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CAKLQF020000003.1__CAH1076617.1__SAMEA5780031_00870__00197
Bact-VirCAKLQF020000003.1__CAH1076617.1__SAMEA5780031_00870__00197
Identity
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-84
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01016.25 best | Ribosomal_L27 | 91.9 | 2.90e-26 | 96.8% | 74.7% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v19000 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.98 | 95.0 | 7.44e-01 | 100.0% | 73.7% |
| 1v8qA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.98 | 93.0 | 9.12e-01 | 100.0% | 93.9% |
| 3m7nA01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.90 | 66.0 | 7.26e-01 | 90.5% | 92.3% |
| 2nn6H01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.87 | 62.0 | 6.56e-01 | 88.9% | 85.5% |
| 1ynjD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.82 | 54.0 | 5.86e-01 | 100.0% | 81.1% |
| 4ifdI01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 74.0 | 6.54e-01 | 100.0% | 95.3% |
| 2nn6I01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.79 | 60.0 | 6.47e-01 | 87.3% | 100.0% |
| 2nn6G01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.74 | 65.0 | 6.29e-01 | 100.0% | 87.3% |
| 4ifdG01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.72 | 59.0 | 6.07e-01 | 90.5% | 95.1% |
| 4tkoB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.70 | 54.0 | 5.38e-01 | 100.0% | 78.8% |
| 3fppA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 54.0 | 5.17e-01 | 100.0% | 78.4% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 55.0 | 4.68e-01 | 100.0% | 93.6% |
| 2dn8A01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.63 | 52.0 | 5.02e-01 | 100.0% | 79.2% |
| 4fe9A03 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 55.0 | 4.63e-01 | 100.0% | 95.5% |
| 5cyxA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.61 | 53.0 | 4.31e-01 | 96.8% | 87.3% |
| 7cymA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.60 | 49.0 | 4.45e-01 | 92.1% | 98.9% |
| 3cdxD00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.59 | 51.0 | 3.20e-01 | 100.0% | 18.6% |
| 7y6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 3.90e-01 | 98.4% | 91.8% |
| 8ediA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 3.96e-01 | 100.0% | 92.3% |
| 1jmxA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.55e-01 | 98.4% | 91.1% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.51 | 42.0 | 3.76e-01 | 90.5% | 92.1% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2138055 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 1.00 | 97.0 | 8.56e-01 | 100.0% | 75.0% |
| 3264421 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 1.00 | 97.0 | 8.11e-01 | 100.0% | 71.6% |
| 3398073 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.99 | 95.0 | 7.99e-01 | 100.0% | 87.4% |
| 2719914 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.98 | 95.0 | 7.41e-01 | 100.0% | 72.4% |
| 4213490 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.98 | 93.0 | 8.43e-01 | 100.0% | 77.5% |
| 3479881 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.98 | 94.0 | 7.43e-01 | 100.0% | 71.7% |
| 2452724 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.97 | 92.0 | 8.12e-01 | 100.0% | 72.9% |
| 2471263 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.97 | 93.0 | 7.31e-01 | 100.0% | 73.0% |
| 3503453 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.97 | 93.0 | 7.59e-01 | 100.0% | 82.7% |
| 3993955 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.97 | 93.0 | 7.69e-01 | 100.0% | 87.0% |
| 3697339 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.97 | 93.0 | 7.41e-01 | 100.0% | 59.1% |
| 3620850 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.97 | 92.0 | 7.28e-01 | 100.0% | 73.7% |
| 4887709 | 325.1.8.7 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27, Ribosomal_L27_C | 0.96 | 92.0 | 7.65e-01 | 100.0% | 64.6% |
| 5030051 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.96 | 78.0 | 8.07e-01 | 100.0% | 90.0% |
| 4028533 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.95 | 91.0 | 7.06e-01 | 100.0% | 64.2% |
| 3658874 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.95 | 90.0 | 7.02e-01 | 100.0% | 64.2% |
| 4233596 | 325.1.8.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N_2 | 0.93 | 75.0 | 8.00e-01 | 98.4% | 96.4% |
| 3710828 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.93 | 87.0 | 6.50e-01 | 100.0% | 54.3% |
| 5024283 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.92 | 72.0 | 7.75e-01 | 93.7% | 94.5% |
| 4946967 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.90 | 71.0 | 7.57e-01 | 93.7% | 94.5% |
| 5029257 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.90 | 65.0 | 7.33e-01 | 85.7% | 96.0% |
| 4957073 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.89 | 66.0 | 7.08e-01 | 92.1% | 89.1% |
| 3471987 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.88 | 69.0 | 7.41e-01 | 87.3% | 94.5% |
| 4028092 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.88 | 71.0 | 7.58e-01 | 92.1% | 98.2% |
| 3516458 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.87 | 76.0 | 7.80e-01 | 95.2% | 96.7% |
| 4929507 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.87 | 67.0 | 7.21e-01 | 90.5% | 92.7% |
| 3471930 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.87 | 76.0 | 7.80e-01 | 100.0% | 96.7% |
| 3790843 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.87 | 74.0 | 7.65e-01 | 90.5% | 95.0% |
| 5067765 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.87 | 68.0 | 7.31e-01 | 93.7% | 94.5% |
| 3468773 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.86 | 73.0 | 7.48e-01 | 90.5% | 93.3% |
| 3934824 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.86 | 72.0 | 7.41e-01 | 88.9% | 98.3% |
| 5053182 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.86 | 69.0 | 7.37e-01 | 95.2% | 98.2% |
| 3502131 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.85 | 66.0 | 7.02e-01 | 93.7% | 92.7% |
| 3936518 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.85 | 62.0 | 6.84e-01 | 90.5% | 96.0% |
| 3323282 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.85 | 73.0 | 7.52e-01 | 92.1% | 100.0% |
| 3908713 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.85 | 70.0 | 7.15e-01 | 93.7% | 91.7% |
| 3232864 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.83 | 66.0 | 7.07e-01 | 85.7% | 100.0% |
| 3683853 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.81 | 64.0 | 6.40e-01 | 92.1% | 81.5% |
| 3259318 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.80 | 70.0 | 6.54e-01 | 93.7% | 97.3% |
| 3866115 | 325.1.8.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › RRP40_N_mamm | 0.76 | 69.0 | 6.10e-01 | 100.0% | 95.6% |
| 3725141 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.74 | 63.0 | 6.44e-01 | 92.1% | 95.0% |
| 4876624 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.74 | 59.0 | 6.12e-01 | 96.8% | 91.5% |
| 5000803 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.71 | 55.0 | 5.87e-01 | 92.1% | 96.4% |
| 1866329 | 325.1.8.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Rrp40_N | 0.71 | 60.0 | 6.09e-01 | 98.4% | 93.7% |
| 3994706 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.70 | 60.0 | 6.01e-01 | 93.7% | 92.3% |
| 3973281 | 325.1.7.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl | 0.69 | 57.0 | 5.50e-01 | 100.0% | 80.0% |
| 1139841 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.66 | 51.0 | 4.99e-01 | 100.0% | 75.4% |
| 4676584 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.66 | 54.0 | 5.44e-01 | 98.4% | 92.3% |
| 4494179 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.63 | 47.0 | 5.00e-01 | 92.1% | 92.7% |
| 224023 | 3597.1.1.1 ↗ | beta sandwiches › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › SusF_SusE | 0.63 | 55.0 | 4.63e-01 | 100.0% | 95.4% |
| 5074460 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 43.0 | 3.69e-01 | 93.7% | 81.0% |
| 4010008 | 2.25.1.1 ↗ | beta barrels › OB-fold › OB domain in IgaA › OB domain in IgaA › IgaA | 0.52 | 42.0 | 3.74e-01 | 100.0% | 93.3% |