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CAKLQF020000004.1__CAH1076845.1__SAMEA5780031_01055__00149
Bact-VirCAKLQF020000004.1__CAH1076845.1__SAMEA5780031_01055__00149
Identity
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07963.18 best | N_methyl | 33.0 | 4.40e-08 | 42.4% | 85.2% |
D2
medium
residues 60-141
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hz7A01 | 3.30.700.50 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.65 | 58.0 | 5.13e-01 | 96.3% | 76.3% |
| 1jrrA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.63 | 45.0 | 3.91e-01 | 74.4% | 77.0% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 44.0 | 3.16e-01 | 78.0% | 61.4% |
| 1jmoA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 47.0 | 3.80e-01 | 82.9% | 98.0% |
| 1imvA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 48.0 | 3.75e-01 | 85.4% | 88.8% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.60 | 43.0 | 4.36e-01 | 74.4% | 81.0% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.59 | 47.0 | 4.31e-01 | 96.3% | 65.7% |
| 1nw1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 47.0 | 4.48e-01 | 87.8% | 93.8% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 50.0 | 3.92e-01 | 96.3% | 54.2% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.57 | 48.0 | 3.80e-01 | 92.7% | 50.9% |
| 3gwiA00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.57 | 47.0 | 3.85e-01 | 93.9% | 76.2% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 49.0 | 4.05e-01 | 100.0% | 69.9% |
| 1a2pA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.56 | 44.0 | 4.03e-01 | 85.4% | 85.2% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 39.0 | 3.65e-01 | 75.6% | 62.6% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 49.0 | 3.93e-01 | 100.0% | 72.0% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 48.0 | 4.06e-01 | 97.6% | 94.9% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 46.0 | 3.91e-01 | 98.8% | 75.7% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.54 | 46.0 | 4.04e-01 | 96.3% | 71.5% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.53 | 44.0 | 4.05e-01 | 93.9% | 79.3% |
| 3ub1D02 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.92e-01 | 92.7% | 97.4% |
| 1ej8A00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.52 | 44.0 | 3.71e-01 | 93.9% | 83.6% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 36.0 | 3.12e-01 | 73.2% | 44.4% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.52 | 44.0 | 3.29e-01 | 97.6% | 87.6% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.52 | 42.0 | 3.14e-01 | 92.7% | 87.6% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.51 | 42.0 | 3.79e-01 | 91.5% | 88.0% |
| 5x7qA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.51 | 43.0 | 3.20e-01 | 95.1% | 100.0% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 42.0 | 2.90e-01 | 97.6% | 45.6% |
| 1o7dD01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.51 | 41.0 | 2.97e-01 | 91.5% | 90.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963807 | 274.1.1.14 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComP_DUS | 0.77 | 57.0 | 5.05e-01 | 100.0% | 55.7% |
| 3962855 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.66 | 45.0 | 4.04e-01 | 70.7% | 52.2% |
| 3056895 | 71.1.1.7 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 | 0.66 | 45.0 | 3.42e-01 | 79.3% | 30.5% |
| 2128123 | 913.1.1.2 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › ComP_DUS | 0.65 | 58.0 | 5.14e-01 | 98.8% | 74.8% |
| 3947165 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.63 | 50.0 | 4.05e-01 | 84.1% | 70.7% |
| 3431175 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 49.0 | 4.60e-01 | 91.5% | 100.0% |
| 5046573 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.58 | 51.0 | 4.03e-01 | 93.9% | 51.9% |
| 3945059 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.58 | 41.0 | 3.82e-01 | 74.4% | 61.9% |
| 3459135 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.58 | 39.0 | 3.61e-01 | 70.7% | 98.2% |
| 3258377 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.57 | 46.0 | 4.53e-01 | 97.6% | 78.9% |
| 3788663 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 49.0 | 3.48e-01 | 93.9% | 77.6% |
| 3739782 | 9.2.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › FBO_C | 0.57 | 49.0 | 4.06e-01 | 98.8% | 91.0% |
| 2427472 | 4.1.1.11 ↗ | beta barrels › SH3 › SH3 › SH3 › RNB | 0.57 | 47.0 | 2.96e-01 | 90.2% | 53.2% |
| 2337287 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.57 | 47.0 | 2.95e-01 | 90.2% | 53.0% |
| 3303863 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.56 | 48.0 | 3.22e-01 | 96.3% | 53.6% |
| 450 | 2.9.1.0 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like | 0.56 | 47.0 | 3.01e-01 | 92.7% | 48.6% |
| 3398765 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.56 | 48.0 | 3.49e-01 | 100.0% | 98.8% |
| 3171592 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.56 | 47.0 | 2.98e-01 | 92.7% | 49.6% |
| 3964869 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.55 | 44.0 | 4.03e-01 | 84.1% | 72.4% |
| 3964735 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.55 | 47.0 | 2.98e-01 | 92.7% | 52.2% |
| 4537989 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.55 | 46.0 | 3.24e-01 | 92.7% | 90.0% |
| 147479 | 234.1.1.1 ↗ | a+b two layers › Microbial ribonucleases-like › Microbial ribonucleases › Microbial ribonucleases › Ribonuclease | 0.55 | 38.0 | 3.46e-01 | 70.7% | 72.7% |
| 4279957 | 234.1.1.1 ↗ | a+b two layers › Microbial ribonucleases-like › Microbial ribonucleases › Microbial ribonucleases › Ribonuclease | 0.54 | 42.0 | 3.90e-01 | 84.1% | 85.7% |
| 4034136 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.54 | 46.0 | 3.20e-01 | 97.6% | 35.3% |
| 3606556 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 45.0 | 2.68e-01 | 97.6% | 17.8% |
| 3415319 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.54 | 41.0 | 3.10e-01 | 82.9% | 44.4% |
| 865437 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.53 | 44.0 | 3.66e-01 | 92.7% | 76.2% |
| 4929578 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 44.0 | 3.88e-01 | 91.5% | 69.2% |
| 3714469 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.52 | 44.0 | 2.67e-01 | 95.1% | 29.3% |
| 3787121 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.52 | 47.0 | 4.09e-01 | 100.0% | 94.4% |
| 3527733 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.52 | 40.0 | 3.05e-01 | 84.1% | 45.5% |
| 3725589 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.51 | 43.0 | 3.46e-01 | 96.3% | 69.4% |
| 3704313 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.50 | 39.0 | 3.42e-01 | 82.9% | 87.2% |
| 3616043 | 216.1.1.19 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med14_RM6 | 0.50 | 45.0 | 3.69e-01 | 100.0% | 65.3% |