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CAKLQF020000004.1__CAH1076716.1__SAMEA5780031_00945__00039
Bact-VirCAKLQF020000004.1__CAH1076716.1__SAMEA5780031_00945__00039
Identity
- Kingdom:
- phage
Quality
81.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-50_177-226
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01193.30 best | RNA_pol_L | 76.0 | 2.10e-21 | 81.8% | 98.7% |
| PF13656.12 | RNA_pol_L_2 | 28.8 | 1.10e-06 | 77.3% | 78.7% |
CATH (96)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.95 | 91.0 | 8.50e-01 | 100.0% | 88.3% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.91 | 85.0 | 7.95e-01 | 100.0% | 86.8% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.86 | 75.0 | 7.32e-01 | 100.0% | 86.2% |
| 4aybL00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.85 | 72.0 | 7.20e-01 | 100.0% | 86.8% |
| 5xogK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.84 | 73.0 | 6.68e-01 | 100.0% | 71.7% |
| 6ruiK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.84 | 75.0 | 7.05e-01 | 100.0% | 80.6% |
| 6gmhC01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.77 | 72.0 | 6.05e-01 | 100.0% | 84.9% |
| 5xogC01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.77 | 71.0 | 6.04e-01 | 100.0% | 90.4% |
| 3uebF00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.75 | 63.0 | 6.05e-01 | 89.8% | 93.0% |
| 3c19A01 | 3.30.70.1380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like | 0.73 | 57.0 | 5.53e-01 | 88.6% | 74.7% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 59.0 | 6.01e-01 | 90.9% | 91.8% |
| 3rkxA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.72 | 64.0 | 4.94e-01 | 100.0% | 69.0% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 56.0 | 5.42e-01 | 86.4% | 74.0% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 52.0 | 4.98e-01 | 87.5% | 66.3% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 59.0 | 5.36e-01 | 89.8% | 85.3% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.71 | 62.0 | 5.85e-01 | 97.7% | 89.8% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.70 | 54.0 | 5.29e-01 | 86.4% | 76.0% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 58.0 | 5.26e-01 | 89.8% | 87.2% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.70 | 56.0 | 4.73e-01 | 88.6% | 53.9% |
| 3w9iA06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.70 | 57.0 | 5.47e-01 | 88.6% | 88.2% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 52.0 | 5.38e-01 | 88.6% | 84.5% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 56.0 | 5.47e-01 | 89.8% | 78.6% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.69 | 58.0 | 5.28e-01 | 92.0% | 78.0% |
| 3bzmA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.69 | 62.0 | 3.96e-01 | 100.0% | 27.0% |
| 2uuvB01 | 3.40.462.40 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix | 0.69 | 59.0 | 4.13e-01 | 92.0% | 81.3% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 56.0 | 5.32e-01 | 88.6% | 75.2% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 50.0 | 5.27e-01 | 86.4% | 89.3% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 54.0 | 5.15e-01 | 86.4% | 72.3% |
| 8f4rA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.69 | 55.0 | 5.39e-01 | 86.4% | 91.7% |
| 1j6wA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.69 | 62.0 | 5.09e-01 | 100.0% | 62.1% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 52.0 | 5.20e-01 | 88.6% | 79.8% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 56.0 | 5.45e-01 | 88.6% | 81.1% |
| 3b82A06 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 47.0 | 4.27e-01 | 88.6% | 52.1% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 58.0 | 5.82e-01 | 92.0% | 97.7% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 57.0 | 5.56e-01 | 92.0% | 87.4% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 50.0 | 4.84e-01 | 87.5% | 69.7% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.67 | 56.0 | 4.32e-01 | 93.2% | 49.0% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 56.0 | 5.41e-01 | 92.0% | 84.0% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 56.0 | 5.30e-01 | 89.8% | 84.3% |
| 6ofsA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.67 | 58.0 | 4.61e-01 | 97.7% | 56.0% |
| 2ypyA00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.66 | 52.0 | 4.56e-01 | 92.0% | 56.0% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.66 | 55.0 | 5.64e-01 | 92.0% | 98.8% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 55.0 | 5.30e-01 | 89.8% | 80.6% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 53.0 | 5.00e-01 | 88.6% | 71.7% |
| 5d4nC00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 51.0 | 4.98e-01 | 93.2% | 74.5% |
| 4z9eA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.66 | 47.0 | 4.76e-01 | 73.9% | 100.0% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.66 | 54.0 | 4.09e-01 | 89.8% | 88.2% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 49.0 | 4.90e-01 | 87.5% | 78.7% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.65 | 53.0 | 5.28e-01 | 90.9% | 90.4% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.65 | 54.0 | 5.23e-01 | 92.0% | 89.1% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 53.0 | 5.05e-01 | 92.0% | 76.2% |
| 7qh7701 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.65 | 46.0 | 3.60e-01 | 79.5% | 33.8% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 50.0 | 4.99e-01 | 88.6% | 82.2% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 53.0 | 5.04e-01 | 89.8% | 83.5% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 52.0 | 5.13e-01 | 88.6% | 84.4% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 53.0 | 5.00e-01 | 89.8% | 81.1% |
| 4mt1A03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.64 | 54.0 | 5.25e-01 | 93.2% | 86.7% |
| 2qycA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 53.0 | 5.02e-01 | 88.6% | 79.4% |
| 2raaA00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.64 | 53.0 | 4.18e-01 | 89.8% | 94.4% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.63 | 53.0 | 5.49e-01 | 90.9% | 100.0% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.63 | 51.0 | 5.03e-01 | 90.9% | 87.5% |
| 2fgeA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.63 | 54.0 | 4.02e-01 | 98.9% | 72.4% |
| 3bf4A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 52.0 | 5.01e-01 | 89.8% | 88.9% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 46.0 | 4.44e-01 | 78.4% | 90.2% |
| 3kp0A03 | 3.30.30.60 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain | 0.62 | 40.0 | 4.47e-01 | 70.5% | 86.6% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 51.0 | 4.37e-01 | 88.6% | 94.4% |
| 6h05A00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.62 | 52.0 | 3.83e-01 | 92.0% | 87.3% |
| 4jb9H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 55.0 | 4.86e-01 | 100.0% | 86.3% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 47.0 | 5.02e-01 | 92.0% | 98.6% |
| 2pgcC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 5.09e-01 | 92.0% | 85.6% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 48.0 | 4.97e-01 | 93.2% | 94.9% |
| 1f5aA01 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.62 | 51.0 | 4.86e-01 | 93.2% | 81.3% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 48.0 | 4.14e-01 | 84.1% | 89.4% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 48.0 | 4.61e-01 | 85.2% | 77.7% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.61 | 42.0 | 4.13e-01 | 70.5% | 80.9% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.61 | 45.0 | 4.52e-01 | 78.4% | 100.0% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 48.0 | 4.85e-01 | 89.8% | 87.5% |
| 5xyiY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 4.14e-01 | 77.3% | 66.7% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 48.0 | 4.84e-01 | 92.0% | 87.6% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.59 | 49.0 | 4.29e-01 | 92.0% | 75.9% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.59 | 41.0 | 4.56e-01 | 72.7% | 95.6% |
| 2bj0A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.59 | 53.0 | 4.06e-01 | 100.0% | 78.8% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.59 | 40.0 | 4.45e-01 | 70.5% | 95.5% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 42.0 | 3.28e-01 | 77.3% | 95.6% |
| 2wp4B00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.58 | 49.0 | 4.30e-01 | 93.2% | 75.0% |
| 1we8A01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 47.0 | 4.77e-01 | 90.9% | 91.7% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 50.0 | 4.78e-01 | 96.6% | 85.6% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.61e-01 | 96.6% | 86.5% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 44.0 | 3.94e-01 | 83.0% | 63.6% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 42.0 | 3.26e-01 | 79.5% | 36.1% |
| 4gafB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 4.53e-01 | 96.6% | 83.6% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 47.0 | 4.43e-01 | 95.5% | 76.6% |
| 3bn3B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.31e-01 | 96.6% | 83.7% |
| 4exkA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.54e-01 | 96.6% | 82.7% |
| 4ponA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 40.0 | 3.25e-01 | 77.3% | 85.5% |
| 1k3eB02 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 45.0 | 4.32e-01 | 100.0% | 88.6% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4541115 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.99 | 97.0 | 8.33e-01 | 100.0% | 73.6% |
| 4665957 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.99 | 96.0 | 8.86e-01 | 100.0% | 82.9% |
| 4427322 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.98 | 95.0 | 8.35e-01 | 100.0% | 75.0% |
| 4105404 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.98 | 95.0 | 8.49e-01 | 100.0% | 78.3% |
| 4121485 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.98 | 95.0 | 7.84e-01 | 100.0% | 80.7% |
| 4567458 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.97 | 94.0 | 8.38e-01 | 100.0% | 82.6% |
| 4292444 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.97 | 94.0 | 8.37e-01 | 100.0% | 82.6% |
| 4169524 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.97 | 94.0 | 8.35e-01 | 100.0% | 82.6% |
| 4614530 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.96 | 93.0 | 8.15e-01 | 100.0% | 80.0% |
| 4138489 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.96 | 92.0 | 8.42e-01 | 100.0% | 82.7% |
| 4397160 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.96 | 92.0 | 7.93e-01 | 100.0% | 75.2% |
| 4187121 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.95 | 91.0 | 8.05e-01 | 100.0% | 76.7% |
| 4057397 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.95 | 91.0 | 8.16e-01 | 100.0% | 85.2% |
| 4464468 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.95 | 91.0 | 8.31e-01 | 100.0% | 87.3% |
| 4127225 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.95 | 91.0 | 8.14e-01 | 100.0% | 83.5% |
| 4319533 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.94 | 90.0 | 7.47e-01 | 100.0% | 70.7% |
| 4403450 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.93 | 89.0 | 7.86e-01 | 100.0% | 78.3% |
| 4342449 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.92 | 88.0 | 7.75e-01 | 100.0% | 81.7% |
| 4607326 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.91 | 87.0 | 8.08e-01 | 100.0% | 86.7% |
| 4196274 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.91 | 86.0 | 7.74e-01 | 100.0% | 86.1% |
| 4350670 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.90 | 85.0 | 7.81e-01 | 100.0% | 82.7% |
| 4028502 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.89 | 85.0 | 7.49e-01 | 100.0% | 84.2% |
| 4591683 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.89 | 82.0 | 7.98e-01 | 96.6% | 93.7% |
| 4135761 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.89 | 84.0 | 7.45e-01 | 100.0% | 95.0% |
| 4272563 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.89 | 84.0 | 8.03e-01 | 100.0% | 88.0% |
| 4376910 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.83 | 79.0 | 7.68e-01 | 100.0% | 95.8% |
| 3602899 | 305.1.1.2 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 | 0.80 | 74.0 | 7.20e-01 | 100.0% | 91.6% |
| 3276499 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.79 | 75.0 | 7.00e-01 | 100.0% | 83.8% |
| 4968810 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.79 | 71.0 | 7.08e-01 | 97.7% | 93.3% |
| 4954449 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.76 | 57.0 | 5.51e-01 | 79.5% | 72.7% |
| 4503821 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.74 | 54.0 | 5.97e-01 | 79.5% | 97.1% |
| 3589403 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.73 | 53.0 | 4.79e-01 | 76.1% | 65.8% |
| 4938121 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.72 | 60.0 | 6.14e-01 | 90.9% | 95.3% |
| 4380080 | 880.1.1.4 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › PF30495 | 0.72 | 64.0 | 4.11e-01 | 100.0% | 27.5% |
| 5029187 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.72 | 59.0 | 6.04e-01 | 87.5% | 97.6% |
| 3667432 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 64.0 | 6.29e-01 | 100.0% | 95.8% |
| 4945381 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.71 | 55.0 | 5.66e-01 | 88.6% | 85.9% |
| 3602951 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.71 | 59.0 | 5.62e-01 | 90.9% | 81.0% |
| 3838763 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.71 | 56.0 | 5.76e-01 | 86.4% | 89.4% |
| 3946660 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.70 | 59.0 | 5.36e-01 | 93.2% | 75.8% |
| 3934937 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.70 | 54.0 | 4.22e-01 | 83.0% | 41.6% |
| 5016876 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.70 | 58.0 | 5.51e-01 | 90.9% | 78.1% |
| 3802659 | 304.8.1.66 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 | 0.70 | 62.0 | 5.86e-01 | 100.0% | 91.4% |
| 4937786 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.69 | 54.0 | 5.24e-01 | 87.5% | 74.0% |
| 4986253 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.69 | 58.0 | 5.43e-01 | 92.0% | 80.0% |
| 4020396 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.69 | 57.0 | 5.69e-01 | 89.8% | 87.8% |
| 3969704 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.69 | 57.0 | 5.53e-01 | 90.9% | 82.0% |
| 4967398 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.69 | 57.0 | 5.52e-01 | 90.9% | 82.0% |
| 3898132 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.69 | 56.0 | 4.73e-01 | 88.6% | 54.3% |
| 4096709 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.69 | 56.0 | 5.50e-01 | 88.6% | 86.3% |
| 3931929 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.68 | 53.0 | 4.01e-01 | 83.0% | 40.0% |
| 3974775 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.68 | 54.0 | 5.32e-01 | 88.6% | 80.0% |
| 4162002 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.68 | 59.0 | 4.70e-01 | 95.5% | 99.4% |
| 4970335 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.68 | 56.0 | 5.62e-01 | 90.9% | 90.0% |
| 4996724 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.68 | 56.0 | 5.54e-01 | 90.9% | 86.3% |
| 4433673 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.68 | 57.0 | 5.42e-01 | 92.0% | 83.5% |
| 4959038 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.68 | 56.0 | 5.74e-01 | 90.9% | 96.5% |
| 4063438 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.67 | 57.0 | 5.61e-01 | 92.0% | 93.5% |
| 4931048 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.67 | 55.0 | 5.30e-01 | 90.9% | 83.0% |
| 4930552 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.67 | 53.0 | 5.56e-01 | 90.9% | 93.8% |
| 4422649 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.67 | 55.0 | 5.40e-01 | 89.8% | 90.4% |
| 3418881 | 304.8.1.66 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 | 0.67 | 58.0 | 5.48e-01 | 100.0% | 95.5% |
| 1172545 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.66 | 54.0 | 5.22e-01 | 90.9% | 80.4% |
| 4937238 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.66 | 54.0 | 5.17e-01 | 90.9% | 80.0% |
| 3822124 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.66 | 55.0 | 5.21e-01 | 92.0% | 85.7% |
| 4562438 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.65 | 54.0 | 4.42e-01 | 90.9% | 49.1% |
| 3924669 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 54.0 | 5.31e-01 | 92.0% | 86.3% |
| 3285005 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.65 | 53.0 | 4.28e-01 | 90.9% | 45.9% |
| 3633972 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.65 | 53.0 | 5.01e-01 | 90.9% | 93.3% |
| 4242666 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.65 | 56.0 | 5.21e-01 | 96.6% | 80.0% |
| 4031950 | 304.4.1.73 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF4865 | 0.65 | 52.0 | 4.93e-01 | 87.5% | 77.1% |
| 4627986 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.64 | 55.0 | 5.18e-01 | 96.6% | 80.0% |
| 4483977 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.64 | 54.0 | 5.22e-01 | 93.2% | 86.0% |
| 3778963 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.64 | 52.0 | 4.78e-01 | 90.9% | 70.0% |
| 5050905 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.64 | 56.0 | 4.37e-01 | 96.6% | 73.2% |
| 1731578 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.64 | 53.0 | 4.99e-01 | 88.6% | 80.8% |
| 3497745 | 309.1.1.11 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 | 0.64 | 55.0 | 3.96e-01 | 100.0% | 38.2% |
| 3499425 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.64 | 51.0 | 4.77e-01 | 88.6% | 91.7% |
| 3597827 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 50.0 | 5.00e-01 | 88.6% | 84.4% |
| 4971398 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.63 | 50.0 | 4.72e-01 | 88.6% | 70.0% |
| 3778612 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.63 | 51.0 | 4.93e-01 | 90.9% | 86.0% |
| 4265436 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.63 | 46.0 | 4.42e-01 | 77.3% | 70.0% |
| 3735466 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 52.0 | 4.24e-01 | 92.0% | 85.3% |
| 3171153 | 304.9.1.163 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30026 | 0.62 | 49.0 | 4.85e-01 | 86.4% | 82.1% |
| 3727518 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 50.0 | 4.68e-01 | 89.8% | 75.5% |
| 3903912 | 304.8.1.15 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › TH_ACT | 0.62 | 52.0 | 4.83e-01 | 93.2% | 75.5% |
| 3222628 | 304.9.1.80 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF27577 | 0.61 | 49.0 | 4.11e-01 | 93.2% | 50.3% |
| 3690532 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.61 | 49.0 | 3.72e-01 | 87.5% | 61.0% |
| 3268891 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 51.0 | 3.78e-01 | 95.5% | 35.5% |
| 4975579 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 53.0 | 4.43e-01 | 100.0% | 65.8% |
| 3684759 | 331.3.1.10 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL | 0.60 | 49.0 | 4.06e-01 | 92.0% | 92.9% |
| 4008366 | 812.1.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain | 0.60 | 43.0 | 4.36e-01 | 78.4% | 82.2% |
| 4001734 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.59 | 48.0 | 4.45e-01 | 90.9% | 80.0% |
| 3690383 | 304.4.1.58 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dehydratase_hem | 0.59 | 48.0 | 4.61e-01 | 92.0% | 79.0% |
| 3955643 | 325.1.2.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Molybdopterin synthase subunit MoaE › MoaE | 0.58 | 50.0 | 4.32e-01 | 96.6% | 75.7% |
| 3789238 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 48.0 | 4.46e-01 | 94.3% | 74.8% |
| 3917810 | 304.166.1.6 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › KIAA1549 | 0.55 | 46.0 | 4.40e-01 | 94.3% | 87.6% |
| 5050618 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 40.0 | 3.44e-01 | 78.4% | 56.4% |
| 4201044 | 304.109.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › PF27137 | 0.54 | 47.0 | 4.29e-01 | 100.0% | 80.8% |
D2
high
residues 55-165
Domain cluster:
rep: H359L__YP_009703169__African_swine_fever_virus__10497__D69-167
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01000.32 best | RNA_pol_A_bac | 96.4 | 1.90e-27 | 94.6% | 85.7% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bdfB02 | 2.170.120.12 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › DNA-directed RNA polymerase, insert domain | 0.93 | 90.0 | 8.64e-01 | 100.0% | 91.0% |
| 8dkcB01 | 2.170.120.12 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › DNA-directed RNA polymerase, insert domain | 0.91 | 87.0 | 8.34e-01 | 100.0% | 92.7% |
| 4noiA02 | 2.170.120.12 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › DNA-directed RNA polymerase, insert domain | 0.88 | 84.0 | 8.12e-01 | 100.0% | 91.7% |
| 2pa8D02 | 2.170.120.12 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › DNA-directed RNA polymerase, insert domain | 0.82 | 70.0 | 6.87e-01 | 89.2% | 95.8% |
| 6ruiC02 | 2.170.120.12 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › DNA-directed RNA polymerase, insert domain | 0.82 | 70.0 | 6.39e-01 | 89.2% | 97.8% |
| 1twfC02 | 2.170.120.12 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › DNA-directed RNA polymerase, insert domain | 0.80 | 68.0 | 6.49e-01 | 89.2% | 97.6% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4086444 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.97 | 95.0 | 8.89e-01 | 100.0% | 88.5% |
| 4366396 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.97 | 95.0 | 9.01e-01 | 100.0% | 88.8% |
| 4886343 | 305.1.1.8 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_A_bac | 0.95 | 91.0 | 8.81e-01 | 100.0% | 90.8% |
| 4377531 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.94 | 87.0 | 8.45e-01 | 100.0% | 88.3% |
| 4239810 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.94 | 92.0 | 8.56e-01 | 100.0% | 90.8% |
| 4598979 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.94 | 91.0 | 8.64e-01 | 100.0% | 88.8% |
| 4042963 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.94 | 91.0 | 8.65e-01 | 100.0% | 88.8% |
| 4376721 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.93 | 90.0 | 8.61e-01 | 100.0% | 90.4% |
| 4453540 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.92 | 89.0 | 8.65e-01 | 100.0% | 94.2% |
| 4563131 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.92 | 78.0 | 7.55e-01 | 87.4% | 99.2% |
| 4466958 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.92 | 89.0 | 8.18e-01 | 100.0% | 91.1% |
| 4109009 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.91 | 88.0 | 8.11e-01 | 100.0% | 91.1% |
| 4667643 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.91 | 78.0 | 7.55e-01 | 88.3% | 94.2% |
| 4343499 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.91 | 87.0 | 7.61e-01 | 100.0% | 85.2% |
| 4546109 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.90 | 75.0 | 7.62e-01 | 86.5% | 99.1% |
| 4657592 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.90 | 87.0 | 8.41e-01 | 100.0% | 92.5% |
| 4488176 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.90 | 86.0 | 8.10e-01 | 100.0% | 92.3% |
| 4607167 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.90 | 76.0 | 7.52e-01 | 88.3% | 98.3% |
| 4047627 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.89 | 86.0 | 8.02e-01 | 100.0% | 93.1% |
| 4086607 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.89 | 85.0 | 8.14e-01 | 100.0% | 92.0% |
| 4181066 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.89 | 74.0 | 7.49e-01 | 87.4% | 99.1% |
| 3838103 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.88 | 85.0 | 7.94e-01 | 100.0% | 90.0% |
| 4028501 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.88 | 84.0 | 8.06e-01 | 100.0% | 94.4% |
| 4305536 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.88 | 84.0 | 7.79e-01 | 100.0% | 94.1% |
| 3105800 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.88 | 84.0 | 8.12e-01 | 100.0% | 90.2% |
| 4026272 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.88 | 84.0 | 7.75e-01 | 100.0% | 95.6% |
| 4480187 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.88 | 84.0 | 7.78e-01 | 100.0% | 95.6% |
| 4101850 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.87 | 83.0 | 7.59e-01 | 100.0% | 90.7% |
| 2714986 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.87 | 80.0 | 7.82e-01 | 100.0% | 90.0% |
| 4226271 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.87 | 75.0 | 6.88e-01 | 91.0% | 88.6% |
| 4937884 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.87 | 72.0 | 7.44e-01 | 89.2% | 91.4% |
| 4507610 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.86 | 83.0 | 7.06e-01 | 100.0% | 93.3% |
| 4317994 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.84 | 80.0 | 7.67e-01 | 100.0% | 90.4% |
| 4391338 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.84 | 81.0 | 7.85e-01 | 100.0% | 92.5% |
| 4415836 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.83 | 71.0 | 6.93e-01 | 89.2% | 97.5% |
| 5033389 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.83 | 71.0 | 6.92e-01 | 89.2% | 90.8% |
| 4943253 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.83 | 71.0 | 6.79e-01 | 89.2% | 91.2% |
| 3716053 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.83 | 71.0 | 6.45e-01 | 89.2% | 92.1% |
| 5026826 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.82 | 70.0 | 6.85e-01 | 89.2% | 93.3% |
| 5043747 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.82 | 70.0 | 6.83e-01 | 89.2% | 93.3% |
| 4995400 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.82 | 70.0 | 6.82e-01 | 89.2% | 95.0% |
| 3482802 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.81 | 69.0 | 6.10e-01 | 89.2% | 94.8% |
| 4141296 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.50 | 28.0 | 3.30e-01 | 92.8% | 80.0% |
D3
high
residues 249-307
Domain cluster:
rep: SRR1747065_scaffold_10_prodigal-single.1__X__X__00072__D88-160
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03118.22 best | RNA_pol_A_CTD | 87.5 | 5.30e-25 | 100.0% | 83.6% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zj8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.80 | 65.0 | 6.59e-01 | 89.8% | 94.7% |
| 1y88A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.79 | 66.0 | 6.63e-01 | 93.2% | 91.5% |
| 2dl0A01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.75 | 61.0 | 6.14e-01 | 93.2% | 98.3% |
| 3bs7A00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.73 | 62.0 | 5.83e-01 | 100.0% | 88.0% |
| 2i1qA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.73 | 59.0 | 5.84e-01 | 89.8% | 87.1% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.72 | 61.0 | 5.49e-01 | 100.0% | 80.7% |
| 2zxiA04 | 1.10.150.570 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GidA associated domain, C-terminal subdomain | 0.72 | 57.0 | 5.91e-01 | 96.6% | 96.2% |
| 4is7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.71 | 60.0 | 5.72e-01 | 98.3% | 84.7% |
| 6ifsB02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.70 | 45.0 | 4.24e-01 | 100.0% | 54.9% |
| 2q0zX02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.68 | 55.0 | 5.56e-01 | 93.2% | 96.6% |
| 2bgwA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.66 | 53.0 | 5.04e-01 | 93.2% | 78.4% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 44.0 | 3.23e-01 | 72.9% | 72.8% |
| 2pl3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 55.0 | 3.61e-01 | 98.3% | 88.8% |
| 3berA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 3.56e-01 | 100.0% | 94.5% |
| 1vecA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 51.0 | 3.51e-01 | 98.3% | 98.5% |
| 4iejA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 42.0 | 4.01e-01 | 98.3% | 86.7% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4559902 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.99 | 95.0 | 8.88e-01 | 100.0% | 84.3% |
| 4506619 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.99 | 95.0 | 7.55e-01 | 100.0% | 56.2% |
| 1292856 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.99 | 95.0 | 8.38e-01 | 100.0% | 73.8% |
| 4255937 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.99 | 95.0 | 7.98e-01 | 100.0% | 65.6% |
| 4350221 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.98 | 95.0 | 8.31e-01 | 100.0% | 73.8% |
| 4082618 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.98 | 93.0 | 8.42e-01 | 100.0% | 78.7% |
| 4474556 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.97 | 91.0 | 9.06e-01 | 98.3% | 96.7% |
| 4228076 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.97 | 92.0 | 8.86e-01 | 100.0% | 90.8% |
| 4201496 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.97 | 92.0 | 8.35e-01 | 100.0% | 80.0% |
| 4538575 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.96 | 91.0 | 7.54e-01 | 100.0% | 62.1% |
| 4546157 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.95 | 90.0 | 8.19e-01 | 100.0% | 80.0% |
| 4497953 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.95 | 89.0 | 7.92e-01 | 100.0% | 77.5% |
| 4285151 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.95 | 87.0 | 8.40e-01 | 98.3% | 87.7% |
| 4155947 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.94 | 86.0 | 8.62e-01 | 96.6% | 95.0% |
| 4340260 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.93 | 86.0 | 8.46e-01 | 100.0% | 93.7% |
| 4168206 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.87 | 79.0 | 7.06e-01 | 98.3% | 86.3% |
| 3554607 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.87 | 79.0 | 7.11e-01 | 100.0% | 77.5% |
| 3410797 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.87 | 73.0 | 7.30e-01 | 91.5% | 95.0% |
| 3869571 | 102.1.1.179 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_XRCC3_RpoA | 0.86 | 74.0 | 6.95e-01 | 93.2% | 78.6% |
| 4442475 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.85 | 72.0 | 6.94e-01 | 96.6% | 83.1% |
| 3929386 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 76.0 | 7.22e-01 | 100.0% | 88.6% |
| 3443197 | 102.1.1.179 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_XRCC3_RpoA | 0.84 | 75.0 | 7.48e-01 | 98.3% | 96.7% |
| 4669271 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.83 | 78.0 | 7.32e-01 | 100.0% | 91.4% |
| 3057038 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 74.0 | 7.33e-01 | 100.0% | 95.1% |
| 3487665 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 72.0 | 7.24e-01 | 100.0% | 95.0% |
| 4403062 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 75.0 | 7.11e-01 | 100.0% | 84.3% |
| 4031699 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 68.0 | 7.05e-01 | 93.2% | 96.4% |
| 3717161 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 72.0 | 6.51e-01 | 96.6% | 77.5% |
| 4345341 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.82 | 74.0 | 6.64e-01 | 100.0% | 75.0% |
| 3189901 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 74.0 | 7.00e-01 | 100.0% | 88.6% |
| 4272019 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 74.0 | 7.23e-01 | 100.0% | 90.8% |
| 5052765 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.81 | 69.0 | 6.58e-01 | 94.9% | 81.4% |
| 5061478 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.81 | 66.0 | 6.30e-01 | 91.5% | 81.4% |
| 3591519 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.80 | 69.0 | 6.48e-01 | 94.9% | 85.7% |
| 3990995 | 102.1.1.50 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › CEP-1_C | 0.80 | 70.0 | 6.22e-01 | 100.0% | 74.1% |
| 3606374 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 70.0 | 6.38e-01 | 100.0% | 82.5% |
| 3718993 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 60.0 | 6.20e-01 | 98.3% | 87.3% |
| 3968390 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 64.0 | 6.20e-01 | 93.2% | 81.5% |
| 2951 | 102.1.1.52 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › AF1548-like_C | 0.79 | 66.0 | 6.63e-01 | 93.2% | 91.5% |
| 5056035 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 65.0 | 6.52e-01 | 91.5% | 90.0% |
| 3882238 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.78 | 67.0 | 6.42e-01 | 100.0% | 90.0% |
| 3264576 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 69.0 | 6.38e-01 | 100.0% | 89.3% |
| 4981273 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.78 | 64.0 | 6.44e-01 | 89.8% | 93.2% |
| 4999572 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.77 | 64.0 | 6.41e-01 | 93.2% | 91.7% |
| 3495288 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.77 | 67.0 | 6.26e-01 | 100.0% | 84.0% |
| 3907308 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.77 | 67.0 | 6.27e-01 | 100.0% | 82.7% |
| 5081275 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 64.0 | 6.21e-01 | 93.2% | 87.7% |
| 4185537 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 61.0 | 6.24e-01 | 93.2% | 94.5% |
| 3935391 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 65.0 | 6.12e-01 | 94.9% | 87.1% |
| None | — | 0.76 | 54.0 | 3.56e-01 | 74.6% | 44.9% | |
| 5073600 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.76 | 63.0 | 6.33e-01 | 93.2% | 91.7% |
| 3234897 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.76 | 64.0 | 5.90e-01 | 98.3% | 76.2% |
| 4977890 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 60.0 | 5.86e-01 | 93.2% | 81.5% |
| 3570848 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.75 | 64.0 | 6.02e-01 | 100.0% | 81.3% |
| 5022597 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 65.0 | 6.31e-01 | 100.0% | 87.7% |
| 3403272 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 64.0 | 6.28e-01 | 100.0% | 87.7% |
| 5039718 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 59.0 | 6.06e-01 | 89.8% | 98.2% |
| 3919158 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 62.0 | 6.22e-01 | 93.2% | 95.0% |
| 3895315 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 62.0 | 5.37e-01 | 93.2% | 63.3% |
| 4597170 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 65.0 | 6.16e-01 | 100.0% | 84.3% |
| 3389838 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 61.0 | 5.64e-01 | 93.2% | 80.0% |
| 3497612 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 62.0 | 5.37e-01 | 100.0% | 70.5% |
| 3713961 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 65.0 | 5.34e-01 | 100.0% | 65.7% |
| 3704043 | 102.1.2.26 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › DUF7578 | 0.72 | 65.0 | 4.93e-01 | 100.0% | 91.9% |
| 3718577 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 65.0 | 5.64e-01 | 100.0% | 87.8% |
| 3711616 | 101.1.1.329 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7578 | 0.72 | 65.0 | 4.70e-01 | 100.0% | 77.5% |
| 3713180 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.72 | 65.0 | 5.99e-01 | 100.0% | 92.0% |
| 3702954 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 65.0 | 6.11e-01 | 100.0% | 91.4% |
| 2330608 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.71 | 61.0 | 5.27e-01 | 100.0% | 76.3% |
| 3865559 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.71 | 58.0 | 5.81e-01 | 93.2% | 93.3% |
| 3703345 | 102.1.1.95 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF7578 | 0.70 | 63.0 | 4.73e-01 | 100.0% | 87.9% |
| 4940020 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.70 | 59.0 | 5.13e-01 | 93.2% | 62.9% |
| 4982189 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.70 | 61.0 | 5.83e-01 | 100.0% | 88.6% |
| None | — | 0.69 | 53.0 | 3.40e-01 | 81.4% | 38.5% | |
| 3717703 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 57.0 | 5.72e-01 | 96.6% | 100.0% |
| 3701318 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 55.0 | 5.56e-01 | 91.5% | 91.7% |
| 3617542 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.68 | 55.0 | 5.54e-01 | 93.2% | 93.3% |
| 3265084 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.67 | 50.0 | 3.24e-01 | 79.7% | 38.5% |
| 3784767 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.63 | 56.0 | 3.29e-01 | 98.3% | 42.3% |
| 3488698 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.63 | 56.0 | 3.59e-01 | 98.3% | 80.3% |
| 4383890 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.62 | 54.0 | 3.55e-01 | 96.6% | 83.3% |
| 3296267 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.61 | 54.0 | 3.48e-01 | 98.3% | 75.8% |
| 3483470 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 55.0 | 3.55e-01 | 98.3% | 82.7% |
| 3475165 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.61 | 54.0 | 3.56e-01 | 98.3% | 93.3% |
| 3391993 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.61 | 54.0 | 3.19e-01 | 98.3% | 44.6% |
| 4073388 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.60 | 52.0 | 3.47e-01 | 98.3% | 90.8% |
| 3688531 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.60 | 53.0 | 3.16e-01 | 98.3% | 49.5% |
| 3180124 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.59 | 50.0 | 3.27e-01 | 98.3% | 77.9% |
| 4558771 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.59 | 51.0 | 3.05e-01 | 100.0% | 47.0% |