 3.99e-01 88.9% 88.9%
4kp7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 46.0 3.98e-01 86.9% 78.1%
2ps2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 51.0 3.87e-01 100.0% 78.6%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 45.0 3.83e-01 87.9% 79.8%
4j9jA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 50.0 3.79e-01 96.0% 92.5%
2gfhA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 46.0 4.00e-01 90.9% 95.6%
3il0A00 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.56 39.0 3.58e-01 70.7% 87.5%
3e18A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 44.0 4.06e-01 86.9% 97.1%
2xryA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 44.0 3.94e-01 86.9% 80.4%
2d13A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 45.0 4.29e-01 87.9% 89.5%
3thxA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.55 45.0 3.86e-01 90.9% 90.9%
3s99A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 50.0 4.52e-01 100.0% 90.4%
6fcxA01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.55 47.0 3.37e-01 92.9% 71.5%
3hjgA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.54 45.0 3.66e-01 93.9% 93.6%
4r9xA00 3.20.20.380 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain 0.54 44.0 3.51e-01 92.9% 92.4%
2pgeA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.54 47.0 3.61e-01 97.0% 82.1%
4m1bA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.53 45.0 3.70e-01 98.0% 93.5%
1lt7B00 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.53 49.0 3.37e-01 100.0% 37.5%
2qv7A01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.53 48.0 4.20e-01 100.0% 82.1%
1yqeA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.53 45.0 4.61e-01 98.0% 96.9%
4u63A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 46.0 3.87e-01 100.0% 81.0%
1efaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 47.0 4.34e-01 100.0% 91.3%
4djaA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 41.0 3.56e-01 88.9% 73.6%
3mfqA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 45.0 4.09e-01 100.0% 91.1%
7wmzC01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.51 43.0 3.20e-01 97.0% 92.6%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3980738 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.93 90.0 6.15e-01 100.0% 97.5%
1834356 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.91 87.0 5.99e-01 99.0% 97.2%
4245601 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.91 76.0 5.34e-01 85.9% 100.0%
5006867 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.88 79.0 5.98e-01 93.9% 100.0%
5001833 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.88 78.0 5.46e-01 92.9% 99.3%
3679843 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.87 83.0 5.38e-01 100.0% 82.1%
5062294 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.87 83.0 5.75e-01 100.0% 97.2%
3280356 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.87 84.0 5.69e-01 100.0% 95.9%
5048698 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.87 81.0 5.58e-01 98.0% 100.0%
4957553 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.85 80.0 5.52e-01 99.0% 99.0%
4240120 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.85 80.0 5.66e-01 100.0% 97.7%
4508942 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.85 79.0 5.75e-01 100.0% 98.4%
4645572 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.85 79.0 5.68e-01 100.0% 94.6%
5044659 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.85 77.0 5.79e-01 96.0% 99.1%
5013570 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.84 77.0 5.83e-01 97.0% 99.1%
4402535 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.84 79.0 5.69e-01 100.0% 97.3%
5048383 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.84 80.0 5.58e-01 100.0% 97.9%
5030578 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.84 76.0 5.27e-01 94.9% 100.0%
5046412 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.84 74.0 5.36e-01 92.9% 89.0%
4970992 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.84 78.0 5.83e-01 98.0% 99.1%
3590785 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.84 78.0 5.64e-01 100.0% 98.8%
3969370 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.84 77.0 5.61e-01 98.0% 98.0%
4042253 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.84 78.0 5.61e-01 100.0% 98.5%
4176786 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.83 77.0 5.34e-01 100.0% 97.7%
4226067 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.83 77.0 5.47e-01 100.0% 98.5%
4370676 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.83 77.0 5.54e-01 100.0% 97.3%
4055015 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.83 77.0 5.76e-01 100.0% 97.3%
4081292 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.83 77.0 5.60e-01 100.0% 98.4%
3952074 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.82 76.0 5.29e-01 100.0% 95.3%
4501664 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.82 77.0 5.24e-01 100.0% 94.6%
3838289 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.82 76.0 5.32e-01 100.0% 94.8%
4277369 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.82 76.0 5.32e-01 100.0% 95.2%
5024121 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.81 77.0 5.64e-01 100.0% 99.6%
4032341 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.81 75.0 5.59e-01 99.0% 97.4%
5019625 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.81 75.0 5.53e-01 100.0% 96.2%
4966300 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.81 74.0 5.58e-01 98.0% 96.4%
5068503 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.81 77.0 5.73e-01 99.0% 86.5%
4993044 2002.1.1.77 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 0.80 74.0 5.62e-01 99.0% 100.0%
5037183 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.80 74.0 5.61e-01 100.0% 97.7%
3291446 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.80 74.0 5.41e-01 100.0% 94.4%
5078599 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.79 70.0 5.19e-01 92.9% 96.5%
5022281 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.79 74.0 5.54e-01 100.0% 96.4%
4942806 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.79 76.0 5.94e-01 100.0% 98.4%
5076565 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.79 74.0 5.65e-01 99.0% 95.6%
4936359 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.79 74.0 5.09e-01 99.0% 66.8%
4943473 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.78 73.0 5.55e-01 100.0% 98.6%
5062103 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.78 73.0 5.45e-01 99.0% 85.3%
4950934 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.78 73.0 5.46e-01 99.0% 78.6%
5007897 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.78 74.0 5.61e-01 100.0% 87.0%
4973359 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.78 74.0 5.67e-01 100.0% 94.0%
4931709 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.78 74.0 5.46e-01 100.0% 83.6%
4941267 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.77 73.0 5.51e-01 99.0% 90.5%
4984436 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.77 73.0 5.56e-01 99.0% 88.8%
4963224 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.77 73.0 5.56e-01 100.0% 88.1%
4964100 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.77 72.0 5.37e-01 99.0% 84.9%
5050908 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.77 73.0 5.17e-01 100.0% 78.9%
4953955 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.77 72.0 5.41e-01 99.0% 86.8%
4992997 2002.1.1.77 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 0.77 71.0 5.30e-01 100.0% 93.6%
4929909 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.77 72.0 5.51e-01 99.0% 88.8%
5017280 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.77 73.0 5.04e-01 100.0% 68.3%
5058036 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.77 72.0 5.64e-01 100.0% 94.4%
5069848 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.77 73.0 5.53e-01 100.0% 85.6%
4982129 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.77 72.0 5.24e-01 100.0% 90.6%
2956521 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.77 60.0 6.04e-01 93.9% 80.6%
4946624 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.77 72.0 5.28e-01 100.0% 88.3%
3588147 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.76 72.0 4.57e-01 100.0% 60.9%
3261401 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.76 72.0 5.18e-01 100.0% 86.0%
3734831 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.76 71.0 5.41e-01 100.0% 95.7%
5039089 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.75 71.0 5.51e-01 100.0% 97.4%
5058088 2002.1.1.77 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 0.75 69.0 5.14e-01 100.0% 93.2%
5010512 2002.1.1.172 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C 0.72 68.0 5.19e-01 99.0% 87.3%
5073948 2002.1.1.77 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 0.72 66.0 5.02e-01 100.0% 99.1%
4929465 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.71 65.0 4.44e-01 100.0% 84.1%
4987492 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.71 65.0 4.52e-01 100.0% 83.5%
3510874 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.70 51.0 4.61e-01 76.8% 98.5%
4945769 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.69 62.0 4.29e-01 100.0% 83.2%
4504577 65.1.1.8 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › EF_0837-like_N 0.69 62.0 4.35e-01 100.0% 85.1%
8941 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.69 62.0 4.49e-01 99.0% 99.6%
4945877 2488.1.1.4 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Trm56 0.66 52.0 4.48e-01 84.8% 89.4%
5027901 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.66 53.0 4.33e-01 86.9% 78.9%
5023090 7570.1.1.0 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain 0.66 48.0 4.32e-01 75.8% 80.7%
5050925 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.66 58.0 3.94e-01 100.0% 71.1%
4305337 7512.1.1.117 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28, Glyco_tran_28_C 0.64 51.0 3.49e-01 86.9% 41.6%
4931922 2002.1.1.441 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RraA-like 0.64 53.0 3.47e-01 89.9% 50.5%
3688367 2003.1.7.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B 0.62 47.0 3.64e-01 79.8% 87.3%
4983429 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.61 47.0 3.43e-01 82.8% 59.6%
147501 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.61 49.0 3.88e-01 89.9% 98.2%
4963292 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.60 53.0 3.70e-01 100.0% 91.7%
4977476 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.60 47.0 3.39e-01 82.8% 60.4%
4944022 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.57 52.0 3.98e-01 98.0% 83.2%
3176532 2484.1.1.205 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27035 0.55 46.0 3.77e-01 93.9% 79.5%
3797618 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.55 50.0 4.11e-01 100.0% 73.1%
3793098 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.55 50.0 4.20e-01 100.0% 75.8%
5023166 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.52 46.0 4.04e-01 98.0% 89.0%
D3 medium residues 64-90_187-247
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yb1A01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.79 73.0 5.39e-01 100.0% 49.8%
3o0fA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.78 73.0 5.32e-01 100.0% 49.8%
1ufhA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 58.0 4.82e-01 95.5% 55.5%
1qsmD00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 58.0 4.82e-01 95.5% 65.8%
3mz2A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.65 46.0 3.23e-01 75.0% 34.0%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 53.0 4.00e-01 100.0% 37.6%
2dxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 55.0 4.67e-01 96.6% 64.6%
1afsA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.64 48.0 3.22e-01 79.5% 23.8%
3r3pB00 3.40.960.10 Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease 0.63 41.0 3.95e-01 79.5% 59.2%
4n4pD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 57.0 3.93e-01 100.0% 31.6%
3qyqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 56.0 3.96e-01 100.0% 50.2%
3qokA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 54.0 3.75e-01 96.6% 42.1%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.62 46.0 4.57e-01 97.7% 75.8%
3bg3A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 55.0 3.72e-01 100.0% 39.9%
1c4oA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 44.0 3.57e-01 77.3% 77.7%
1w5dA02 3.50.80.20 Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 0.59 46.0 4.41e-01 84.1% 76.5%
4mmoA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 52.0 3.72e-01 100.0% 70.7%
4dapA02 3.40.1350.60 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.59 52.0 4.39e-01 100.0% 67.1%
1lt7B00 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.59 53.0 3.60e-01 100.0% 36.5%
3cyjA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 53.0 3.86e-01 100.0% 44.7%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.59 43.0 4.19e-01 97.7% 70.8%
1kczA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.58 51.0 3.83e-01 100.0% 45.7%
3bofA02 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.58 51.0 3.71e-01 100.0% 46.5%
4qbnA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.58 40.0 3.93e-01 79.5% 66.7%
2b3fA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 39.0 3.08e-01 70.5% 82.2%
3l23A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.57 49.0 3.56e-01 100.0% 43.3%
3dmyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 41.0 3.50e-01 100.0% 46.9%
4do4A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 51.0 3.54e-01 100.0% 94.5%
6gvdA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 3.39e-01 100.0% 35.4%
2qgyA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 50.0 3.68e-01 100.0% 44.1%
3mcaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 46.0 3.86e-01 90.9% 91.1%
1tkkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 50.0 3.66e-01 100.0% 43.0%
1hqz800 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.56 41.0 3.64e-01 78.4% 70.5%
3q9cA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.56 48.0 3.30e-01 98.9% 37.2%
1tzzA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 50.0 3.58e-01 100.0% 40.2%
6ki3A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.56 48.0 3.42e-01 100.0% 32.5%
6ketA01 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.55 46.0 3.18e-01 97.7% 50.1%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 3.30e-01 100.0% 68.5%
1to3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 47.0 3.35e-01 100.0% 41.2%
1dbqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 41.0 3.60e-01 81.8% 54.5%
2g3mA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 49.0 3.19e-01 100.0% 41.2%
5c3uA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 38.0 3.78e-01 89.8% 68.8%
7whfC02 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.54 39.0 3.76e-01 77.3% 86.0%
7qqfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 46.0 3.20e-01 100.0% 52.8%
5e7pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 3.70e-01 96.6% 80.9%
5gizA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 34.0 3.12e-01 95.5% 48.1%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.77e-01 100.0% 78.1%
4wpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 3.41e-01 100.0% 64.1%
6hxqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 3.84e-01 100.0% 65.1%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5001833 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.87 82.0 5.56e-01 100.0% 64.7%
3980738 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.87 82.0 5.53e-01 100.0% 62.1%
5062294 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.84 79.0 5.33e-01 100.0% 62.1%
3280356 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.80 74.0 5.02e-01 100.0% 61.6%
4957553 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.79 73.0 4.96e-01 100.0% 66.1%
1834356 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.79 73.0 4.99e-01 100.0% 63.3%
5057354 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.78 71.0 4.80e-01 100.0% 68.7%
3211161 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.71 47.0 3.87e-01 80.7% 37.5%
3969363 2002.1.1.97 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI 0.70 48.0 3.70e-01 75.0% 32.6%
3798371 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 46.0 3.65e-01 80.7% 33.0%
3577613 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.69 46.0 3.53e-01 80.7% 30.0%
4094811 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.67 51.0 3.77e-01 100.0% 31.6%
4972341 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 60.0 4.14e-01 100.0% 54.5%
3600200 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 49.0 3.64e-01 79.5% 52.0%
4951733 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.64 54.0 4.64e-01 95.5% 65.5%
3839988 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.63 48.0 3.89e-01 80.7% 52.7%
3587151 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.63 55.0 4.99e-01 100.0% 72.5%
5011200 2004.1.1.211 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P 0.62 46.0 3.61e-01 78.4% 57.9%
5073063 2004.1.1.163 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 0.62 47.0 3.75e-01 80.7% 46.1%
4952299 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 52.0 4.14e-01 93.2% 90.6%
3884122 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.62 52.0 3.55e-01 92.0% 75.5%
4947261 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.62 52.0 4.01e-01 94.3% 76.0%
141372 2008.2.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo 0.62 46.0 4.57e-01 97.7% 75.8%
1409343 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.61 55.0 3.61e-01 100.0% 34.2%
3363171 2002.1.1.11 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK 0.61 54.0 4.36e-01 98.9% 68.8%
3266685 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.61 44.0 2.44e-01 76.1% 9.9%
3588147 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.60 53.0 3.44e-01 100.0% 45.6%
3578686 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.60 45.0 3.49e-01 80.7% 38.5%
3749861 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.59 44.0 3.55e-01 80.7% 44.6%
5030224 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 51.0 4.89e-01 100.0% 89.5%
3484889 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.58 44.0 3.60e-01 80.7% 49.1%
3357529 2008.1.1.120 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HHH_5 0.58 52.0 3.90e-01 100.0% 49.3%
3695595 207.1.1.198 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF29247 0.58 48.0 3.46e-01 96.6% 39.7%
3510978 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.58 42.0 3.92e-01 78.4% 64.3%
2723561 2002.1.1.76 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.58 52.0 3.60e-01 100.0% 42.1%
4988165 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 48.0 3.93e-01 95.5% 62.9%
4071654 2004.1.1.334 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 43.0 3.60e-01 80.7% 45.8%
3596245 232.1.1.0 a+b duplicates or obligate multimers › Pentein › Pentein › Pentein 0.57 42.0 3.00e-01 80.7% 91.9%
95373 2002.1.1.100 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA 0.57 50.0 3.75e-01 100.0% 47.6%
165019 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.56 50.0 3.63e-01 100.0% 42.0%
3406956 224.1.1.1 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.55 40.0 3.54e-01 78.4% 68.9%
1201012 2003.1.1.74 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glu_dehyd_C 0.55 40.0 3.59e-01 78.4% 59.4%
4162553 2004.1.1.211 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P 0.54 47.0 3.61e-01 100.0% 58.2%
3888228 2006.1.6.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.54 47.0 3.38e-01 100.0% 40.0%
3905564 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 47.0 3.66e-01 100.0% 47.5%
5023070 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.53 47.0 4.09e-01 98.9% 81.5%
3957968 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.53 46.0 3.20e-01 96.6% 35.9%
3404624 2002.1.1.45 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd 0.52 46.0 3.15e-01 100.0% 32.4%
5067558 2003.1.1.32 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding 0.52 44.0 3.83e-01 100.0% 60.0%
3459995 207.1.1.102 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.50 44.0 3.36e-01 100.0% 45.0%