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CAKLQF020000004.1__CAH1076905.1__SAMEA5780031_01085__00179
Bact-VirCAKLQF020000004.1__CAH1076905.1__SAMEA5780031_01085__00179
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 54-72_262-317
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oluA01 | 3.90.1310.20 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › | 0.68 | 48.0 | 4.36e-01 | 73.3% | 71.7% |
| 2ii3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 40.0 | 2.82e-01 | 80.0% | 46.4% |
D2
medium
residues 73-103_163-261
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00136__D312-335_414-536
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00912.29 best | Transgly | 85.2 | 5.30e-24 | 57.7% | 41.0% |
| PF00912.29 | Transgly | 27.3 | 3.20e-06 | 25.4% | 16.3% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oqoA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.99 | 90.0 | 7.83e-01 | 93.1% | 96.1% |
| 2olvB02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.96 | 93.0 | 7.91e-01 | 100.0% | 98.9% |
| 3hzsA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.94 | 86.0 | 7.07e-01 | 94.6% | 90.0% |
| 5fgzA02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.87 | 79.0 | 7.17e-01 | 93.1% | 93.3% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.57 | 35.0 | 3.74e-01 | 89.2% | 70.2% |
| 1j3eA00 | 1.20.1380.10 | Mainly Alpha › Up-down Bundle › Replication modulator SeqA, C-terminal DNA-binding domain › Replication modulator SeqA, C-terminal DNA-binding domain | 0.50 | 32.0 | 3.42e-01 | 89.2% | 72.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4044894 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.99 | 95.0 | 7.26e-01 | 98.5% | 73.3% |
| 4319405 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.98 | 93.0 | 7.38e-01 | 96.2% | 81.8% |
| 4217977 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.98 | 93.0 | 7.03e-01 | 97.7% | 71.7% |
| 3987240 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.97 | 92.0 | 7.07e-01 | 97.7% | 74.1% |
| 4669149 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.97 | 91.0 | 7.26e-01 | 96.2% | 81.8% |
| 4033682 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.96 | 94.0 | 7.33e-01 | 100.0% | 79.2% |
| 4179241 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.96 | 93.0 | 5.85e-01 | 100.0% | 36.1% |
| 3839655 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.96 | 93.0 | 7.19e-01 | 100.0% | 75.6% |
| 4660292 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.96 | 93.0 | 7.04e-01 | 100.0% | 78.1% |
| 3980915 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.96 | 91.0 | 7.10e-01 | 98.5% | 75.9% |
| 4034309 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.96 | 91.0 | 6.78e-01 | 97.7% | 72.7% |
| 3588448 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 93.0 | 6.84e-01 | 100.0% | 67.4% |
| 3949767 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 92.0 | 6.90e-01 | 100.0% | 73.8% |
| 1122242 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 71.0 | 8.05e-01 | 81.5% | 98.0% |
| 3987246 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.94 | 91.0 | 6.82e-01 | 100.0% | 74.5% |
| 4584589 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.94 | 91.0 | 6.94e-01 | 100.0% | 74.6% |
| 149435 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.94 | 87.0 | 6.97e-01 | 95.4% | 82.1% |
| 4165534 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.93 | 86.0 | 6.86e-01 | 94.6% | 83.6% |
| 4173279 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.93 | 76.0 | 5.98e-01 | 84.6% | 70.4% |
| 3959807 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.92 | 67.0 | 7.72e-01 | 74.6% | 98.0% |
| 3971996 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.91 | 75.0 | 6.09e-01 | 84.6% | 76.4% |
| 4108282 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 73.0 | 5.79e-01 | 83.8% | 72.8% |
| 3969665 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 85.0 | 6.49e-01 | 100.0% | 84.4% |
| 4052832 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 73.0 | 5.87e-01 | 83.8% | 74.2% |
| 4107494 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.89 | 72.0 | 6.00e-01 | 83.8% | 79.5% |
| 4390460 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.87 | 71.0 | 5.93e-01 | 83.8% | 73.2% |
| 3894715 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.51 | 42.0 | 3.40e-01 | 89.2% | 78.5% |
D3
medium
residues 104-162
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00912.29 best | Transgly | 63.7 | 2.10e-17 | 100.0% | 32.6% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 41.0 | 3.37e-01 | 88.1% | 36.3% |
| 1rypK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.63 | 54.0 | 3.83e-01 | 100.0% | 79.3% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.63 | 43.0 | 3.76e-01 | 96.6% | 48.8% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 39.0 | 3.50e-01 | 98.3% | 56.0% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.52 | 39.0 | 3.54e-01 | 83.1% | 95.3% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 46.0 | 3.88e-01 | 100.0% | 96.0% |
| 4n4gA01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 40.0 | 3.29e-01 | 100.0% | 45.0% |
| 3pm6A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 42.0 | 2.76e-01 | 91.5% | 43.6% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.52 | 42.0 | 3.55e-01 | 98.3% | 95.6% |
| 1v9mA03 | 1.20.1690.10 | Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain | 0.52 | 44.0 | 3.82e-01 | 98.3% | 84.4% |
| 4ywoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 44.0 | 3.03e-01 | 96.6% | 82.1% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 33.0 | 3.36e-01 | 94.9% | 69.6% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.51 | 34.0 | 3.46e-01 | 94.9% | 68.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4044894 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.96 | 92.0 | 5.76e-01 | 100.0% | 23.1% |
| 4319405 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 90.0 | 5.81e-01 | 100.0% | 26.2% |
| 3588448 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 91.0 | 5.55e-01 | 100.0% | 21.1% |
| 4179241 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.94 | 89.0 | 4.99e-01 | 100.0% | 10.8% |
| 4669149 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.93 | 87.0 | 5.64e-01 | 100.0% | 26.2% |
| 3971996 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.92 | 84.0 | 5.50e-01 | 100.0% | 26.4% |
| 4217977 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 86.0 | 5.36e-01 | 100.0% | 22.3% |
| 4108282 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 85.0 | 5.44e-01 | 100.0% | 26.8% |
| 4173279 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 84.0 | 5.39e-01 | 100.0% | 24.6% |
| 4107494 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.86 | 78.0 | 5.17e-01 | 100.0% | 27.6% |
| 3708446 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 40.0 | 3.55e-01 | 94.9% | 44.7% |
| 3688761 | 3755.3.1.288 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › LMBR1 | 0.58 | 40.0 | 3.05e-01 | 71.2% | 43.0% |
| 3243299 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.57 | 39.0 | 3.71e-01 | 94.9% | 61.4% |
| 3652921 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.53 | 41.0 | 2.79e-01 | 98.3% | 21.3% |
| 3205239 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.52 | 42.0 | 4.01e-01 | 94.9% | 78.7% |
D4
medium
residues 318-420
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17092.12 best | PCB_OB | 82.9 | 3.80e-23 | 98.1% | 84.7% |
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.99 | 90.0 | 9.39e-01 | 92.2% | 100.0% |
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.96 | 86.0 | 8.66e-01 | 93.2% | 100.0% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.85 | 46.0 | 5.98e-01 | 74.8% | 91.8% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.83 | 46.0 | 6.06e-01 | 74.8% | 96.6% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 47.0 | 5.92e-01 | 74.8% | 95.3% |
| 3d0fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 55.0 | 6.50e-01 | 76.7% | 100.0% |
| 1u0lA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 46.0 | 5.80e-01 | 74.8% | 96.9% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 50.0 | 5.69e-01 | 78.6% | 86.1% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.76 | 46.0 | 5.30e-01 | 74.8% | 80.8% |
| 1k3rA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 40.0 | 5.18e-01 | 74.8% | 93.2% |
| 5lm7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 46.0 | 5.33e-01 | 73.8% | 84.6% |
| 1d7qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 50.0 | 4.40e-01 | 91.3% | 49.7% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 48.0 | 5.65e-01 | 76.7% | 93.2% |
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 54.0 | 5.85e-01 | 76.7% | 89.9% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 46.0 | 5.33e-01 | 74.8% | 87.8% |
| 2cqoA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 54.0 | 5.74e-01 | 76.7% | 88.0% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 52.0 | 5.50e-01 | 72.8% | 100.0% |
| 2mfiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 42.0 | 4.33e-01 | 70.9% | 60.4% |
| 2ba0A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 52.0 | 5.63e-01 | 75.7% | 87.4% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 43.0 | 5.27e-01 | 96.1% | 92.5% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 46.0 | 5.44e-01 | 74.8% | 93.1% |
| 2id0A04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 52.0 | 5.66e-01 | 74.8% | 96.6% |
| 6az1E02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.72 | 36.0 | 5.02e-01 | 72.8% | 100.0% |
| 3psiA06 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 53.0 | 5.39e-01 | 78.6% | 79.0% |
| 3m7nA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 53.0 | 5.75e-01 | 76.7% | 91.9% |
| 3oyyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 44.0 | 5.30e-01 | 77.7% | 98.5% |
| 2id0A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 42.0 | 4.68e-01 | 76.7% | 76.9% |
| 3bzcA05 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 52.0 | 5.44e-01 | 77.7% | 86.5% |
| 4ifdI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 54.0 | 4.73e-01 | 80.6% | 95.1% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 44.0 | 5.37e-01 | 73.8% | 100.0% |
| 3k0yA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.69 | 42.0 | 5.17e-01 | 75.7% | 98.5% |
| 1smxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 53.0 | 5.71e-01 | 80.6% | 100.0% |
| 2nn6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 52.0 | 4.77e-01 | 79.6% | 67.4% |
| 2je6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 48.0 | 5.20e-01 | 76.7% | 86.4% |
| 4c3iG02 | 2.40.50.1060 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 47.0 | 4.23e-01 | 73.8% | 59.0% |
| 2khiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 45.0 | 4.71e-01 | 74.8% | 75.8% |
| 2rf4E02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 47.0 | 5.16e-01 | 72.8% | 100.0% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 40.0 | 4.83e-01 | 81.6% | 90.1% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 32.0 | 4.43e-01 | 90.3% | 96.0% |
| 1ml8A01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 23.0 | 3.90e-01 | 77.7% | 100.0% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 47.0 | 5.24e-01 | 97.1% | 96.2% |
| 2ja9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 47.0 | 5.19e-01 | 75.7% | 94.0% |
| 3tssA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 43.0 | 5.07e-01 | 72.8% | 98.6% |
| 1kl9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 43.0 | 4.99e-01 | 81.6% | 94.7% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.63 | 30.0 | 4.33e-01 | 88.3% | 100.0% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 47.0 | 5.29e-01 | 82.5% | 100.0% |
| 4gnxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 42.0 | 4.19e-01 | 78.6% | 68.5% |
| 2a6hC05 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 36.0 | 4.15e-01 | 96.1% | 82.7% |
| 3bdlA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 43.0 | 3.68e-01 | 76.7% | 64.5% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 30.0 | 4.00e-01 | 91.3% | 98.1% |
| 2auwA01 | 3.30.2020.10 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain | 0.57 | 39.0 | 4.31e-01 | 71.8% | 100.0% |
| 2khjA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 40.0 | 4.23e-01 | 77.7% | 84.3% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 32.0 | 4.04e-01 | 95.1% | 95.2% |
| 1vlaA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 24.0 | 3.48e-01 | 76.7% | 95.2% |
| 3qwuA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.55 | 44.0 | 3.70e-01 | 88.3% | 85.0% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.54 | 37.0 | 3.96e-01 | 72.8% | 81.1% |
| 3h8lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 37.0 | 2.93e-01 | 71.8% | 74.1% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 44.0 | 4.39e-01 | 97.1% | 86.8% |
| 2zutA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 25.0 | 3.17e-01 | 79.6% | 79.7% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1116809 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.99 | 91.0 | 9.46e-01 | 94.2% | 100.0% |
| 1291928 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.96 | 88.0 | 8.76e-01 | 95.1% | 100.0% |
| 4046580 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.95 | 88.0 | 8.41e-01 | 95.1% | 100.0% |
| 3943073 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.93 | 86.0 | 8.37e-01 | 95.1% | 100.0% |
| 4173356 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.84 | 75.0 | 7.81e-01 | 94.2% | 100.0% |
| 4536756 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.81 | 53.0 | 5.84e-01 | 73.8% | 81.2% |
| 1832945 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.79 | 55.0 | 5.53e-01 | 77.7% | 70.5% |
| 3435395 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.78 | 54.0 | 4.17e-01 | 76.7% | 35.6% |
| 3808583 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.77 | 53.0 | 5.73e-01 | 76.7% | 81.1% |
| 3217247 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 53.0 | 5.72e-01 | 77.7% | 81.1% |
| 4572080 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.77 | 55.0 | 6.00e-01 | 77.7% | 88.2% |
| 4314982 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.77 | 54.0 | 5.87e-01 | 77.7% | 87.1% |
| 4000399 | 2.1.1.274 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7930 | 0.77 | 54.0 | 6.32e-01 | 75.7% | 100.0% |
| 2759388 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 46.0 | 5.50e-01 | 74.8% | 88.7% |
| 3838487 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 53.0 | 5.67e-01 | 76.7% | 82.2% |
| 4682066 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 53.0 | 5.58e-01 | 77.7% | 79.6% |
| 3624793 | 2.1.1.274 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7930 | 0.76 | 55.0 | 6.17e-01 | 76.7% | 96.2% |
| 3957861 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 54.0 | 5.64e-01 | 79.6% | 80.0% |
| 4218294 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.75 | 53.0 | 5.65e-01 | 77.7% | 82.2% |
| 4828268 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.75 | 53.0 | 5.26e-01 | 75.7% | 69.8% |
| 4113537 | 2.1.1.327 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27401 | 0.75 | 46.0 | 5.64e-01 | 74.8% | 96.9% |
| 3916007 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 47.0 | 5.82e-01 | 74.8% | 100.0% |
| 3168186 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.75 | 51.0 | 5.80e-01 | 74.8% | 91.3% |
| 3744373 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.75 | 55.0 | 3.34e-01 | 78.6% | 14.1% |
| 5043225 | 2.1.1.107 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 | 0.75 | 52.0 | 5.72e-01 | 76.7% | 87.1% |
| 3335838 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.74 | 53.0 | 5.33e-01 | 76.7% | 72.4% |
| 3253114 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.74 | 53.0 | 5.79e-01 | 76.7% | 88.2% |
| 3367795 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.74 | 49.0 | 5.17e-01 | 72.8% | 73.7% |
| 4000398 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 52.0 | 4.19e-01 | 75.7% | 41.1% |
| 3510519 | 2.1.1.236 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29292 | 0.74 | 52.0 | 5.61e-01 | 75.7% | 83.3% |
| 3252915 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 53.0 | 5.41e-01 | 78.6% | 76.0% |
| 3383363 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.74 | 52.0 | 5.61e-01 | 72.8% | 91.1% |
| 3627655 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.74 | 52.0 | 5.58e-01 | 76.7% | 83.3% |
| 3744339 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.73 | 53.0 | 5.22e-01 | 78.6% | 70.0% |
| 4588738 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.73 | 53.0 | 5.85e-01 | 74.8% | 96.5% |
| 3989628 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.73 | 54.0 | 5.75e-01 | 78.6% | 86.7% |
| 3684966 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.73 | 53.0 | 5.42e-01 | 78.6% | 77.0% |
| 4232512 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.73 | 51.0 | 5.71e-01 | 78.6% | 90.4% |
| 3258976 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.73 | 49.0 | 4.95e-01 | 76.7% | 68.6% |
| 3181250 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.72 | 55.0 | 5.12e-01 | 78.6% | 64.8% |
| 4472040 | 2.1.1.107 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 | 0.72 | 52.0 | 5.82e-01 | 75.7% | 95.0% |
| 3514142 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 52.0 | 5.67e-01 | 76.7% | 89.4% |
| 4982310 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 52.0 | 5.52e-01 | 75.7% | 84.4% |
| 4995236 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.72 | 52.0 | 5.81e-01 | 75.7% | 95.0% |
| 3899838 | 2.1.1.226 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 | 0.72 | 53.0 | 5.32e-01 | 76.7% | 86.7% |
| 4943115 | 2.1.1.367 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › KH_6 | 0.72 | 51.0 | 5.63e-01 | 76.7% | 89.4% |
| 3561240 | 2.1.1.226 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 | 0.72 | 53.0 | 5.30e-01 | 76.7% | 86.7% |
| 3195689 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 49.0 | 5.14e-01 | 74.8% | 76.8% |
| 3387984 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 46.0 | 5.08e-01 | 76.7% | 80.0% |
| 4124147 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.71 | 54.0 | 5.31e-01 | 78.6% | 74.5% |
| 3744260 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.71 | 53.0 | 5.85e-01 | 77.7% | 98.8% |
| 4281568 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.71 | 53.0 | 5.27e-01 | 78.6% | 75.2% |
| 3309414 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 54.0 | 5.68e-01 | 79.6% | 90.5% |
| 5042600 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 51.0 | 5.57e-01 | 76.7% | 89.4% |
| 3691220 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 52.0 | 5.55e-01 | 78.6% | 86.7% |
| 3930534 | 2.1.1.246 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29071 | 0.71 | 52.0 | 5.47e-01 | 76.7% | 89.5% |
| 3629221 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 52.0 | 5.70e-01 | 78.6% | 91.8% |
| 3691200 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 49.0 | 4.86e-01 | 71.8% | 91.8% |
| 3700055 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 52.0 | 5.47e-01 | 76.7% | 92.6% |
| 3272443 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.70 | 54.0 | 5.08e-01 | 80.6% | 70.4% |
| 3485630 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.70 | 52.0 | 5.33e-01 | 76.7% | 96.0% |
| 5035719 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.70 | 51.0 | 5.59e-01 | 75.7% | 90.6% |
| 3785795 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.70 | 49.0 | 5.44e-01 | 74.8% | 91.3% |
| 3612341 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.70 | 52.0 | 5.43e-01 | 76.7% | 88.4% |
| 4002804 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 47.0 | 5.13e-01 | 76.7% | 82.4% |
| 4021136 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 52.0 | 5.41e-01 | 76.7% | 86.3% |
| 3617001 | 2.1.1.246 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29071 | 0.70 | 51.0 | 4.97e-01 | 76.7% | 80.0% |
| 4017905 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.70 | 49.0 | 5.35e-01 | 71.8% | 90.6% |
| 3403113 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 51.0 | 5.26e-01 | 76.7% | 92.0% |
| 3899848 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.69 | 48.0 | 5.02e-01 | 70.9% | 89.5% |
| 3514149 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 54.0 | 5.43e-01 | 81.6% | 83.8% |
| 3661229 | 2.1.1.226 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 | 0.69 | 52.0 | 5.45e-01 | 78.6% | 89.5% |
| 4983129 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.69 | 50.0 | 5.44e-01 | 76.7% | 90.6% |
| 3351656 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 53.0 | 5.26e-01 | 79.6% | 96.2% |
| 3501894 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.69 | 51.0 | 4.74e-01 | 76.7% | 92.0% |
| 3253124 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.68 | 50.0 | 4.89e-01 | 75.7% | 90.9% |
| 4541708 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.68 | 53.0 | 5.06e-01 | 81.6% | 72.2% |
| 24072 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.68 | 49.0 | 5.30e-01 | 76.7% | 87.5% |
| 3514140 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 50.0 | 4.91e-01 | 76.7% | 81.8% |
| 361 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.68 | 48.0 | 5.22e-01 | 76.7% | 87.4% |
| 3168191 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 46.0 | 5.21e-01 | 72.8% | 90.0% |
| 5000804 | 2.1.1.107 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 | 0.68 | 49.0 | 5.28e-01 | 75.7% | 87.8% |
| 3899847 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.67 | 55.0 | 5.60e-01 | 86.4% | 95.0% |
| 3185150 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.67 | 52.0 | 5.66e-01 | 80.6% | 98.8% |
| 3514143 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 49.0 | 4.95e-01 | 76.7% | 91.4% |
| 3530433 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.67 | 51.0 | 5.33e-01 | 79.6% | 90.5% |
| 3688443 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.65 | 47.0 | 4.65e-01 | 74.8% | 78.2% |
| 4029771 | 885.1.1.0 ↗ | a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain | 0.65 | 58.0 | 5.01e-01 | 96.1% | 74.8% |
| 3721144 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 54.0 | 4.30e-01 | 92.2% | 58.0% |
| 3275931 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.63 | 53.0 | 5.16e-01 | 89.3% | 86.1% |
| 3972890 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.62 | 46.0 | 4.23e-01 | 77.7% | 94.6% |
| 3970344 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.60 | 43.0 | 4.12e-01 | 74.8% | 100.0% |
| 3056242 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 43.0 | 4.09e-01 | 76.7% | 69.9% |
| 4832861 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 43.0 | 4.39e-01 | 82.5% | 86.3% |
D5
medium
residues 421-455_559-579_696-769
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udfA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.99 | 91.0 | 6.17e-01 | 93.1% | 77.6% |
| 5cxwA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.91 | 83.0 | 5.67e-01 | 93.8% | 80.6% |
| 2bg1A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.89 | 81.0 | 5.91e-01 | 94.6% | 91.3% |
| 2c5wB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.89 | 81.0 | 5.53e-01 | 94.6% | 80.8% |
| 3fwlA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.88 | 80.0 | 5.45e-01 | 94.6% | 72.8% |
| 5df7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.87 | 76.0 | 5.33e-01 | 89.2% | 91.0% |
| 6pl6B01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.85 | 70.0 | 4.89e-01 | 84.6% | 90.4% |
| 4mnrA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 70.0 | 5.04e-01 | 88.5% | 94.3% |
| 6g9sA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.81 | 66.0 | 4.70e-01 | 84.6% | 95.6% |
| 1k25B02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.78 | 65.0 | 4.88e-01 | 87.7% | 87.7% |
| 2wadA04 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.78 | 66.0 | 4.74e-01 | 88.5% | 90.5% |
| 3lo7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.74 | 61.0 | 4.59e-01 | 85.4% | 92.0% |
| 1ifqB00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.68 | 50.0 | 5.09e-01 | 87.7% | 77.3% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.67 | 48.0 | 4.60e-01 | 89.2% | 65.1% |
| 1w63Q00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.64 | 46.0 | 4.42e-01 | 87.7% | 65.5% |
| 2xa7M01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 45.0 | 4.67e-01 | 88.5% | 79.2% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.60 | 49.0 | 4.50e-01 | 86.2% | 89.7% |
| 2bcfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 49.0 | 3.86e-01 | 86.9% | 91.6% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 45.0 | 4.14e-01 | 86.9% | 75.9% |
| 1l3lA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 43.0 | 3.93e-01 | 86.2% | 74.7% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4173946 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.97 | 90.0 | 6.47e-01 | 94.6% | 68.4% |
| 3973805 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.97 | 90.0 | 6.49e-01 | 94.6% | 62.6% |
| 4458271 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.97 | 90.0 | 6.44e-01 | 94.6% | 68.4% |
| 3165643 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.97 | 89.0 | 5.81e-01 | 94.6% | 77.3% |
| 4177374 | 223.3.1.14 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF29195 | 0.96 | 89.0 | 6.24e-01 | 94.6% | 71.3% |
| 3838610 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.95 | 86.0 | 6.58e-01 | 93.8% | 71.5% |
| 4485300 | 223.3.1.14 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF29195 | 0.92 | 84.0 | 6.25e-01 | 94.6% | 66.7% |
| 4061397 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.91 | 76.0 | 5.97e-01 | 85.4% | 73.2% |
| 3286678 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.91 | 82.0 | 6.13e-01 | 93.8% | 73.6% |
| 3573602 | 223.3.1.15 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF30382, PF30384 | 0.90 | 82.0 | 5.50e-01 | 94.6% | 66.4% |
| 4008460 | 223.3.1.18 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › PF30382 | 0.90 | 82.0 | 5.65e-01 | 94.6% | 69.1% |
| 3956080 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.90 | 81.0 | 6.12e-01 | 93.8% | 74.9% |
| 3981283 | 223.3.1.19 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › PF30382, PF30384 | 0.90 | 82.0 | 5.52e-01 | 94.6% | 63.2% |
| 3974035 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.90 | 82.0 | 6.14e-01 | 94.6% | 65.7% |
| 3588501 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.90 | 82.0 | 5.52e-01 | 94.6% | 76.7% |
| 4599893 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.89 | 82.0 | 6.11e-01 | 94.6% | 64.3% |
| 3166061 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.89 | 81.0 | 5.92e-01 | 94.6% | 58.7% |
| None | — | 0.88 | 81.0 | 6.07e-01 | 94.6% | 65.1% | |
| 4436836 | 223.3.1.14 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF29195 | 0.87 | 79.0 | 5.53e-01 | 94.6% | 50.4% |
| 4945318 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 48.0 | 5.04e-01 | 86.9% | 83.5% |
| 5044674 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 50.0 | 5.02e-01 | 89.2% | 79.2% |
| 4945493 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 47.0 | 4.82e-01 | 87.7% | 77.6% |
| 5045235 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 48.0 | 4.87e-01 | 89.2% | 78.5% |
| 4947696 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 47.0 | 4.80e-01 | 89.2% | 80.8% |
| 5070294 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 47.0 | 4.74e-01 | 89.2% | 80.0% |
| 5053655 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 47.0 | 4.69e-01 | 87.7% | 77.8% |
| 4964955 | 223.2.1.63 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 | 0.61 | 46.0 | 4.64e-01 | 87.7% | 79.1% |
| 5049690 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 47.0 | 4.67e-01 | 87.7% | 76.4% |
| 5069893 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 46.0 | 4.50e-01 | 87.7% | 73.6% |
| 3349559 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 39.0 | 4.00e-01 | 87.7% | 68.0% |
| 5046009 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 45.0 | 4.59e-01 | 87.7% | 80.0% |
| 3400015 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.59 | 45.0 | 4.59e-01 | 87.7% | 80.8% |
| 5052141 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 47.0 | 4.48e-01 | 87.7% | 72.0% |
| 3167876 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.59 | 48.0 | 4.38e-01 | 87.7% | 82.3% |
| 3783266 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.58 | 45.0 | 4.67e-01 | 86.9% | 85.6% |
| 3407363 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.57 | 45.0 | 4.35e-01 | 87.7% | 74.5% |
| 4997750 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 44.0 | 4.43e-01 | 89.2% | 80.0% |
| 4110679 | 4287.1.1.1 ↗ | beta sandwiches › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › ZapD | 0.57 | 23.0 | 2.87e-01 | 75.4% | 58.7% |
| 3783890 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.56 | 45.0 | 4.53e-01 | 87.7% | 86.7% |
| 3722450 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.56 | 45.0 | 4.40e-01 | 87.7% | 79.3% |
| 4130251 | 4287.1.1.1 ↗ | beta sandwiches › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › ZapD | 0.56 | 25.0 | 3.27e-01 | 77.7% | 73.3% |
| 4976523 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 45.0 | 4.42e-01 | 89.2% | 82.1% |
| 4028315 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.54 | 35.0 | 3.79e-01 | 70.8% | 76.4% |
| 6837 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.53 | 42.0 | 3.91e-01 | 85.4% | 75.0% |
| 3383244 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.51 | 33.0 | 3.35e-01 | 87.7% | 64.0% |
D6
medium
residues 456-558_580-602_656-695
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00136__D617-785
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00905.28 best | Transpeptidase | 49.9 | 3.70e-13 | 57.2% | 30.1% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fwlA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.93 | 90.0 | 6.49e-01 | 100.0% | 48.2% |
| 3udfA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.93 | 90.0 | 6.62e-01 | 100.0% | 50.7% |
| 3zg9B02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.92 | 90.0 | 6.69e-01 | 100.0% | 52.2% |
| 5cxwA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.90 | 87.0 | 6.37e-01 | 100.0% | 51.9% |
| 2c5wB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.89 | 86.0 | 6.26e-01 | 100.0% | 49.9% |
| 6kghA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.88 | 76.0 | 7.13e-01 | 88.6% | 95.9% |
| 5troA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.87 | 84.0 | 6.48e-01 | 100.0% | 60.9% |
| 6g9sA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.86 | 82.0 | 6.28e-01 | 100.0% | 64.8% |
| 4ovdA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.85 | 73.0 | 6.93e-01 | 88.6% | 95.8% |
| 7rd0A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.85 | 81.0 | 6.32e-01 | 100.0% | 63.0% |
| 3vskA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.84 | 80.0 | 6.06e-01 | 100.0% | 64.5% |
| 5df7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.83 | 80.0 | 6.06e-01 | 100.0% | 56.9% |
| 3ue3A03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 71.0 | 6.83e-01 | 88.6% | 95.6% |
| 4u3tB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 79.0 | 6.19e-01 | 100.0% | 61.5% |
| 4mnrA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 79.0 | 6.17e-01 | 100.0% | 65.2% |
| 2olvA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 76.0 | 5.85e-01 | 100.0% | 48.9% |
| 6pl6B01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.81 | 78.0 | 5.88e-01 | 100.0% | 58.2% |
| 3eqvA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.81 | 70.0 | 6.74e-01 | 88.6% | 95.6% |
| 2bg1A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.81 | 78.0 | 6.09e-01 | 100.0% | 57.7% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 64.0 | 5.26e-01 | 100.0% | 53.0% |
| 4jf6A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 63.0 | 5.47e-01 | 100.0% | 59.4% |
| 5ctnA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 64.0 | 5.57e-01 | 100.0% | 61.4% |
| 3lo7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 73.0 | 5.92e-01 | 100.0% | 62.6% |
| 6nhsA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 64.0 | 5.55e-01 | 100.0% | 60.7% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.75 | 63.0 | 5.46e-01 | 100.0% | 59.5% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.75 | 62.0 | 5.34e-01 | 100.0% | 57.7% |
| 1m6kA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.75 | 64.0 | 5.46e-01 | 100.0% | 59.2% |
| 2xepB02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.67 | 59.0 | 5.03e-01 | 100.0% | 60.2% |
| 4ewfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.66 | 63.0 | 5.23e-01 | 100.0% | 63.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3165643 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.96 | 94.0 | 6.46e-01 | 100.0% | 54.8% |
| 3951241 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.91 | 88.0 | 6.34e-01 | 100.0% | 49.8% |
| 3951192 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.90 | 87.0 | 5.99e-01 | 100.0% | 44.4% |
| 3588501 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.90 | 87.0 | 6.26e-01 | 100.0% | 47.5% |
| 3951983 | 3702.1.1.4 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Transpeptidase | 0.90 | 87.0 | 5.97e-01 | 100.0% | 44.5% |
| 4032151 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.90 | 86.0 | 6.47e-01 | 100.0% | 57.5% |
| 3951119 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.89 | 85.0 | 6.41e-01 | 100.0% | 58.3% |
| 3839186 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.89 | 85.0 | 6.41e-01 | 100.0% | 57.7% |
| 1853146 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.86 | 83.0 | 6.22e-01 | 100.0% | 60.2% |
| 4495366 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.86 | 82.0 | 6.08e-01 | 100.0% | 58.7% |
| 3163688 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.85 | 82.0 | 6.06e-01 | 100.0% | 58.4% |
| 4652220 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.83 | 81.0 | 6.12e-01 | 100.0% | 58.2% |
| 3966462 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.83 | 80.0 | 6.08e-01 | 100.0% | 56.5% |
| 3965638 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.83 | 80.0 | 5.63e-01 | 100.0% | 43.9% |
| 4077515 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.82 | 79.0 | 5.93e-01 | 100.0% | 63.9% |
| None | — | 0.82 | 79.0 | 5.61e-01 | 100.0% | 44.1% | |
| 3839475 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.82 | 79.0 | 5.91e-01 | 100.0% | 57.8% |
| 3950741 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.82 | 79.0 | 5.75e-01 | 100.0% | 49.7% |
| 3283393 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.81 | 78.0 | 5.72e-01 | 100.0% | 50.4% |
| 4565832 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.77 | 74.0 | 5.64e-01 | 100.0% | 58.0% |
| 3573602 | 223.3.1.15 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF30382, PF30384 | 0.77 | 74.0 | 5.31e-01 | 100.0% | 41.4% |
| 4496784 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.74 | 65.0 | 5.56e-01 | 100.0% | 61.4% |
| 4821910 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.61 | 37.0 | 4.51e-01 | 81.3% | 92.7% |