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CAKLQF020000004.1__CAH1076678.1__SAMEA5780031_00903__00001

Bact-Vir

CAKLQF020000004.1__CAH1076678.1__SAMEA5780031_00903__00001

Identity

Kingdom:
phage

Quality

83.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-189
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.78 74.0 7.08e-01 100.0% 92.7%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.63 58.0 4.72e-01 100.0% 94.1%
4kc7A02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.62 37.0 4.52e-01 98.1% 93.9%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.57 52.0 4.20e-01 100.0% 87.3%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.56 50.0 4.27e-01 100.0% 93.3%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.56 51.0 4.37e-01 100.0% 98.4%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.56 50.0 3.67e-01 99.4% 92.8%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.55 41.0 4.43e-01 100.0% 92.5%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 44.0 3.37e-01 84.3% 97.3%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.54 41.0 4.00e-01 100.0% 72.9%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.53 42.0 4.29e-01 98.7% 85.7%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 35.0 3.94e-01 100.0% 85.1%
3hzpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 33.0 3.69e-01 98.1% 78.7%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 48.0 4.58e-01 100.0% 94.5%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 34.0 3.60e-01 96.9% 73.9%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5074866 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.78 75.0 6.96e-01 100.0% 93.7%
4014909 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.78 74.0 6.67e-01 100.0% 85.1%
3730428 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.78 73.0 6.59e-01 100.0% 84.3%
4349531 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.77 73.0 6.59e-01 100.0% 94.3%
5065385 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.77 71.0 7.03e-01 100.0% 92.7%
5022112 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.77 73.0 6.83e-01 100.0% 98.9%
4128674 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.77 73.0 6.50e-01 100.0% 85.6%
3734952 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.77 73.0 6.85e-01 100.0% 86.5%
5061051 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.76 72.0 6.80e-01 100.0% 85.4%
5071561 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.75 69.0 6.75e-01 100.0% 90.0%
5043414 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.75 62.0 6.67e-01 97.5% 100.0%
5037122 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.75 71.0 6.55e-01 100.0% 86.7%
4960625 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.75 70.0 6.64e-01 99.4% 91.4%
3970394 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.75 58.0 6.45e-01 99.4% 99.2%
4944579 4252.1.1.15 beta barrels › AttH-like › AttH-like › AttH-like › PF30558 0.75 71.0 6.59e-01 100.0% 92.8%
3973592 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.75 71.0 6.56e-01 100.0% 86.6%
4959177 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.74 71.0 6.87e-01 100.0% 94.9%
5052650 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.74 71.0 6.61e-01 100.0% 95.3%
3395610 4252.1.1.15 beta barrels › AttH-like › AttH-like › AttH-like › PF30558 0.74 70.0 6.35e-01 100.0% 94.1%
3265154 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.74 58.0 6.43e-01 99.4% 100.0%
3726881 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.74 71.0 6.73e-01 100.0% 92.2%
4465334 4252.1.1.7 beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.73 69.0 6.03e-01 100.0% 92.6%
3714739 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.73 57.0 6.12e-01 98.7% 92.1%
5032792 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.69 56.0 6.00e-01 99.4% 97.9%
3268549 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.67 58.0 6.12e-01 100.0% 100.0%
5033919 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.66 56.0 5.87e-01 100.0% 98.6%
5022113 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.65 55.0 5.73e-01 100.0% 97.2%
4471350 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.65 56.0 5.85e-01 98.7% 98.6%
4351444 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.65 56.0 5.79e-01 100.0% 97.3%
5050662 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.64 57.0 5.74e-01 100.0% 92.6%
4014908 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.64 56.0 5.65e-01 100.0% 92.5%
4182578 4252.1.1.5 beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.62 58.0 5.51e-01 100.0% 89.3%
2756903 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.60 55.0 5.56e-01 100.0% 98.8%
4511718 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.59 54.0 5.36e-01 100.0% 98.2%
5054891 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.59 54.0 5.17e-01 99.4% 92.4%
5035197 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.58 53.0 5.24e-01 97.5% 98.2%
2629710 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.58 52.0 5.23e-01 100.0% 97.6%
4669372 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 52.0 4.22e-01 100.0% 86.1%
3706756 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.56 43.0 3.59e-01 80.5% 81.1%
3071075 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.56 48.0 3.81e-01 91.8% 90.4%
4417262 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.55 51.0 5.07e-01 100.0% 98.2%
4195943 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.55 46.0 3.67e-01 90.6% 87.2%
1952891 9.1.1.9 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeT 0.54 42.0 4.50e-01 97.5% 97.1%
4039744 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.53 48.0 3.82e-01 98.7% 92.6%
3388060 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.53 49.0 4.63e-01 99.4% 100.0%
4031750 274.1.1.25 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.52 31.0 3.79e-01 95.6% 92.9%
3429047 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.52 47.0 3.84e-01 100.0% 99.3%
3837948 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.52 47.0 4.45e-01 100.0% 92.6%
4188109 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.51 46.0 3.60e-01 95.6% 69.1%
3736744 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 35.0 3.68e-01 98.7% 77.9%
1558583 5084.5.4.2 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › CymA 0.51 47.0 3.72e-01 100.0% 93.3%
4970968 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.50 29.0 3.35e-01 93.1% 77.9%
D2 high residues 196-331
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20375.4 best DUF6670 56.3 4.10e-15 99.3% 44.6%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ichA02 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.81 72.0 7.40e-01 97.8% 97.7%
3cmbA00 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.69 63.0 4.95e-01 96.3% 84.9%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.61 53.0 5.19e-01 96.3% 100.0%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.60 49.0 5.00e-01 96.3% 89.5%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.58 49.0 3.70e-01 91.2% 97.9%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.58 52.0 4.34e-01 97.8% 77.9%
1gkaB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 45.0 4.18e-01 93.4% 64.9%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.57 41.0 3.48e-01 99.3% 45.1%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 4.29e-01 94.9% 64.8%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.56 48.0 3.95e-01 96.3% 98.1%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.56 35.0 3.70e-01 91.2% 69.1%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.56 49.0 4.01e-01 96.3% 98.0%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.54 48.0 3.85e-01 98.5% 87.8%
1n7oA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.54 30.0 3.70e-01 74.3% 85.9%
4mjdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 35.0 3.74e-01 89.7% 80.5%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 33.0 3.85e-01 80.1% 90.5%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.52 45.0 3.23e-01 94.1% 45.0%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.52 46.0 3.81e-01 98.5% 97.6%
4b0bB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 40.0 3.70e-01 80.9% 89.3%
1af6A00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.51 43.0 3.07e-01 89.7% 94.1%
2w16A03 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 38.0 2.50e-01 76.5% 48.4%
4bd4A00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.51 39.0 4.26e-01 94.9% 100.0%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 39.0 3.90e-01 97.8% 78.5%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952686 4252.1.1.1 beta barrels › AttH-like › AttH-like › AttH-like › CrtC 0.82 73.0 7.48e-01 97.1% 97.7%
902 4252.1.1.1 beta barrels › AttH-like › AttH-like › AttH-like › CrtC 0.81 72.0 7.37e-01 97.8% 96.9%
4182578 4252.1.1.5 beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.79 73.0 6.48e-01 97.8% 87.7%
2771633 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.79 73.0 7.33e-01 99.3% 97.1%
3959060 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.78 74.0 6.73e-01 100.0% 97.1%
3956719 4252.1.1.14 beta barrels › AttH-like › AttH-like › AttH-like › PF30556 0.78 73.0 6.58e-01 100.0% 93.9%
3730429 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.76 68.0 6.89e-01 97.1% 96.3%
3728892 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.74 68.0 6.00e-01 97.1% 87.4%
3380536 4252.1.1.7 beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.74 69.0 6.65e-01 97.8% 99.3%
4959177 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.72 66.0 6.00e-01 97.1% 90.9%
5071561 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.72 66.0 6.08e-01 97.1% 85.9%
5052650 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.72 65.0 5.76e-01 97.1% 91.6%
4174055 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.63 55.0 5.03e-01 96.3% 100.0%
3385673 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.60 54.0 5.15e-01 100.0% 91.9%
3217507 243.1.1.98 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_C 0.59 34.0 3.69e-01 98.5% 66.7%
3971437 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.58 49.0 4.27e-01 94.1% 80.7%
3611189 222.1.1.10 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.57 40.0 3.75e-01 72.1% 97.6%
3804993 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.56 46.0 3.43e-01 86.8% 91.7%
3838109 5084.9.1.1 beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR 0.53 48.0 4.03e-01 98.5% 96.1%
3290197 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.53 41.0 3.53e-01 81.6% 76.4%
1734925 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.52 45.0 3.23e-01 94.1% 45.0%
3225351 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 37.0 2.89e-01 94.9% 31.4%
3184285 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 43.0 3.83e-01 91.9% 96.6%