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CAKLQF020000004.1__CAH1076873.1__SAMEA5780031_01069__00163

Bact-Vir

CAKLQF020000004.1__CAH1076873.1__SAMEA5780031_01069__00163

Identity

Kingdom:
phage

Quality

92.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 464-540
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3as5A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 68.0 5.14e-01 96.1% 53.9%
1zbpA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 62.0 5.99e-01 88.3% 87.1%
8g0lB01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.74 64.0 4.04e-01 94.8% 21.3%
4y6cA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 66.0 4.76e-01 98.7% 51.4%
5tqbB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 66.0 4.30e-01 100.0% 53.9%
7yb9A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 66.0 4.74e-01 100.0% 54.6%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 65.0 5.55e-01 98.7% 90.3%
3nnbA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.73 64.0 4.06e-01 97.4% 39.4%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 62.0 5.72e-01 96.1% 93.1%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 62.0 4.90e-01 96.1% 50.9%
3vtxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 64.0 4.86e-01 100.0% 60.7%
4rg9B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 62.0 4.81e-01 96.1% 56.3%
4j8dD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 62.0 4.89e-01 98.7% 64.8%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 62.0 5.00e-01 98.7% 71.5%
3gz1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 62.0 5.03e-01 98.7% 58.3%
2xpiD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 61.0 3.69e-01 97.4% 17.8%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 60.0 5.40e-01 94.8% 75.2%
4ui9Y03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.69 61.0 6.07e-01 98.7% 100.0%
3ly7A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.69 60.0 4.81e-01 100.0% 50.9%
5nnpE01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.68 59.0 3.65e-01 97.4% 19.1%
2hr2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.68 60.0 4.81e-01 100.0% 87.8%
7cc7A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 59.0 4.31e-01 100.0% 67.4%
2pziB03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 57.0 4.64e-01 96.1% 54.0%
7tj4A01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 57.0 4.97e-01 97.4% 72.5%
4in3B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 56.0 3.37e-01 100.0% 29.5%
4g1tA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 48.0 4.19e-01 85.7% 66.7%
1q2zA00 1.25.40.240 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain 0.62 52.0 4.56e-01 94.8% 79.2%
3l9tA01 1.10.1240.70 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.61 49.0 4.85e-01 90.9% 100.0%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3830882 109.4.1.1273 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.78 71.0 4.29e-01 100.0% 22.2%
3415439 109.4.1.1264 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 0.76 68.0 4.18e-01 97.4% 19.3%
3500009 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 68.0 5.25e-01 98.7% 48.5%
3367062 109.4.1.1331 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif 0.76 63.0 4.17e-01 89.6% 26.2%
3683266 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.75 67.0 4.88e-01 97.4% 38.5%
3645625 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.75 68.0 4.80e-01 100.0% 47.8%
4419941 109.4.1.3070 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_4, TPR_7, TPR_8, TPR_16, TPR_19 0.75 65.0 3.96e-01 96.1% 16.3%
3364476 109.4.1.1779 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_3 0.75 67.0 4.72e-01 100.0% 41.7%
3381954 109.4.1.1610 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, E_motif 0.74 68.0 3.96e-01 100.0% 18.9%
3934886 109.4.1.1329 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31234 0.74 67.0 3.79e-01 100.0% 60.5%
3679150 109.4.1.1285 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.74 67.0 4.03e-01 100.0% 22.8%
3833112 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.73 66.0 4.51e-01 100.0% 41.1%
3376952 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.73 66.0 4.96e-01 100.0% 62.2%
3502787 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 59.0 5.03e-01 88.3% 58.4%
2326858 109.4.1.200 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 0.73 58.0 5.01e-01 88.3% 55.9%
3809962 109.4.1.1275 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 0.72 65.0 3.89e-01 100.0% 21.9%
3166807 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 63.0 4.70e-01 94.8% 43.2%
3833235 109.4.1.1271 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.72 65.0 3.74e-01 100.0% 15.2%
3966682 109.4.1.1357 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_16 0.72 65.0 4.69e-01 100.0% 37.7%
3453496 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.72 66.0 4.08e-01 100.0% 26.7%
3592328 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 64.0 4.38e-01 100.0% 45.1%
3333276 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.72 66.0 4.77e-01 100.0% 59.5%
3671232 109.4.1.1610 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, E_motif 0.72 65.0 4.30e-01 100.0% 36.5%
3366471 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.71 61.0 4.42e-01 94.8% 38.5%
3810047 109.4.1.775 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 62.0 5.50e-01 94.8% 74.5%
2814209 109.4.1.1294 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, ANAPC3, TPR_8, TPR_12, TPR_16 0.71 62.0 4.75e-01 96.1% 53.7%
3378605 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.71 65.0 4.17e-01 100.0% 34.1%
3813356 109.4.1.1279 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.71 64.0 3.66e-01 100.0% 14.9%
3336696 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.71 65.0 3.89e-01 100.0% 22.4%
3354769 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.71 63.0 4.62e-01 98.7% 42.0%
3717883 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 63.0 4.42e-01 100.0% 40.8%
4016217 109.4.1.30 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.70 62.0 3.84e-01 100.0% 23.2%
3381254 109.4.1.2593 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, Eplus_motif 0.70 62.0 4.16e-01 98.7% 29.5%
3610731 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 62.0 5.46e-01 100.0% 98.3%
4580548 109.4.1.211 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19,TPR_20 0.70 61.0 4.45e-01 97.4% 37.2%
3360250 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.70 62.0 5.13e-01 100.0% 60.7%
3344459 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.70 62.0 3.75e-01 100.0% 21.7%
3683655 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.70 64.0 5.14e-01 100.0% 81.9%
3420078 109.4.1.1267 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.70 62.0 3.62e-01 100.0% 17.5%
3808018 109.4.1.1275 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 0.70 62.0 4.05e-01 100.0% 41.4%
3306695 109.4.1.2938 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, PPR_3, E_motif 0.70 62.0 4.44e-01 100.0% 36.5%
3522764 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 63.0 4.47e-01 100.0% 71.1%
3813988 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.70 61.0 4.20e-01 100.0% 40.0%
3411207 109.4.1.30 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.69 61.0 3.78e-01 100.0% 21.7%
3664498 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.69 63.0 4.44e-01 100.0% 51.7%
3442732 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.69 61.0 5.16e-01 98.7% 67.7%
3347296 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 62.0 4.45e-01 100.0% 52.0%
3821634 109.4.1.1335 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.69 61.0 4.52e-01 100.0% 54.6%
3360861 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 63.0 4.19e-01 100.0% 37.9%
3805406 109.4.1.1331 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif 0.69 61.0 4.79e-01 100.0% 55.2%
3590183 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 60.0 5.25e-01 100.0% 67.5%
3480475 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 61.0 4.48e-01 100.0% 50.0%
1115536 109.4.1.1276 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT, HEAT_ATR 0.68 61.0 3.80e-01 100.0% 29.3%
3469461 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.68 61.0 4.03e-01 100.0% 36.5%
3467097 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.68 60.0 3.85e-01 100.0% 30.5%
3351154 5.1.3.208 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Utp13 0.68 50.0 5.05e-01 77.9% 80.0%
3257610 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 58.0 4.56e-01 97.4% 79.4%
3383670 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.67 59.0 4.72e-01 98.7% 52.9%
3203002 109.4.1.2832 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › mTOR_dom, HEAT_EZ, TPR_IMB1 0.67 58.0 3.19e-01 100.0% 11.3%
4649278 109.4.1.1375 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_SYVN1_N 0.63 50.0 3.55e-01 89.6% 55.5%
5026542 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.62 44.0 3.12e-01 76.6% 57.8%
4947955 4163.1.1.0 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.56 42.0 3.83e-01 81.8% 87.3%
D2 medium residues 123-134_150-277_359-380
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF15864.11 best PglL_A 30.2 4.50e-07 16.1% 96.2%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.64 27.0 3.85e-01 73.5% 80.2%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 32.0 4.24e-01 84.0% 92.4%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 32.0 3.95e-01 83.3% 83.5%
3tdoA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.56 41.0 3.55e-01 74.1% 96.1%
2e9xD01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 34.0 3.67e-01 99.4% 70.8%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.55 35.0 3.89e-01 92.6% 80.5%
5gmkZ01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 47.0 4.23e-01 96.3% 92.2%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.53 35.0 4.01e-01 92.0% 90.0%
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.52 40.0 3.96e-01 78.4% 98.8%
4aezI01 1.25.40.430 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 31.0 3.01e-01 82.1% 48.4%
2np9A01 1.20.58.1300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 37.0 4.04e-01 73.5% 94.8%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.51 32.0 3.83e-01 81.5% 89.5%
2dnxA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 33.0 3.64e-01 86.4% 80.8%
1cnt200 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 35.0 3.83e-01 90.7% 86.9%
4od4A01 1.10.357.140 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase 0.51 42.0 4.27e-01 100.0% 89.7%
3juiA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 39.0 3.89e-01 90.1% 76.4%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4301705 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.96 94.0 6.37e-01 100.0% 54.7%
4524855 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.87 84.0 6.08e-01 100.0% 63.3%
3964019 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.85 81.0 5.77e-01 100.0% 56.5%
4363487 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.74 28.0 3.55e-01 75.9% 58.0%
4223425 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.73 28.0 3.47e-01 76.5% 56.2%
4060910 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.69 28.0 3.49e-01 79.0% 60.0%
3297770 622.4.1.26 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA 0.68 29.0 4.08e-01 79.0% 78.8%
3370743 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.68 29.0 4.21e-01 79.0% 83.7%
4960823 3352.1.1.2 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 0.64 55.0 4.20e-01 92.6% 73.6%
4949585 3352.1.1.49 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DUF2206 0.61 53.0 3.80e-01 92.6% 63.4%
5039649 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 29.0 3.34e-01 79.0% 65.8%
3601984 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.57 40.0 4.49e-01 95.7% 95.0%
3597674 5082.1.1.0 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like 0.57 40.0 3.51e-01 70.4% 68.5%
3723402 3352.1.1.4 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Alg6_Alg8 0.57 50.0 3.49e-01 96.9% 55.7%
3761039 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.56 42.0 3.70e-01 79.0% 76.7%
4609538 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.56 34.0 3.91e-01 92.6% 83.5%
3448339 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.56 34.0 3.57e-01 86.4% 66.9%
3250955 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.55 24.0 2.03e-01 79.0% 22.5%
3472576 109.4.1.1504 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26103 0.54 44.0 3.03e-01 86.4% 36.4%
3921501 5082.1.1.1 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.53 38.0 3.47e-01 74.1% 64.1%
3935599 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.53 38.0 3.59e-01 95.7% 60.5%
3174257 109.4.1.596 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF5355 0.52 40.0 3.06e-01 79.0% 89.1%
3221474 5082.1.1.1 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.52 37.0 3.41e-01 74.1% 72.1%
4929490 621.1.1.0 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.51 27.0 3.35e-01 77.2% 84.2%
3523472 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.51 41.0 3.68e-01 98.1% 61.8%
D3 medium residues 278-358
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04932.21 best Wzy_C 42.4 8.50e-11 82.7% 43.6%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.07e-01 70.4% 78.6%
3dewA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 38.0 4.43e-01 79.0% 96.2%
2ph7A01 1.10.3400.10 Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like 0.61 44.0 3.87e-01 77.8% 62.9%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 4.19e-01 80.2% 75.7%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.61 41.0 4.54e-01 70.4% 98.3%
1d8jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.44e-01 80.2% 90.1%
1w2mA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.58 50.0 3.58e-01 100.0% 57.1%
3ig4A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.58 50.0 3.61e-01 100.0% 60.1%
2zsgA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.57 49.0 3.66e-01 100.0% 60.5%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 4.02e-01 76.5% 85.1%
6mrfA00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.56 48.0 3.50e-01 98.8% 59.1%
1na6B02 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.56 48.0 3.58e-01 97.5% 54.3%
5ce6A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.56 48.0 3.47e-01 100.0% 60.7%
4r60A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.56 48.0 3.57e-01 100.0% 60.0%
4zjpA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 35.0 2.92e-01 71.6% 36.1%
4s2rQ03 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.56 49.0 3.37e-01 100.0% 71.4%
3vibA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 47.0 3.69e-01 98.8% 67.4%
1qxyA00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.55 47.0 3.42e-01 97.5% 58.2%
4d53A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.55 39.0 3.39e-01 91.4% 45.9%
2f07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 45.0 3.47e-01 91.4% 56.6%
4cgrB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 47.0 3.67e-01 100.0% 95.8%
4km3B00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.55 47.0 3.31e-01 98.8% 63.5%
1wn1A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.55 47.0 3.50e-01 100.0% 62.1%
3ppbA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 46.0 3.59e-01 96.3% 69.1%
2q8kA01 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.54 48.0 3.30e-01 100.0% 65.0%
2zcxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 47.0 3.58e-01 100.0% 69.8%
2k4jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.46e-01 74.1% 81.0%
1z21A00 1.10.10.1000 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain 0.53 36.0 3.47e-01 71.6% 64.6%
1xgsA01 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.52 45.0 3.39e-01 100.0% 77.1%
4z7xB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 38.0 2.91e-01 79.0% 76.4%
1q8cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.52 42.0 3.67e-01 92.6% 96.2%
3t6aA00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.51 38.0 2.64e-01 81.5% 71.4%
1chmA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.51 43.0 3.15e-01 100.0% 61.4%
3tavA00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.50 41.0 2.98e-01 95.1% 83.0%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4301705 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.98 94.0 5.59e-01 100.0% 17.2%
4524855 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.94 90.0 5.50e-01 100.0% 21.0%
5083675 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.85 78.0 4.90e-01 100.0% 21.0%
3164267 3352.1.1.39 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Wzy_C 0.81 74.0 4.74e-01 100.0% 26.7%
4010449 7011.1.1.0 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain 0.79 71.0 4.56e-01 100.0% 23.8%
3989196 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.75 68.0 4.40e-01 100.0% 23.9%
3987661 7011.1.1.6 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.75 67.0 4.52e-01 100.0% 29.3%
3386319 503.1.1.0 extended segments › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein 0.73 35.0 3.24e-01 91.4% 35.0%
4028668 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.99e-01 74.1% 100.0%
5041402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 5.11e-01 81.5% 93.8%
2983210 6004.1.1.2 extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 0.64 34.0 3.03e-01 93.8% 34.7%
4967393 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 45.0 4.81e-01 75.3% 100.0%
3987997 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 45.0 4.67e-01 74.1% 100.0%
3927517 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 46.0 4.31e-01 76.5% 81.0%
None 0.62 45.0 4.23e-01 76.5% 80.0%
3625612 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 45.0 4.29e-01 77.8% 81.0%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 45.0 3.97e-01 76.5% 69.2%
4974161 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 45.0 3.93e-01 76.5% 65.3%
1519214 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 45.0 4.18e-01 76.5% 79.4%
5049515 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 45.0 4.06e-01 77.8% 73.0%
5065308 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 46.0 4.10e-01 80.2% 72.5%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 44.0 4.03e-01 77.8% 77.3%
3966563 283.1.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.58 50.0 3.57e-01 100.0% 56.3%
3214449 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.58 43.0 4.33e-01 82.7% 80.0%
5031480 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.58 49.0 3.56e-01 98.8% 62.7%
3427512 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.57 41.0 4.43e-01 81.5% 95.4%
4962371 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.57 47.0 3.32e-01 91.4% 41.3%
3961167 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.57 49.0 3.58e-01 100.0% 62.1%
4945377 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.56 49.0 3.59e-01 100.0% 60.0%
3595249 283.1.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.56 49.0 3.40e-01 100.0% 91.0%
3959950 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.56 46.0 3.62e-01 97.5% 78.5%
5046771 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.56 47.0 3.46e-01 98.8% 58.6%
4978327 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.55 48.0 3.53e-01 100.0% 59.1%
5057440 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.55 45.0 3.45e-01 96.3% 64.4%
5078156 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.55 46.0 3.45e-01 98.8% 59.7%
4033934 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.55 46.0 3.33e-01 96.3% 58.8%
3588927 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.55 46.0 3.46e-01 100.0% 60.4%
3669609 192.29.1.114 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Mitofilin 0.54 43.0 3.36e-01 86.4% 40.6%
4945750 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.53 46.0 3.37e-01 100.0% 60.8%
4316615 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.52 42.0 3.05e-01 90.1% 81.6%
3409435 101.1.10.22 alpha arrays › HTH › HTH › Cyclin-like › ORC6 0.52 35.0 3.36e-01 81.5% 58.9%
4617843 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.52 42.0 3.10e-01 92.6% 67.5%
4939757 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.52 43.0 3.13e-01 97.5% 64.6%
4962523 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.51 42.0 3.00e-01 91.4% 81.2%
144289 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.50 41.0 2.98e-01 95.1% 83.3%