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CAKLQF020000004.1__CAH1076702.1__SAMEA5780031_00928__00025

Bact-Vir

CAKLQF020000004.1__CAH1076702.1__SAMEA5780031_00928__00025

Identity

Kingdom:
phage

Quality

97.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-14_88-196
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12710.14 best HAD 77.4 2.70e-21 82.0% 54.5%
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fvvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.93 90.0 8.29e-01 100.0% 95.3%
4ezeB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.86 81.0 5.98e-01 100.0% 66.4%
5is2A03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.86 81.0 6.49e-01 100.0% 86.4%
2b8eB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 68.0 6.77e-01 100.0% 83.9%
4nv0A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 77.0 6.25e-01 100.0% 71.4%
3m1yC01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 78.0 7.23e-01 100.0% 87.2%
3kd3A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.82 77.0 7.07e-01 100.0% 92.9%
3n28A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.82 78.0 7.09e-01 100.0% 82.5%
4ap9A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.78 70.0 6.69e-01 100.0% 83.5%
1l8lA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.77 73.0 6.59e-01 100.0% 84.9%
6xehA01 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.76 43.0 4.50e-01 75.4% 61.3%
2iyeA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.75 67.0 6.06e-01 100.0% 72.6%
3mc1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.75 70.0 6.51e-01 100.0% 98.0%
4fypB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.75 69.0 5.52e-01 97.5% 65.2%
1y8aA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.75 70.0 6.20e-01 100.0% 98.8%
5tqjA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 43.0 4.34e-01 76.2% 56.5%
2fi1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 66.0 6.66e-01 100.0% 95.1%
3kzxA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 68.0 6.56e-01 100.0% 87.7%
2zxeA03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 70.0 6.07e-01 100.0% 96.6%
2hoqA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 69.0 6.24e-01 100.0% 83.5%
3e58B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.73 68.0 6.34e-01 100.0% 89.1%
2ybdA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.73 68.0 6.42e-01 100.0% 87.5%
4navA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 68.0 5.88e-01 100.0% 71.3%
3kbbA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 68.0 6.38e-01 100.0% 89.6%
1nrwA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 68.0 6.22e-01 100.0% 89.0%
1te2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 67.0 6.32e-01 100.0% 88.4%
4ex6A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 68.0 6.23e-01 100.0% 88.2%
3lk7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 49.0 5.63e-01 91.8% 97.7%
3daoB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.71 66.0 6.05e-01 100.0% 86.6%
1qyiA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.71 66.0 5.68e-01 100.0% 90.2%
2g07A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.71 66.0 5.62e-01 100.0% 69.5%
7bsqA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.71 66.0 5.34e-01 100.0% 88.5%
1rlmA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.71 66.0 5.95e-01 100.0% 84.0%
1s2oA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 65.0 5.70e-01 100.0% 86.7%
2fdrA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 64.0 5.89e-01 100.0% 87.7%
3eagA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 50.0 5.60e-01 95.1% 97.8%
2odaA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 63.0 5.38e-01 100.0% 93.8%
3gygC01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 63.0 5.33e-01 100.0% 81.2%
6eqoA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.22e-01 100.0% 89.2%
2gfhA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 62.0 5.68e-01 100.0% 80.6%
7bvaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 49.0 5.49e-01 97.5% 100.0%
7u35A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 48.0 5.38e-01 97.5% 100.0%
1pjqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 51.0 5.36e-01 100.0% 89.3%
3lyuA01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.65 54.0 5.65e-01 92.6% 97.3%
4a0sA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 60.0 5.65e-01 100.0% 93.9%
1qfjA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.65 59.0 5.71e-01 100.0% 95.6%
3s6gY01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.64 58.0 4.55e-01 100.0% 88.9%
3tnjA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 56.0 5.68e-01 98.4% 95.9%
2ehdA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 59.0 4.88e-01 100.0% 96.1%
5jc8C00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 58.0 4.53e-01 100.0% 92.1%
5tt0B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 59.0 4.57e-01 100.0% 88.4%
5z2xA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 58.0 4.14e-01 100.0% 56.1%
3v8bC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 58.0 4.49e-01 100.0% 94.9%
4z0tA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 58.0 4.55e-01 100.0% 91.0%
2ielA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 55.0 5.42e-01 97.5% 100.0%
5if3B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 57.0 4.76e-01 100.0% 82.3%
3l9wA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 54.0 4.87e-01 100.0% 69.9%
3fg9C01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 56.0 5.32e-01 97.5% 100.0%
8inpA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 56.0 4.50e-01 100.0% 87.1%
3fwzA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 53.0 5.14e-01 100.0% 82.1%
4yacA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 56.0 4.55e-01 100.0% 77.3%
2e7zA03 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.61 56.0 4.70e-01 100.0% 80.0%
3fdxA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 55.0 5.44e-01 98.4% 100.0%
5f5nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 56.0 4.19e-01 100.0% 68.5%
2f8lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 55.0 4.36e-01 100.0% 70.5%
1kjnA00 3.40.50.10160 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like 0.60 55.0 5.08e-01 100.0% 83.6%
4obxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 55.0 4.35e-01 100.0% 81.7%
4xglA01 3.40.50.11980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 49.0 4.67e-01 100.0% 76.4%
3tixB03 3.40.50.11490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 53.0 4.95e-01 100.0% 94.6%
5u4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 53.0 3.94e-01 100.0% 56.9%
3idfA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 52.0 5.05e-01 98.4% 99.3%
3iv6A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 54.0 4.57e-01 100.0% 75.5%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 52.0 4.32e-01 100.0% 82.7%
2pl1A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 41.0 4.16e-01 74.6% 100.0%
2i0fA00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.57 41.0 3.90e-01 75.4% 91.2%
7mdhA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 52.0 4.79e-01 100.0% 97.4%
5gizA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.56 46.0 4.52e-01 100.0% 84.5%
3razA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 45.0 4.40e-01 100.0% 80.7%
8a0cA01 3.40.50.11820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CDP-glycerol glycerophosphotransferase, N-terminal domain 0.55 50.0 4.53e-01 100.0% 94.5%
4id9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.10e-01 99.2% 73.9%
4rckA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.55 39.0 3.35e-01 75.4% 47.1%
2vz9A05 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.58e-01 93.4% 71.3%
2r8rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 45.0 3.83e-01 100.0% 99.0%
4hujA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 46.0 3.91e-01 100.0% 73.5%
1dz3A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 39.0 3.91e-01 100.0% 81.3%
1vhcF00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 46.0 3.80e-01 100.0% 74.6%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3970051 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.96 91.0 7.51e-01 97.5% 98.5%
3386965 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.96 93.0 7.72e-01 100.0% 96.3%
4113962 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.93 89.0 7.20e-01 98.4% 93.7%
None 0.92 88.0 7.24e-01 100.0% 97.0%
3958776 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.92 88.0 6.79e-01 100.0% 88.7%
3285985 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.91 88.0 7.08e-01 100.0% 98.6%
3955141 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.91 88.0 6.96e-01 100.0% 87.7%
5040283 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.90 86.0 6.64e-01 100.0% 96.7%
3945408 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.89 84.0 6.75e-01 98.4% 97.7%
3947862 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.86 82.0 6.67e-01 98.4% 99.5%
5012850 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.86 82.0 6.70e-01 100.0% 92.2%
3976470 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.86 82.0 6.58e-01 100.0% 89.3%
1833671 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.85 80.0 6.57e-01 100.0% 92.2%
4997385 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.85 80.0 6.41e-01 100.0% 90.9%
5061017 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.84 79.0 6.47e-01 100.0% 92.4%
4983541 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.84 79.0 6.32e-01 100.0% 89.7%
4948663 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.84 79.0 6.45e-01 100.0% 90.5%
4940656 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.84 79.0 6.37e-01 100.0% 92.6%
5064285 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.83 79.0 6.46e-01 100.0% 91.2%
5034264 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.83 79.0 6.40e-01 100.0% 94.3%
5064798 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.83 78.0 6.33e-01 100.0% 90.2%
4956152 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.83 78.0 6.37e-01 100.0% 91.9%
4927543 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.83 78.0 6.28e-01 100.0% 86.3%
5079641 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.80 75.0 6.03e-01 100.0% 85.3%
5057892 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.80 75.0 6.03e-01 100.0% 92.4%
5054763 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.80 74.0 6.28e-01 98.4% 94.2%
3386531 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.79 68.0 5.80e-01 100.0% 59.5%
3972872 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.79 74.0 6.13e-01 100.0% 92.0%
5070396 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.78 73.0 5.69e-01 100.0% 79.2%
4117789 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.78 69.0 5.61e-01 100.0% 53.0%
5054654 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.78 68.0 6.50e-01 93.4% 97.9%
3688077 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.78 73.0 5.52e-01 100.0% 85.2%
5040586 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.78 72.0 5.99e-01 100.0% 92.6%
4943941 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.77 68.0 5.78e-01 100.0% 61.1%
3839871 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.77 68.0 5.62e-01 100.0% 56.5%
4047441 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.77 68.0 6.11e-01 100.0% 70.6%
3171720 2006.1.1.28 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › APP1_cat 0.76 70.0 5.65e-01 100.0% 91.1%
4984747 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.75 66.0 5.70e-01 93.4% 81.5%
3176068 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.74 70.0 5.89e-01 100.0% 66.3%
4049776 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.74 70.0 5.83e-01 100.0% 89.7%
3811750 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.74 69.0 5.44e-01 100.0% 87.2%
3576081 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.73 69.0 4.25e-01 100.0% 31.8%
4201251 2006.1.1.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.73 68.0 5.12e-01 100.0% 96.0%
3192575 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.73 68.0 5.51e-01 100.0% 72.3%
3433736 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.73 69.0 5.87e-01 100.0% 75.1%
3486568 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.73 69.0 5.40e-01 100.0% 88.9%
3596739 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.72 68.0 5.44e-01 100.0% 73.3%
4998382 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.72 66.0 6.04e-01 100.0% 77.4%
3723094 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.71 66.0 6.21e-01 100.0% 85.5%
5023722 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.70 65.0 5.99e-01 100.0% 78.1%
4075272 2003.1.8.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › Mur_ligase 0.68 49.0 5.50e-01 94.3% 96.8%
3934495 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.67 62.0 5.49e-01 100.0% 94.3%
4953862 2003.1.8.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like 0.67 48.0 5.40e-01 95.1% 95.8%
4326351 2003.1.8.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.67 48.0 5.41e-01 96.7% 100.0%
3980278 7512.1.1.51 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_2 0.66 61.0 5.15e-01 100.0% 87.7%
3964135 7512.1.1.51 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_2 0.66 61.0 5.30e-01 100.0% 85.0%
4972410 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.65 60.0 5.00e-01 100.0% 86.8%
4960029 7567.1.1.1 a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.65 60.0 4.76e-01 100.0% 88.9%
3969430 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.65 60.0 5.21e-01 100.0% 84.4%
3721209 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.64 44.0 5.08e-01 82.8% 96.6%
3387588 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.64 60.0 5.26e-01 100.0% 95.4%
3627662 2007.15.1.9 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › MAP3K_TRAF_bd, DRHyd-ASK 0.64 47.0 4.16e-01 77.0% 65.6%
4396438 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.64 58.0 4.60e-01 100.0% 90.8%
3985289 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.64 58.0 4.92e-01 100.0% 87.5%
5047030 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 58.0 4.94e-01 100.0% 86.2%
5057668 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.63 57.0 4.78e-01 100.0% 88.1%
3235706 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.63 56.0 4.42e-01 100.0% 87.5%
4938031 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.63 58.0 4.91e-01 100.0% 86.7%
5014524 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.62 57.0 4.78e-01 100.0% 83.4%
5025478 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.62 57.0 4.85e-01 100.0% 96.9%
3456049 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.62 57.0 5.55e-01 100.0% 92.6%
3504837 7512.1.1.31 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 0.62 57.0 4.75e-01 100.0% 85.4%
4009876 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.62 56.0 4.99e-01 100.0% 86.3%
4974799 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.62 56.0 4.64e-01 100.0% 95.8%
5000028 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.62 56.0 4.89e-01 100.0% 97.3%
5074975 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.62 55.0 5.23e-01 97.5% 98.6%
4988213 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.62 56.0 4.69e-01 100.0% 87.3%
4093807 2003.1.1.35 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Polysacc_synt_2,Polysacc_syn_2C 0.61 56.0 4.01e-01 100.0% 64.1%
4438574 7512.1.1.10 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28 0.61 55.0 4.74e-01 100.0% 80.5%
5035028 7512.1.1.62 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_3 0.61 55.0 4.62e-01 100.0% 88.3%
2075040 2006.1.1.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.60 38.0 4.43e-01 71.3% 88.6%
3217626 7512.1.1.127 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_92 0.60 54.0 4.95e-01 100.0% 98.1%
3962861 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.59 54.0 4.85e-01 100.0% 75.6%
4953505 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.59 54.0 5.04e-01 100.0% 84.0%
5009891 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.59 54.0 4.69e-01 100.0% 95.7%
5029886 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.57 51.0 3.69e-01 98.4% 56.4%
5030143 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.56 50.0 3.92e-01 98.4% 72.1%
5031560 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.56 50.0 3.66e-01 97.5% 61.8%
4994127 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.55 49.0 3.96e-01 100.0% 95.0%
4928841 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.53 43.0 3.97e-01 91.8% 67.7%
3713665 7512.1.1.32 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.53 48.0 4.01e-01 100.0% 70.5%
3970650 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 46.0 3.68e-01 96.7% 62.0%
5051838 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.51 38.0 3.76e-01 91.8% 71.1%
D2 high residues 17-86
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fvvA02 1.20.1440.100 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function 0.70 62.0 6.10e-01 100.0% 97.3%
3vkgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.61 46.0 3.57e-01 81.4% 64.4%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.60 40.0 4.17e-01 85.7% 77.4%
2o5iN07 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.59 43.0 3.69e-01 77.1% 76.7%
1z6mA02 1.10.1200.90 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › DsbA-like domain 0.59 42.0 4.46e-01 97.1% 86.9%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 38.0 4.07e-01 80.0% 82.1%
6ko8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 44.0 3.38e-01 90.0% 49.7%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.57 44.0 4.64e-01 97.1% 96.8%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 47.0 4.87e-01 94.3% 95.5%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.55 47.0 4.54e-01 95.7% 94.9%
2nyvA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 43.0 4.46e-01 100.0% 95.3%
3d2eA06 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 41.0 3.66e-01 87.1% 61.1%
3qnmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 45.0 4.24e-01 97.1% 94.4%
4rm7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 40.0 3.38e-01 90.0% 85.6%
4iv6B01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.52 40.0 3.45e-01 85.7% 76.7%
2kxeA00 1.10.8.800 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain 0.50 34.0 3.42e-01 75.7% 69.4%
1ltmA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.50 41.0 3.22e-01 97.1% 75.1%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3970051 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.83 75.0 5.37e-01 100.0% 35.9%
3994704 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 53.0 5.45e-01 95.7% 96.9%
3988566 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.61 44.0 4.43e-01 78.6% 85.7%
3671293 509.1.1.12 alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PF25972 0.57 45.0 4.59e-01 90.0% 85.7%
3716062 253.1.1.1 a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C 0.57 46.0 3.40e-01 100.0% 32.2%
4121287 253.1.1.1 a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C 0.56 43.0 3.09e-01 85.7% 40.0%
3987138 253.1.1.1 a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C 0.55 45.0 3.12e-01 100.0% 25.4%
3592378 253.1.1.0 a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C 0.55 46.0 3.50e-01 100.0% 36.8%
4942003 1101.1.1.0 alpha bundles › Uncharacterized protein LPG2271 › Uncharacterized protein LPG2271 › Uncharacterized protein LPG2271 0.54 39.0 3.72e-01 81.4% 67.8%
3937617 170.1.1.0 alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C 0.52 38.0 3.64e-01 80.0% 74.1%
3644152 109.4.1.1273 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.52 36.0 3.27e-01 75.7% 80.0%
3305546 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.50 35.0 2.94e-01 77.1% 55.9%