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CAKLQF020000003.1__CAH1076408.1__SAMEA5780031_00774__00108

Bact-Vir

CAKLQF020000003.1__CAH1076408.1__SAMEA5780031_00774__00108

Identity

Kingdom:
phage

Quality

96.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-77
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08327.18 best AHSA1 47.9 2.10e-12 84.4% 46.4%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.99 94.0 7.31e-01 97.4% 52.4%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.93 86.0 6.47e-01 98.7% 46.0%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.91 83.0 6.39e-01 97.4% 48.1%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.90 83.0 6.19e-01 98.7% 43.6%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.90 80.0 6.08e-01 97.4% 44.5%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.87 78.0 6.06e-01 97.4% 48.4%
2lf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.85 77.0 5.80e-01 98.7% 43.4%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.83 73.0 5.88e-01 96.1% 52.1%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.78 71.0 5.60e-01 100.0% 50.3%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.63 44.0 4.91e-01 76.6% 95.0%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 55.0 3.79e-01 100.0% 36.6%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 55.0 3.79e-01 100.0% 35.3%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 54.0 3.70e-01 100.0% 35.2%
4hrvA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.61 41.0 3.46e-01 70.1% 73.4%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 51.0 3.86e-01 92.2% 43.2%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 53.0 3.66e-01 100.0% 36.9%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 53.0 3.62e-01 100.0% 34.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 4.44e-01 71.4% 90.5%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 52.0 3.61e-01 100.0% 35.3%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.60 42.0 3.46e-01 74.0% 70.3%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 3.69e-01 92.2% 64.6%
1jmxB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 43.0 2.85e-01 80.5% 17.7%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 52.0 4.65e-01 100.0% 99.1%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 50.0 3.51e-01 100.0% 35.5%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.58 45.0 4.05e-01 85.7% 87.3%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 43.0 3.61e-01 83.1% 49.0%
3bnvD00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 43.0 3.58e-01 83.1% 87.4%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.57 41.0 3.75e-01 75.3% 68.6%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.57 45.0 4.13e-01 90.9% 94.5%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 39.0 3.39e-01 72.7% 84.6%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 39.0 3.36e-01 72.7% 85.7%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.49e-01 87.0% 48.3%
5lf5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 3.69e-01 72.7% 88.2%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 49.0 3.36e-01 100.0% 90.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 4.25e-01 87.0% 87.0%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 31.0 3.48e-01 89.6% 70.7%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.55 39.0 3.78e-01 74.0% 67.4%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 4.15e-01 80.5% 89.4%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 4.03e-01 72.7% 92.1%
3oq3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.45e-01 72.7% 82.5%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.54 38.0 3.21e-01 72.7% 75.6%
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.54 44.0 3.58e-01 90.9% 94.0%
3mbhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 44.0 3.08e-01 93.5% 83.0%
4blqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 3.17e-01 96.1% 67.4%
1gofA02 2.130.10.80 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Galactose oxidase/kelch, beta-propeller 0.54 42.0 2.70e-01 85.7% 32.5%
1e50B00 2.40.250.10 Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit 0.53 44.0 3.80e-01 96.1% 70.8%
4frwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.69e-01 79.2% 86.5%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 39.0 2.97e-01 79.2% 83.4%
3oc4B03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 36.0 3.16e-01 70.1% 76.9%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.53 43.0 2.78e-01 88.3% 82.7%
1u14A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.52 39.0 3.17e-01 83.1% 83.4%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 38.0 2.64e-01 77.9% 31.3%
1jcfA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 37.0 3.72e-01 74.0% 98.7%
3ii7A00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.50 39.0 2.81e-01 90.9% 95.8%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 32.0 3.34e-01 87.0% 70.4%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
6321 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.99 93.0 7.32e-01 97.4% 53.6%
6317 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.93 86.0 6.47e-01 98.7% 46.0%
5075975 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.92 85.0 6.36e-01 98.7% 44.1%
143630 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.90 83.0 6.28e-01 98.7% 45.7%
143050 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.90 80.0 6.18e-01 97.4% 46.8%
408353 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.87 78.0 6.07e-01 97.4% 48.7%
142587 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.83 73.0 6.00e-01 96.1% 55.1%
3812932 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.72 64.0 4.96e-01 100.0% 60.0%
3174442 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 47.0 3.23e-01 74.0% 36.2%
3611209 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.65 47.0 3.37e-01 76.6% 31.1%
4025190 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.64 44.0 4.99e-01 74.0% 100.0%
3938060 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 47.0 3.61e-01 79.2% 34.3%
3716829 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.64 46.0 4.18e-01 76.6% 66.7%
3479746 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.62 55.0 3.67e-01 98.7% 37.7%
4937869 3414.1.1.0 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.62 47.0 4.62e-01 85.7% 74.1%
3736443 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.62 43.0 2.81e-01 71.4% 66.3%
4234615 330.4.1.0 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.62 42.0 4.27e-01 72.7% 72.0%
3531262 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.61 54.0 3.61e-01 100.0% 35.1%
4048220 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.61 41.0 4.05e-01 74.0% 66.3%
5060691 4018.1.1.3 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase_glpX 0.61 43.0 3.39e-01 75.3% 78.2%
4460237 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.60 43.0 4.41e-01 75.3% 77.3%
3917054 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.60 44.0 3.84e-01 79.2% 82.4%
5047088 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.60 43.0 3.10e-01 75.3% 26.8%
5055261 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 46.0 3.09e-01 83.1% 45.2%
4262169 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.60 42.0 4.01e-01 75.3% 65.6%
4416182 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.59 43.0 3.95e-01 77.9% 69.5%
3513352 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.59 44.0 3.87e-01 79.2% 79.1%
4863266 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 41.0 4.39e-01 87.0% 86.2%
4973433 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.58 41.0 3.96e-01 75.3% 65.6%
5039841 330.1.1.36 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › ERF 0.58 43.0 3.83e-01 97.4% 55.5%
3547995 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.58 42.0 3.96e-01 77.9% 81.1%
4929503 316.1.1.18 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.57 49.0 3.59e-01 94.8% 40.0%
3855534 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 42.0 3.59e-01 79.2% 60.0%
4058654 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.57 40.0 3.74e-01 74.0% 59.6%
3554828 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.57 42.0 3.86e-01 77.9% 77.0%
3811861 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.57 48.0 3.14e-01 94.8% 96.0%
4373556 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.57 44.0 3.35e-01 84.4% 42.1%
4528690 7503.1.1.21 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF30731 0.57 40.0 3.62e-01 75.3% 72.7%
3564163 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 47.0 3.02e-01 96.1% 78.8%
4961150 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.56 40.0 3.80e-01 75.3% 63.4%
4942589 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.56 41.0 4.31e-01 80.5% 88.6%
3480111 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 40.0 3.95e-01 76.6% 91.8%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.55 40.0 4.19e-01 81.8% 85.7%
2698437 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 43.0 3.56e-01 87.0% 67.4%
5041343 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 37.0 3.73e-01 70.1% 82.7%
3483489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 40.0 4.12e-01 84.4% 84.0%
4216580 298.1.1.8 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.54 44.0 3.22e-01 93.5% 79.6%
3927751 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 47.0 4.24e-01 93.5% 95.0%
1157155 298.1.1.8 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.53 39.0 2.88e-01 79.2% 76.8%
4945114 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.53 42.0 3.24e-01 90.9% 73.0%
3401205 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 42.0 2.65e-01 89.6% 80.4%
5063612 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.52 44.0 3.44e-01 98.7% 66.3%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.52 39.0 3.93e-01 84.4% 78.8%
4997059 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.52 40.0 4.08e-01 84.4% 86.7%
2771632 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.52 42.0 3.35e-01 97.4% 59.3%
4977909 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.51 40.0 3.63e-01 93.5% 60.0%
4028777 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.51 42.0 2.51e-01 92.2% 97.2%
5044346 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 39.0 3.60e-01 98.7% 60.9%
3970395 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.51 40.0 2.96e-01 85.7% 60.0%
3268550 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.51 43.0 3.31e-01 98.7% 62.3%
4116159 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.51 38.0 3.65e-01 89.6% 68.9%
3973592 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.50 41.0 3.24e-01 97.4% 61.9%
3510604 11.1.1.922 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28429 0.50 40.0 3.65e-01 90.9% 90.9%
D2 medium residues 78-144
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08327.18 best AHSA1 33.0 8.60e-08 98.5% 53.6%
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 1.00 97.0 7.20e-01 100.0% 46.9%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.88 81.0 6.26e-01 100.0% 51.1%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.86 74.0 5.50e-01 100.0% 39.1%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.85 78.0 6.16e-01 100.0% 52.0%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.84 77.0 5.89e-01 98.5% 49.6%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.80 74.0 5.77e-01 100.0% 50.7%
1x53A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.79 72.0 5.68e-01 100.0% 51.1%
3oh8A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.78 70.0 5.45e-01 100.0% 47.1%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.74 66.0 5.09e-01 100.0% 87.2%
2ebmA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.71 61.0 5.00e-01 97.0% 70.3%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.71 62.0 4.90e-01 100.0% 49.0%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 61.0 4.66e-01 100.0% 47.6%
1z01A01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.70 62.0 4.08e-01 100.0% 56.2%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.68 54.0 3.61e-01 86.6% 25.8%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.68 47.0 3.75e-01 71.6% 39.8%
3mnmA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.68 50.0 4.24e-01 98.5% 47.3%
3gcfA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.66 58.0 3.92e-01 100.0% 82.3%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.64 49.0 5.25e-01 98.5% 93.2%
4mh4A02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.63 55.0 4.96e-01 98.5% 90.4%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.63 52.0 3.83e-01 100.0% 71.0%
2ql8A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.62 52.0 4.23e-01 98.5% 59.3%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.62 46.0 4.82e-01 86.6% 94.7%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.61 46.0 4.69e-01 85.1% 86.2%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.60 51.0 3.89e-01 95.5% 82.2%
2yh6D00 3.30.530.50 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.60 51.0 4.39e-01 97.0% 86.4%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.86e-01 79.1% 59.6%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.60 49.0 3.95e-01 98.5% 89.3%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.60 46.0 4.74e-01 86.6% 90.6%
6mrfA00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.59 51.0 3.51e-01 98.5% 55.5%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.59 42.0 4.37e-01 100.0% 83.3%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.58 49.0 4.20e-01 97.0% 56.6%
1f21A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 40.0 3.03e-01 70.1% 92.8%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 49.0 3.85e-01 100.0% 74.5%
2be3B01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.57 48.0 3.95e-01 100.0% 84.4%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.56 49.0 3.97e-01 100.0% 78.7%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 46.0 3.73e-01 91.0% 68.8%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.55 43.0 3.89e-01 92.5% 79.4%
2zsgA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.54 45.0 3.26e-01 100.0% 51.8%
1m6kA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 46.0 3.17e-01 97.0% 91.2%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.15e-01 80.6% 98.6%
1fuwA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.66e-01 98.5% 58.2%
4kh9B02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.54 47.0 3.94e-01 97.0% 68.1%
1cjxB02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 47.0 3.37e-01 100.0% 69.3%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.53 44.0 3.28e-01 94.0% 76.8%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 37.0 3.06e-01 77.6% 53.3%
3ua3A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.52 46.0 3.27e-01 98.5% 53.7%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 43.0 2.77e-01 97.0% 48.6%
1t3yA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.52 42.0 3.49e-01 94.0% 63.4%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.52 44.0 3.60e-01 97.0% 93.2%
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.52 41.0 3.69e-01 86.6% 80.6%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.17e-01 80.6% 66.4%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.52 46.0 3.82e-01 100.0% 62.3%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 42.0 3.54e-01 95.5% 70.7%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 43.0 3.67e-01 100.0% 100.0%
3kxwA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.51 43.0 3.60e-01 98.5% 58.1%
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 40.0 2.89e-01 95.5% 53.7%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 34.0 3.35e-01 70.1% 81.1%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 42.0 2.66e-01 98.5% 22.5%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987228 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.88 72.0 5.25e-01 100.0% 34.9%
3630050 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.81 74.0 5.55e-01 100.0% 44.5%
3962216 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.79 71.0 5.53e-01 100.0% 89.3%
2841932 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.78 69.0 5.61e-01 98.5% 57.1%
3526482 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.75 68.0 5.80e-01 100.0% 73.3%
4028705 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.74 66.0 5.37e-01 98.5% 72.5%
3265334 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.72 62.0 5.27e-01 95.5% 84.5%
4982249 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.72 62.0 5.53e-01 100.0% 68.4%
3786990 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.70 60.0 4.89e-01 98.5% 76.2%
3510355 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.69 59.0 4.99e-01 100.0% 77.5%
3742201 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.68 59.0 4.77e-01 100.0% 71.9%
3282063 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.67 59.0 4.84e-01 100.0% 54.4%
5032125 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 60.0 3.97e-01 100.0% 31.9%
3253855 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.66 56.0 5.29e-01 100.0% 77.6%
3482965 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.66 56.0 4.65e-01 100.0% 83.1%
3743975 331.4.1.4 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › Fungal_KA1 0.65 58.0 4.83e-01 100.0% 80.0%
4016644 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.64 57.0 4.41e-01 100.0% 62.4%
3827309 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.63 52.0 4.79e-01 95.5% 83.3%
4770305 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.63 46.0 4.76e-01 86.6% 84.4%
3351393 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 42.0 3.76e-01 70.1% 98.9%
4797813 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.62 46.0 4.82e-01 86.6% 94.7%
3601539 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.61 50.0 3.55e-01 94.0% 50.0%
4180585 7520.1.1.1 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.61 53.0 4.08e-01 97.0% 56.0%
2490256 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.61 46.0 4.67e-01 85.1% 84.8%
3605420 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.60 49.0 3.41e-01 94.0% 54.0%
5078009 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.60 43.0 2.74e-01 76.1% 43.4%
3755943 223.2.1.37 a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.60 52.0 3.86e-01 100.0% 71.9%
4527322 223.2.1.18 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 0.60 44.0 3.29e-01 80.6% 73.0%
4984607 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 51.0 4.60e-01 98.5% 87.4%
3937193 223.2.1.37 a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.59 50.0 3.80e-01 100.0% 76.6%
1234289 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.58 47.0 3.63e-01 89.6% 52.6%
4946320 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 49.0 3.96e-01 97.0% 86.7%
4136826 7520.1.1.0 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.57 51.0 3.99e-01 98.5% 59.4%
1569520 2003.1.5.151 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.57 47.0 3.23e-01 100.0% 24.7%
3804776 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 48.0 3.15e-01 100.0% 25.8%
5056410 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.55 45.0 2.97e-01 91.0% 47.3%
4383357 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.55 39.0 3.12e-01 74.6% 97.9%
3717169 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.54 40.0 2.88e-01 86.6% 26.0%
5068436 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.54 49.0 3.31e-01 100.0% 40.0%
4116159 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.54 42.0 3.84e-01 94.0% 63.3%
3272081 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 43.0 3.41e-01 100.0% 75.3%
4977257 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.52 42.0 2.95e-01 100.0% 25.6%
4984061 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.51 42.0 2.82e-01 97.0% 40.0%
3604270 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.51 43.0 3.56e-01 100.0% 76.2%
4169235 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 37.0 3.09e-01 77.6% 57.7%
5000965 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.50 40.0 3.76e-01 92.5% 73.3%
5045702 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.50 42.0 2.96e-01 100.0% 27.2%
3684521 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.50 42.0 2.85e-01 98.5% 28.3%