←Back to structures
CAKLQF020000003.1__CAH1076465.1__SAMEA5780031_00799__00127
Bact-VirCAKLQF020000003.1__CAH1076465.1__SAMEA5780031_00799__00127
Identity
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 105-258
Domain cluster:
rep: IMGVR_UViG_3300000172_000310-3300000172-SI34jun09_200mDRAFT_10025738__D4-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02698.24 best | DUF218 | 92.9 | 2.30e-26 | 95.5% | 98.5% |
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ca8A02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 69.0 | 6.97e-01 | 84.4% | 92.3% |
| 1tq8A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 49.0 | 5.32e-01 | 96.8% | 81.1% |
| 2g8lA03 | 3.40.50.10880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF01937, DUF89, domain 3 | 0.69 | 52.0 | 5.30e-01 | 98.7% | 80.1% |
| 1pswA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.68 | 50.0 | 4.83e-01 | 96.1% | 66.5% |
| 3nbkD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 53.0 | 5.26e-01 | 89.0% | 77.9% |
| 1a9xA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 46.0 | 5.25e-01 | 82.5% | 93.1% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 51.0 | 5.36e-01 | 87.7% | 89.1% |
| 2acvA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.66 | 60.0 | 4.90e-01 | 96.8% | 72.4% |
| 1bapA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 56.0 | 5.43e-01 | 89.0% | 100.0% |
| 3p0hB02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 54.0 | 4.35e-01 | 87.7% | 59.2% |
| 4cvhA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.66 | 55.0 | 4.78e-01 | 89.6% | 92.3% |
| 3zf8A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.65 | 54.0 | 4.39e-01 | 88.3% | 92.0% |
| 3ibtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 45.0 | 4.16e-01 | 99.4% | 56.5% |
| 3e3mA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 47.0 | 4.91e-01 | 76.6% | 93.1% |
| 2z3vA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 52.0 | 5.46e-01 | 85.1% | 97.8% |
| 3kcnB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 39.0 | 4.07e-01 | 96.8% | 66.4% |
| 3h5oA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 47.0 | 4.92e-01 | 77.9% | 93.8% |
| 1fuyB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 41.0 | 4.08e-01 | 85.1% | 61.0% |
| 3iprA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.63 | 39.0 | 4.18e-01 | 85.1% | 69.3% |
| 5dteA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 51.0 | 5.12e-01 | 84.4% | 92.8% |
| 2rgyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 47.0 | 4.94e-01 | 76.6% | 98.5% |
| 3brqB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 48.0 | 4.95e-01 | 90.9% | 85.4% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 47.0 | 4.51e-01 | 77.3% | 78.6% |
| 2vk2A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 5.23e-01 | 90.9% | 100.0% |
| 4wutA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 52.0 | 5.28e-01 | 88.3% | 100.0% |
| 7zveA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 57.0 | 5.30e-01 | 98.7% | 81.6% |
| 2eg3A02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.63 | 37.0 | 4.24e-01 | 86.4% | 79.3% |
| 4rr9A01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.62 | 40.0 | 4.32e-01 | 86.4% | 74.6% |
| 4rxtA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 50.0 | 5.03e-01 | 87.0% | 100.0% |
| 3kjxA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 46.0 | 4.78e-01 | 76.6% | 94.3% |
| 2derB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 50.0 | 4.59e-01 | 87.0% | 85.2% |
| 5ix8A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 52.0 | 5.21e-01 | 90.9% | 99.4% |
| 2o20A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 46.0 | 4.82e-01 | 77.3% | 94.9% |
| 3bblA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 47.0 | 4.87e-01 | 90.9% | 86.7% |
| 2pueA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 46.0 | 4.74e-01 | 90.3% | 83.0% |
| 2yhaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 39.0 | 4.12e-01 | 85.7% | 71.2% |
| 1tjyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 51.0 | 5.18e-01 | 90.3% | 100.0% |
| 3d8uB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 48.0 | 4.90e-01 | 83.1% | 92.7% |
| 3ksmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 49.0 | 5.05e-01 | 87.0% | 98.7% |
| 3gv0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 44.0 | 4.69e-01 | 75.3% | 99.2% |
| 1o97C00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 54.0 | 4.61e-01 | 98.1% | 85.7% |
| 1tvcA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.60 | 47.0 | 4.93e-01 | 93.5% | 90.8% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 39.0 | 4.24e-01 | 86.4% | 78.9% |
| 5bq3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 5.04e-01 | 90.3% | 99.4% |
| 6i3mG01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 50.0 | 4.16e-01 | 91.6% | 97.4% |
| 3d02A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 49.0 | 4.97e-01 | 89.6% | 99.3% |
| 3g85A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 44.0 | 4.81e-01 | 87.0% | 95.2% |
| 3hcwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 45.0 | 4.66e-01 | 86.4% | 86.0% |
| 1y89A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 54.0 | 4.65e-01 | 100.0% | 78.5% |
| 7zvjA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 49.0 | 4.19e-01 | 89.6% | 95.2% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 52.0 | 4.64e-01 | 98.7% | 68.7% |
| 1pbtA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 53.0 | 4.74e-01 | 99.4% | 78.1% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 48.0 | 4.44e-01 | 89.0% | 75.3% |
| 1iv0A00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.57 | 34.0 | 4.14e-01 | 85.1% | 93.9% |
| 3h5tA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 47.0 | 4.72e-01 | 90.3% | 89.2% |
| 6tmvB01 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.56 | 39.0 | 3.86e-01 | 83.1% | 67.5% |
| 3oy2A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 51.0 | 4.43e-01 | 100.0% | 84.1% |
| 2o3jB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 4.22e-01 | 98.7% | 66.2% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 50.0 | 4.58e-01 | 100.0% | 86.5% |
| 3islA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.55 | 45.0 | 3.90e-01 | 87.7% | 81.3% |
| 1lucA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.55 | 44.0 | 3.47e-01 | 85.7% | 92.3% |
| 1bho100 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 49.0 | 4.62e-01 | 98.7% | 80.4% |
| 4g4sP00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.54 | 45.0 | 4.19e-01 | 87.7% | 76.3% |
| 5dn6G02 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.54 | 47.0 | 4.33e-01 | 92.9% | 75.3% |
| 5ze7A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 46.0 | 4.63e-01 | 100.0% | 92.3% |
| 5enzA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 48.0 | 4.73e-01 | 100.0% | 93.2% |
| 3ct6A00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.53 | 41.0 | 4.38e-01 | 94.8% | 96.2% |
| 1imjA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 4.05e-01 | 98.7% | 68.3% |
| 5by7A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 40.0 | 4.17e-01 | 81.8% | 96.6% |
| 1ekeA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 42.0 | 4.06e-01 | 85.1% | 83.0% |
| 2x0dA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 46.0 | 4.50e-01 | 100.0% | 88.2% |
| 2bfwA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 47.0 | 4.38e-01 | 99.4% | 86.2% |
| 4l9aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 3.85e-01 | 100.0% | 67.8% |
| 4o1eB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.51 | 41.0 | 3.42e-01 | 85.1% | 86.1% |
| 1szpB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 4.03e-01 | 96.1% | 71.6% |
| 3c48B02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 45.0 | 4.31e-01 | 100.0% | 85.2% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033573 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.94 | 91.0 | 7.66e-01 | 100.0% | 66.1% |
| 3278238 | 2005.1.1.45 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF218 | 0.94 | 77.0 | 7.80e-01 | 85.7% | 85.3% |
| 3507232 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.92 | 89.0 | 8.24e-01 | 99.4% | 83.8% |
| 3590641 | 2005.1.1.45 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF218 | 0.92 | 86.0 | 8.27e-01 | 96.1% | 88.8% |
| 3286171 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.92 | 89.0 | 8.08e-01 | 100.0% | 79.0% |
| 3979709 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.91 | 87.0 | 8.02e-01 | 100.0% | 80.5% |
| 3302168 | 2005.2.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF | 0.90 | 86.0 | 7.22e-01 | 100.0% | 77.1% |
| 3282791 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.90 | 84.0 | 7.98e-01 | 100.0% | 85.7% |
| 4273678 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.89 | 87.0 | 7.12e-01 | 100.0% | 68.0% |
| 3963923 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.89 | 85.0 | 8.12e-01 | 100.0% | 88.4% |
| 3280711 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.89 | 82.0 | 7.56e-01 | 100.0% | 77.9% |
| 3967473 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.88 | 85.0 | 7.60e-01 | 100.0% | 84.5% |
| 3783863 | 2005.2.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF | 0.87 | 83.0 | 6.87e-01 | 100.0% | 75.7% |
| 3252192 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.87 | 84.0 | 7.89e-01 | 100.0% | 90.6% |
| 3286102 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.87 | 81.0 | 7.48e-01 | 100.0% | 79.5% |
| 3978808 | 2005.1.1.45 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF218 | 0.85 | 78.0 | 7.56e-01 | 100.0% | 87.6% |
| 4009535 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.85 | 78.0 | 7.22e-01 | 100.0% | 78.4% |
| 4579452 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.85 | 81.0 | 7.17e-01 | 100.0% | 75.2% |
| 3942559 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.84 | 80.0 | 6.50e-01 | 100.0% | 72.8% |
| 3586946 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.82 | 78.0 | 6.49e-01 | 100.0% | 76.0% |
| 3452376 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.72 | 58.0 | 6.00e-01 | 85.7% | 88.9% |
| 5040846 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 56.0 | 5.92e-01 | 86.4% | 94.1% |
| 4218545 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.69 | 58.0 | 4.46e-01 | 89.0% | 72.7% |
| 4997389 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.68 | 63.0 | 4.53e-01 | 100.0% | 63.9% |
| 4166454 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.68 | 54.0 | 5.44e-01 | 89.0% | 82.6% |
| 4280853 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.68 | 54.0 | 5.32e-01 | 90.9% | 78.0% |
| 5027612 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.68 | 47.0 | 5.26e-01 | 84.4% | 93.9% |
| 3988303 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.67 | 39.0 | 4.18e-01 | 83.8% | 65.4% |
| 3587226 | 2004.1.1.422 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, RsgA_GTPase | 0.67 | 57.0 | 5.47e-01 | 92.2% | 88.9% |
| 4961874 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 53.0 | 5.74e-01 | 86.4% | 98.5% |
| 4980564 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.67 | 53.0 | 5.50e-01 | 88.3% | 89.7% |
| 4000045 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.67 | 50.0 | 4.70e-01 | 96.1% | 63.7% |
| 4928434 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.66 | 50.0 | 4.84e-01 | 96.1% | 69.5% |
| 4161621 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.66 | 52.0 | 5.27e-01 | 90.9% | 84.7% |
| 4950705 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.66 | 51.0 | 5.45e-01 | 85.1% | 95.4% |
| 4946146 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.66 | 52.0 | 5.51e-01 | 87.7% | 94.1% |
| 4984967 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.65 | 51.0 | 5.35e-01 | 89.0% | 90.7% |
| 4259848 | 7516.1.1.5 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD | 0.65 | 55.0 | 4.77e-01 | 89.6% | 92.6% |
| 5045615 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.65 | 49.0 | 4.64e-01 | 96.1% | 65.9% |
| 3518537 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.64 | 47.0 | 5.07e-01 | 75.3% | 100.0% |
| 5059444 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.64 | 52.0 | 5.32e-01 | 89.0% | 88.0% |
| 372967 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.64 | 40.0 | 4.16e-01 | 85.1% | 67.9% |
| 3969971 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.63 | 48.0 | 4.94e-01 | 79.9% | 94.6% |
| 1253054 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.63 | 48.0 | 5.10e-01 | 79.2% | 100.0% |
| 3786463 | 7512.1.1.53 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › ALG11_N | 0.63 | 58.0 | 4.32e-01 | 99.4% | 50.0% |
| 4971828 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.63 | 53.0 | 5.54e-01 | 98.7% | 98.6% |
| 3974852 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.63 | 47.0 | 5.10e-01 | 88.3% | 93.8% |
| 3521346 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.62 | 48.0 | 4.52e-01 | 79.9% | 77.3% |
| 1588030 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.61 | 47.0 | 5.00e-01 | 90.9% | 91.9% |
| 1575717 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.61 | 49.0 | 5.13e-01 | 85.1% | 100.0% |
| 2392259 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.61 | 46.0 | 4.92e-01 | 90.9% | 93.2% |
| 3976454 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.61 | 49.0 | 5.02e-01 | 84.4% | 93.1% |
| 5005967 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.61 | 51.0 | 5.31e-01 | 98.7% | 96.6% |
| 3797861 | 7516.1.1.37 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN | 0.60 | 55.0 | 4.38e-01 | 100.0% | 89.4% |
| 4005120 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.60 | 50.0 | 4.95e-01 | 89.0% | 99.4% |
| 3172133 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.60 | 50.0 | 4.92e-01 | 89.0% | 95.2% |
| 4074764 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.60 | 36.0 | 3.98e-01 | 98.7% | 72.8% |
| 5054755 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.59 | 54.0 | 4.88e-01 | 98.7% | 73.7% |
| 3682165 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.59 | 46.0 | 4.42e-01 | 88.3% | 70.6% |
| 3588043 | 2010.1.1.0 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain | 0.59 | 41.0 | 4.47e-01 | 70.1% | 98.4% |
| 1525091 | 2007.1.2.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_1 | 0.59 | 44.0 | 4.86e-01 | 87.7% | 100.0% |
| 5000117 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.59 | 53.0 | 4.86e-01 | 99.4% | 80.5% |
| 4108976 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.59 | 37.0 | 3.77e-01 | 87.0% | 62.6% |
| 3173454 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.58 | 53.0 | 4.48e-01 | 100.0% | 87.5% |
| 3665075 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.57 | 44.0 | 4.53e-01 | 80.5% | 87.6% |
| 3245843 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.57 | 46.0 | 4.12e-01 | 92.2% | 60.5% |
| 3363215 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.57 | 47.0 | 4.52e-01 | 89.0% | 77.7% |
| 5062531 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.56 | 51.0 | 4.71e-01 | 100.0% | 87.0% |
| 4957804 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.56 | 51.0 | 4.73e-01 | 99.4% | 87.7% |
| 5039591 | 7512.1.1.13 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PS_pyruv_trans | 0.56 | 51.0 | 4.58e-01 | 100.0% | 81.9% |
| 4385286 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.56 | 45.0 | 4.23e-01 | 87.7% | 70.3% |
| 3741558 | 4969.1.1.5 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › DUF1744 | 0.55 | 45.0 | 4.27e-01 | 88.3% | 73.0% |
| 3243551 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.55 | 50.0 | 4.61e-01 | 98.7% | 84.0% |
| 3784599 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.55 | 45.0 | 3.55e-01 | 87.7% | 41.5% |
| 4974956 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.55 | 50.0 | 4.60e-01 | 100.0% | 87.7% |
| 4996457 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 50.0 | 4.49e-01 | 100.0% | 84.3% |
| 4974681 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 49.0 | 4.66e-01 | 100.0% | 92.4% |
| 3473635 | 7512.1.1.12 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_tran_28_C | 0.54 | 48.0 | 4.37e-01 | 99.4% | 94.3% |
| 5003854 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 33.0 | 3.82e-01 | 85.1% | 84.3% |
| 5081939 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 48.0 | 4.60e-01 | 98.7% | 91.4% |
| 3601038 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 4.04e-01 | 96.8% | 71.6% |
| 4346434 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.51 | 38.0 | 4.05e-01 | 79.2% | 92.0% |
D2
medium
residues 5-96
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 48.0 | 3.39e-01 | 71.7% | 47.6% |
| 4y9jA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.68 | 47.0 | 3.98e-01 | 70.7% | 45.6% |
| 4wpcA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 47.0 | 3.28e-01 | 70.7% | 37.1% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 44.0 | 3.40e-01 | 87.0% | 31.1% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.67 | 46.0 | 3.46e-01 | 70.7% | 30.0% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 45.0 | 4.04e-01 | 70.7% | 50.8% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 45.0 | 4.47e-01 | 70.7% | 84.8% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.66 | 44.0 | 3.99e-01 | 70.7% | 50.0% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.65 | 45.0 | 3.08e-01 | 70.7% | 20.7% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 45.0 | 3.26e-01 | 71.7% | 49.2% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.65 | 45.0 | 3.76e-01 | 71.7% | 98.2% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.65 | 44.0 | 4.49e-01 | 78.3% | 71.1% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 45.0 | 3.58e-01 | 70.7% | 59.0% |
| 5fmnA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.65 | 44.0 | 4.55e-01 | 82.6% | 74.4% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.64 | 55.0 | 3.61e-01 | 96.7% | 65.1% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 42.0 | 4.15e-01 | 70.7% | 64.3% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.62 | 42.0 | 4.33e-01 | 70.7% | 74.1% |
| 2m6bA00 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.62 | 42.0 | 3.64e-01 | 70.7% | 52.0% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.61 | 54.0 | 4.00e-01 | 100.0% | 78.5% |
| 1jgcA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 53.0 | 4.41e-01 | 97.8% | 83.7% |
| 1gqeA01 | 1.20.58.410 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor | 0.60 | 47.0 | 4.48e-01 | 87.0% | 92.9% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 43.0 | 3.83e-01 | 97.8% | 53.4% |
| 5tpmB00 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.59 | 41.0 | 3.52e-01 | 87.0% | 46.8% |
| 3i9wA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 51.0 | 3.73e-01 | 100.0% | 88.9% |
| 3dytA02 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 52.0 | 4.10e-01 | 100.0% | 94.2% |
| 3ezuA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 42.0 | 3.40e-01 | 76.1% | 59.3% |
| 3ezhA00 | 1.20.120.960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase NarX, sensor domain | 0.58 | 45.0 | 4.27e-01 | 100.0% | 70.2% |
| 2qr4A01 | 1.20.140.70 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain | 0.57 | 39.0 | 3.35e-01 | 70.7% | 98.7% |
| 2xq9A02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.57 | 43.0 | 3.97e-01 | 81.5% | 67.8% |
| 5xtck00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 45.0 | 4.42e-01 | 88.0% | 78.4% |
| 1exaA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 49.0 | 3.71e-01 | 100.0% | 91.1% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 48.0 | 4.12e-01 | 100.0% | 90.6% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.55 | 48.0 | 4.18e-01 | 100.0% | 97.3% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 39.0 | 3.74e-01 | 77.2% | 62.5% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.55 | 47.0 | 3.33e-01 | 100.0% | 44.6% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 48.0 | 3.70e-01 | 98.9% | 85.2% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 49.0 | 4.07e-01 | 100.0% | 98.1% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 47.0 | 4.38e-01 | 98.9% | 75.8% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 47.0 | 3.34e-01 | 94.6% | 63.3% |
| 4dylA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 47.0 | 3.51e-01 | 100.0% | 81.6% |
| 4nswB01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 46.0 | 3.37e-01 | 100.0% | 69.9% |
| 4nphA02 | 1.20.1270.330 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 37.0 | 4.02e-01 | 75.0% | 95.9% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5006401 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 45.0 | 3.87e-01 | 70.7% | 43.4% |
| 3385717 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 46.0 | 3.75e-01 | 70.7% | 39.4% |
| 4031582 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 45.0 | 3.45e-01 | 70.7% | 31.5% |
| 3219759 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 56.0 | 4.99e-01 | 100.0% | 63.7% |
| 4956253 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 53.0 | 5.14e-01 | 95.7% | 75.2% |
| 3976632 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.67 | 47.0 | 3.96e-01 | 71.7% | 90.0% |
| 4109644 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 45.0 | 3.89e-01 | 70.7% | 83.4% |
| 3927012 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 56.0 | 4.89e-01 | 100.0% | 60.7% |
| 3419853 | 192.29.1.19 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon | 0.65 | 56.0 | 4.89e-01 | 100.0% | 62.8% |
| 3676126 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.64 | 43.0 | 3.35e-01 | 70.7% | 31.5% |
| 3288931 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.64 | 44.0 | 2.98e-01 | 70.7% | 21.5% |
| 3228302 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.64 | 56.0 | 5.19e-01 | 98.9% | 78.3% |
| 3801867 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.63 | 44.0 | 3.39e-01 | 72.8% | 75.8% |
| 3580885 | 601.4.1.12 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › DNA_repr_REX1B | 0.62 | 48.0 | 4.09e-01 | 81.5% | 57.9% |
| 3257366 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.62 | 53.0 | 4.06e-01 | 100.0% | 86.0% |
| 3894481 | 277.1.1.5 ↗ | a+b two layers › PX domain › PX domain › PX domain › Vps5 | 0.61 | 54.0 | 3.63e-01 | 100.0% | 47.0% |
| 4373346 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.61 | 48.0 | 3.70e-01 | 85.9% | 86.0% |
| 4528712 | 109.4.1.3083 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29810 | 0.61 | 42.0 | 3.06e-01 | 72.8% | 28.1% |
| 3343524 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.60 | 53.0 | 4.78e-01 | 98.9% | 85.4% |
| 3235297 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 41.0 | 3.31e-01 | 70.7% | 35.7% |
| 3929364 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.60 | 51.0 | 4.66e-01 | 98.9% | 71.2% |
| 3506288 | 4177.1.1.6 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3_WASP_bdg | 0.60 | 53.0 | 4.11e-01 | 100.0% | 83.6% |
| 3729252 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 41.0 | 3.81e-01 | 70.7% | 71.3% |
| 3973905 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.59 | 46.0 | 3.25e-01 | 83.7% | 32.4% |
| 1760269 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.59 | 40.0 | 3.79e-01 | 70.7% | 56.9% |
| 3785458 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.58 | 42.0 | 2.75e-01 | 77.2% | 48.6% |
| 3361162 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.58 | 40.0 | 3.64e-01 | 70.7% | 52.0% |
| 3439339 | 611.8.1.2 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › Rx_N | 0.57 | 49.0 | 4.28e-01 | 94.6% | 75.7% |
| 3999040 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.57 | 46.0 | 3.91e-01 | 92.4% | 71.8% |
| 4507149 | 4177.1.1.9 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Snx8_BAR_dom | 0.57 | 48.0 | 3.75e-01 | 96.7% | 91.4% |
| 3720488 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.55 | 45.0 | 4.02e-01 | 88.0% | 68.5% |
| 3618558 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.55 | 49.0 | 3.79e-01 | 100.0% | 83.3% |
| 3221718 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.55 | 48.0 | 3.85e-01 | 100.0% | 88.9% |
| 5006970 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.55 | 41.0 | 3.64e-01 | 81.5% | 75.0% |
| 3489372 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 49.0 | 3.64e-01 | 100.0% | 73.2% |
| 3633320 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.53 | 45.0 | 3.36e-01 | 98.9% | 81.9% |
| 3518412 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.53 | 46.0 | 3.48e-01 | 95.7% | 82.7% |
| 3177702 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.53 | 47.0 | 3.53e-01 | 100.0% | 77.0% |
| 3783036 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.52 | 46.0 | 3.41e-01 | 100.0% | 77.3% |
| 3385577 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.52 | 43.0 | 3.94e-01 | 97.8% | 67.7% |
| 3800984 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.50 | 43.0 | 3.35e-01 | 96.7% | 79.5% |