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CAKLQF020000004.1__CAH1076847.1__SAMEA5780031_01056__00150

Bact-Vir

CAKLQF020000004.1__CAH1076847.1__SAMEA5780031_01056__00150

Identity

Kingdom:
phage

Quality

89.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-158
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2opeA00 3.30.540.20 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › 0.69 64.0 6.23e-01 100.0% 91.7%
5hz7A01 3.30.700.50 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.68 61.0 6.06e-01 100.0% 92.1%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.55 39.0 3.50e-01 71.8% 73.3%
3ubhA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.55 38.0 3.98e-01 71.8% 94.9%
2jobA00 3.30.160.320 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 33.0 3.48e-01 78.2% 69.6%
1ql0A00 3.40.570.10 Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A 0.51 41.0 3.24e-01 87.3% 69.3%
1w7cA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 33.0 3.26e-01 71.8% 61.7%
2bhvB01 2.40.128.260 Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI 0.51 36.0 3.27e-01 75.5% 90.1%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1885949 274.1.1.16 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › PilA4 0.72 51.0 5.67e-01 100.0% 93.0%
3965060 274.1.1.11 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pilin_PilX 0.70 65.0 5.80e-01 100.0% 73.3%
2128123 913.1.1.2 ↗ few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › ComP_DUS 0.68 61.0 5.97e-01 100.0% 89.1%
4479763 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.58 41.0 4.44e-01 72.7% 85.3%
3990414 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.58 40.0 3.76e-01 71.8% 78.6%
3271908 210.2.1.0 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.56 42.0 3.12e-01 77.3% 65.1%
4512840 247.1.1.34 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › MBL_MAP1B 0.55 50.0 3.54e-01 100.0% 84.7%
4014269 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 40.0 2.73e-01 80.0% 33.6%
5049920 216.1.1.1 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.53 38.0 3.41e-01 75.5% 70.0%
4681809 210.1.2.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Peptidase_C69 0.52 43.0 2.96e-01 92.7% 35.4%
3359635 274.1.1.44 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF7804 0.52 42.0 4.23e-01 88.2% 91.8%
137904 642.1.1.1 ↗ a+b three layers › Suppressor of Fused, N-terminal domain › Suppressor of Fused, N-terminal domain › Suppressor of Fused, N-terminal domain › SUFU 0.51 43.0 3.67e-01 90.9% 77.5%
5054107 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.51 42.0 3.27e-01 90.9% 41.6%
3614346 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.50 37.0 2.37e-01 77.3% 54.2%