←Back to structures
CAKLQF020000004.1__CAH1076839.1__SAMEA5780031_01052__00146
Bact-VirCAKLQF020000004.1__CAH1076839.1__SAMEA5780031_01052__00146
Identity
- Kingdom:
- phage
Quality
95.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-158
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01746.27 best | tRNA_m1G_MT | 183.0 | 8.20e-54 | 100.0% | 66.8% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p9pA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.98 | 93.0 | 9.30e-01 | 100.0% | 95.6% |
| 1oy5A01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.94 | 87.0 | 8.64e-01 | 100.0% | 92.5% |
| 3quvA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.91 | 86.0 | 8.45e-01 | 100.0% | 92.7% |
| 1to0D00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.74 | 65.0 | 6.66e-01 | 100.0% | 95.3% |
| 1ns5B00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.74 | 64.0 | 6.52e-01 | 100.0% | 93.5% |
| 1v2xA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.65 | 57.0 | 5.29e-01 | 100.0% | 75.9% |
| 3gyqA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.64 | 57.0 | 5.60e-01 | 100.0% | 89.6% |
| 5kzkA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.63 | 55.0 | 5.58e-01 | 100.0% | 93.6% |
| 4l69A02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.61 | 58.0 | 5.55e-01 | 100.0% | 96.6% |
| 3ktyA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.61 | 56.0 | 5.57e-01 | 100.0% | 95.7% |
| 1gz0B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.60 | 54.0 | 5.31e-01 | 100.0% | 89.2% |
| 2v3jA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.60 | 56.0 | 5.15e-01 | 99.4% | 98.0% |
| 3d8uB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 41.0 | 4.68e-01 | 100.0% | 92.5% |
| 3bbdA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.59 | 55.0 | 5.05e-01 | 100.0% | 99.5% |
| 4j3cB02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.59 | 55.0 | 5.46e-01 | 100.0% | 97.0% |
| 3o7bA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.59 | 55.0 | 4.91e-01 | 100.0% | 97.2% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.59 | 36.0 | 4.14e-01 | 97.5% | 83.3% |
| 2egvA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.58 | 54.0 | 5.36e-01 | 100.0% | 95.7% |
| 3hhfA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 34.0 | 4.17e-01 | 98.1% | 92.1% |
| 3hbaA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.56 | 43.0 | 4.01e-01 | 100.0% | 66.0% |
| 1gcaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.51e-01 | 100.0% | 89.2% |
| 3aawC01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.53 | 47.0 | 4.14e-01 | 99.4% | 65.6% |
| 3cnbA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 4.25e-01 | 100.0% | 94.4% |
| 2xvyA01 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 42.0 | 4.43e-01 | 99.4% | 95.7% |
| 4gw3A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 3.83e-01 | 100.0% | 95.8% |
| 3rotA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 34.0 | 3.59e-01 | 97.5% | 75.9% |
| 4n82B00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 44.0 | 4.53e-01 | 100.0% | 98.7% |
| 2vqmA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.50 | 46.0 | 3.44e-01 | 100.0% | 84.4% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4611481 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 1.00 | 99.0 | 7.90e-01 | 100.0% | 59.2% |
| 3966608 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.99 | 95.0 | 7.90e-01 | 100.0% | 62.9% |
| 4164317 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.99 | 97.0 | 7.75e-01 | 100.0% | 61.0% |
| 3067438 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.98 | 94.0 | 7.74e-01 | 100.0% | 61.7% |
| 4286524 | 2488.1.1.22 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT, Methyltrn_RNA_4 | 0.97 | 91.0 | 6.29e-01 | 100.0% | 35.5% |
| 3386828 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.97 | 92.0 | 7.80e-01 | 100.0% | 66.1% |
| 4291293 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.97 | 90.0 | 7.40e-01 | 100.0% | 59.6% |
| 4270738 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.96 | 91.0 | 7.76e-01 | 100.0% | 67.1% |
| 4036409 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.96 | 94.0 | 7.57e-01 | 100.0% | 60.8% |
| 4286781 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.95 | 89.0 | 7.58e-01 | 100.0% | 65.7% |
| 3385750 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.78 | 66.0 | 6.72e-01 | 100.0% | 90.8% |
| 4391160 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.76 | 66.0 | 6.76e-01 | 100.0% | 93.5% |
| 4650201 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.76 | 65.0 | 6.74e-01 | 100.0% | 96.6% |
| 4514635 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.76 | 66.0 | 6.84e-01 | 100.0% | 97.9% |
| 4310308 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.76 | 60.0 | 6.48e-01 | 100.0% | 95.6% |
| 4128223 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.76 | 66.0 | 6.74e-01 | 100.0% | 94.7% |
| 4664110 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.75 | 61.0 | 6.31e-01 | 100.0% | 90.0% |
| 4518009 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.75 | 65.0 | 6.68e-01 | 100.0% | 95.3% |
| 4402852 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.74 | 65.0 | 6.56e-01 | 100.0% | 92.3% |
| 4246157 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.74 | 63.0 | 6.60e-01 | 100.0% | 97.9% |
| 3418618 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.74 | 65.0 | 6.49e-01 | 100.0% | 90.6% |
| 4097998 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.73 | 65.0 | 6.56e-01 | 100.0% | 94.2% |
| 4448180 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.73 | 65.0 | 6.58e-01 | 100.0% | 95.5% |
| 3970834 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.73 | 63.0 | 6.49e-01 | 100.0% | 96.7% |
| 4385772 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.72 | 67.0 | 6.59e-01 | 100.0% | 95.9% |
| 4366821 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.71 | 64.0 | 6.45e-01 | 100.0% | 96.1% |
| 3636206 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.66 | 30.0 | 3.20e-01 | 84.1% | 45.7% |
| 4995955 | 2488.1.1.4 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Trm56 | 0.66 | 58.0 | 5.56e-01 | 100.0% | 81.1% |
| 5062202 | 2488.1.1.4 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Trm56 | 0.66 | 57.0 | 5.61e-01 | 100.0% | 86.1% |
| 4945877 | 2488.1.1.4 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Trm56 | 0.65 | 58.0 | 5.83e-01 | 100.0% | 91.9% |
| 5073945 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.65 | 61.0 | 5.54e-01 | 100.0% | 99.0% |
| 4943508 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.65 | 61.0 | 5.44e-01 | 100.0% | 96.7% |
| 5034739 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.65 | 61.0 | 5.53e-01 | 100.0% | 99.0% |
| 5043073 | 2488.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 | 0.65 | 61.0 | 5.56e-01 | 100.0% | 99.5% |
| 4978943 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.65 | 61.0 | 5.23e-01 | 100.0% | 94.0% |
| 4977070 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.65 | 61.0 | 5.23e-01 | 100.0% | 94.5% |
| 3960921 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.64 | 58.0 | 5.70e-01 | 100.0% | 89.7% |
| 5039095 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.64 | 60.0 | 4.98e-01 | 100.0% | 84.9% |
| 3701007 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.64 | 53.0 | 5.36e-01 | 100.0% | 86.3% |
| 5045222 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.64 | 60.0 | 5.62e-01 | 100.0% | 98.4% |
| 5036701 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.64 | 60.0 | 5.25e-01 | 100.0% | 96.1% |
| 4943643 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.64 | 59.0 | 5.54e-01 | 98.7% | 98.4% |
| 4989247 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.64 | 60.0 | 5.23e-01 | 100.0% | 96.1% |
| 5077067 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.64 | 60.0 | 5.15e-01 | 100.0% | 93.2% |
| 5026728 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.64 | 60.0 | 5.18e-01 | 100.0% | 95.7% |
| 3420930 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.64 | 55.0 | 5.06e-01 | 100.0% | 72.0% |
| 5065017 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.63 | 59.0 | 5.10e-01 | 100.0% | 92.0% |
| 3635322 | 2488.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 | 0.63 | 59.0 | 4.97e-01 | 100.0% | 94.5% |
| 5023884 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.63 | 55.0 | 5.54e-01 | 100.0% | 90.6% |
| 395977 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.63 | 56.0 | 5.40e-01 | 100.0% | 83.5% |
| 4928429 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.63 | 58.0 | 5.15e-01 | 98.7% | 98.2% |
| 2097586 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.63 | 55.0 | 5.51e-01 | 100.0% | 90.7% |
| 5051218 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.63 | 58.0 | 5.14e-01 | 100.0% | 97.3% |
| 3956254 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.63 | 56.0 | 5.47e-01 | 100.0% | 86.7% |
| 4948047 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.62 | 58.0 | 5.04e-01 | 100.0% | 95.3% |
| 4946358 | 2488.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › DUF2122 | 0.62 | 55.0 | 5.56e-01 | 100.0% | 93.7% |
| 5000793 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.62 | 58.0 | 5.11e-01 | 100.0% | 98.7% |
| 3190819 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.62 | 58.0 | 4.96e-01 | 100.0% | 89.3% |
| 4990531 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.62 | 58.0 | 5.07e-01 | 100.0% | 96.0% |
| 1285881 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.62 | 55.0 | 5.54e-01 | 100.0% | 93.1% |
| 4375037 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.62 | 58.0 | 5.11e-01 | 100.0% | 98.6% |
| 4930896 | 2488.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 | 0.62 | 58.0 | 5.40e-01 | 100.0% | 98.9% |
| 4024132 | 2488.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 | 0.62 | 58.0 | 5.07e-01 | 100.0% | 98.2% |
| 4029846 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.62 | 57.0 | 5.09e-01 | 100.0% | 94.5% |
| 4358638 | 2488.1.1.12 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA | 0.61 | 57.0 | 5.57e-01 | 100.0% | 94.8% |
| 1828345 | 2488.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Ribo_biogen_C | 0.60 | 45.0 | 4.26e-01 | 100.0% | 66.3% |
| 4956413 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.60 | 56.0 | 5.04e-01 | 100.0% | 99.5% |
| 5054171 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.59 | 55.0 | 4.99e-01 | 100.0% | 99.5% |
| 4321817 | 2003.1.10.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › PF27100 | 0.59 | 31.0 | 4.07e-01 | 100.0% | 95.0% |
| 3328071 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.59 | 42.0 | 4.88e-01 | 76.4% | 100.0% |
| 3794522 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.58 | 50.0 | 5.16e-01 | 91.7% | 98.7% |
| 3878424 | 2007.1.6.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH | 0.58 | 38.0 | 4.02e-01 | 96.2% | 74.3% |
| 4433044 | 2488.1.1.7 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 | 0.57 | 53.0 | 4.70e-01 | 100.0% | 97.7% |
| 3960574 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.57 | 45.0 | 4.45e-01 | 88.5% | 79.4% |
D2
high
residues 174-245
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01746.27 best | tRNA_m1G_MT | 67.8 | 1.30e-18 | 79.2% | 25.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7myqB02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.99 | 73.0 | 8.44e-01 | 76.4% | 100.0% |
| 6qr4B02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.95 | 67.0 | 7.64e-01 | 73.6% | 94.6% |
| 1uajA02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.88 | 79.0 | 7.93e-01 | 98.6% | 94.5% |
| 5hy0D03 | 3.30.1330.160 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbituras, RU C | 0.54 | 41.0 | 3.58e-01 | 83.3% | 67.0% |
| 6ksrA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 43.0 | 3.43e-01 | 95.8% | 82.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3386828 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.98 | 76.0 | 5.09e-01 | 80.6% | 27.0% |
| 3959157 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.97 | 75.0 | 5.96e-01 | 79.2% | 48.0% |
| 4286781 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.97 | 78.0 | 5.19e-01 | 83.3% | 26.1% |
| 4270738 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.91 | 60.0 | 4.08e-01 | 73.6% | 21.8% |
| 4286524 | 2488.1.1.22 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT, Methyltrn_RNA_4 | 0.90 | 84.0 | 5.02e-01 | 100.0% | 16.7% |
| 3966608 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.90 | 84.0 | 5.59e-01 | 100.0% | 29.0% |
| 4036409 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.90 | 86.0 | 5.56e-01 | 100.0% | 28.7% |
| 3067438 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.89 | 84.0 | 5.56e-01 | 100.0% | 29.4% |
| 4164317 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.88 | 83.0 | 5.43e-01 | 100.0% | 30.1% |
| 4611481 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.87 | 83.0 | 5.41e-01 | 100.0% | 27.2% |
| 4291293 | 2488.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT | 0.84 | 79.0 | 5.27e-01 | 100.0% | 32.8% |
| 3785008 | 3324.1.1.0 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.55 | 42.0 | 3.48e-01 | 80.6% | 63.2% |