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CAKLQF020000004.1__CAH1076997.1__SAMEA5780031_01137__00225
Bact-VirCAKLQF020000004.1__CAH1076997.1__SAMEA5780031_01137__00225
Identity
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-68
Domain cluster:
rep: BML_coassembly_scaffold_25_prodigal-single.1__X__X__00229__D17-88
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00313.29 best | CSD | 36.1 | 6.60e-09 | 97.0% | 54.5% |
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.93 | 85.0 | 7.32e-01 | 100.0% | 65.7% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.89 | 78.0 | 7.56e-01 | 100.0% | 85.1% |
| 3go5A01 | 2.40.50.330 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.88 | 68.0 | 6.71e-01 | 97.0% | 77.5% |
| 1wfqA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.87 | 79.0 | 7.68e-01 | 100.0% | 89.0% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.85 | 79.0 | 7.98e-01 | 100.0% | 100.0% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.85 | 65.0 | 6.84e-01 | 100.0% | 90.2% |
| 2kcmA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 72.0 | 6.98e-01 | 98.5% | 87.8% |
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 55.0 | 5.11e-01 | 95.5% | 56.6% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 70.0 | 6.86e-01 | 100.0% | 86.3% |
| 5lm7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 71.0 | 6.77e-01 | 97.0% | 82.1% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 68.0 | 6.72e-01 | 98.5% | 87.1% |
| 1smxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 73.0 | 6.63e-01 | 98.5% | 92.0% |
| 2ytyA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 71.0 | 6.39e-01 | 100.0% | 72.7% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 61.0 | 6.49e-01 | 100.0% | 94.9% |
| 1kl9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 63.0 | 6.10e-01 | 98.5% | 77.3% |
| 3go5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 69.0 | 6.55e-01 | 98.5% | 82.3% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 42.0 | 4.55e-01 | 100.0% | 62.5% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 68.0 | 6.41e-01 | 98.5% | 81.2% |
| 2je6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 70.0 | 6.34e-01 | 100.0% | 86.4% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 64.0 | 5.52e-01 | 100.0% | 60.8% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.75 | 46.0 | 4.47e-01 | 100.0% | 55.3% |
| 2qgqA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 60.0 | 6.30e-01 | 98.5% | 96.7% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 51.0 | 5.92e-01 | 74.6% | 98.0% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.74 | 59.0 | 5.65e-01 | 100.0% | 74.4% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.74 | 40.0 | 4.38e-01 | 100.0% | 64.8% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 62.0 | 5.91e-01 | 100.0% | 79.7% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 65.0 | 5.45e-01 | 100.0% | 63.8% |
| 3k0xA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 60.0 | 5.31e-01 | 100.0% | 61.6% |
| 1d7qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 61.0 | 4.83e-01 | 100.0% | 44.1% |
| 3psiA06 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 65.0 | 5.66e-01 | 98.5% | 70.0% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.72 | 64.0 | 6.17e-01 | 100.0% | 93.3% |
| 2pi2D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 62.0 | 5.10e-01 | 100.0% | 52.8% |
| 3kf6A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 64.0 | 5.06e-01 | 100.0% | 55.1% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 63.0 | 5.23e-01 | 100.0% | 60.0% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 62.0 | 5.73e-01 | 100.0% | 87.6% |
| 1gd7A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 64.0 | 5.42e-01 | 100.0% | 78.9% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.71 | 52.0 | 5.13e-01 | 80.6% | 73.2% |
| 2bh8B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 50.0 | 5.42e-01 | 76.1% | 96.4% |
| 1a62A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 62.0 | 6.19e-01 | 98.5% | 97.1% |
| 1jt8A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 59.0 | 5.18e-01 | 100.0% | 61.8% |
| 1ty0A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 63.0 | 6.11e-01 | 100.0% | 93.3% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 62.0 | 5.50e-01 | 100.0% | 80.4% |
| 4pmwA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 62.0 | 5.91e-01 | 100.0% | 89.7% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 61.0 | 5.79e-01 | 100.0% | 84.1% |
| 2xvsA00 | 2.40.50.550 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 62.0 | 4.65e-01 | 100.0% | 49.4% |
| 1eujA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 63.0 | 4.69e-01 | 100.0% | 50.6% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 60.0 | 5.08e-01 | 100.0% | 59.3% |
| 3q8dA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 61.0 | 5.89e-01 | 100.0% | 92.2% |
| 2l55A00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.69 | 61.0 | 5.76e-01 | 100.0% | 84.1% |
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.69 | 62.0 | 5.78e-01 | 100.0% | 79.8% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 55.0 | 5.57e-01 | 100.0% | 89.6% |
| 3ntkB01 | 2.40.50.790 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 61.0 | 5.64e-01 | 100.0% | 83.7% |
| 6ipaA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 62.0 | 4.60e-01 | 100.0% | 49.7% |
| 1lm0A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 60.0 | 5.25e-01 | 100.0% | 92.1% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.68 | 55.0 | 5.53e-01 | 86.6% | 89.6% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 58.0 | 5.51e-01 | 100.0% | 81.2% |
| 6tnyB02 | 2.40.50.430 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 60.0 | 5.06e-01 | 100.0% | 64.3% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.67 | 50.0 | 5.32e-01 | 100.0% | 91.4% |
| 1b7yB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 61.0 | 5.00e-01 | 100.0% | 76.7% |
| 3mc0B02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 58.0 | 5.40e-01 | 100.0% | 91.7% |
| 3k6oA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.65 | 57.0 | 5.57e-01 | 100.0% | 91.8% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 39.0 | 3.16e-01 | 100.0% | 32.8% |
| 1fnuA01 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 55.0 | 5.24e-01 | 100.0% | 95.0% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 50.0 | 4.36e-01 | 91.0% | 100.0% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 38.0 | 2.45e-01 | 91.0% | 13.8% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 3.68e-01 | 73.1% | 83.5% |
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 37.0 | 3.48e-01 | 73.1% | 77.8% |
| 6g1nD01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 38.0 | 3.55e-01 | 76.1% | 97.6% |
| 2juoA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 43.0 | 3.99e-01 | 100.0% | 86.5% |
| 2ymaA00 | 3.10.310.60 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.50 | 40.0 | 3.24e-01 | 88.1% | 82.2% |
| 1jm1A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.50 | 41.0 | 3.06e-01 | 98.5% | 71.8% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969528 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.96 | 89.0 | 8.76e-01 | 100.0% | 92.9% |
| None | — | 0.92 | 87.0 | 7.91e-01 | 100.0% | 78.8% | |
| 3889662 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.92 | 80.0 | 8.12e-01 | 98.5% | 93.8% |
| None | — | 0.91 | 85.0 | 8.34e-01 | 100.0% | 94.3% | |
| 3715789 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.91 | 85.0 | 6.81e-01 | 100.0% | 61.7% |
| 3628127 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.90 | 85.0 | 6.75e-01 | 100.0% | 60.0% |
| 3411592 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.89 | 81.0 | 6.95e-01 | 100.0% | 65.0% |
| 3891410 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.89 | 81.0 | 7.58e-01 | 100.0% | 81.2% |
| 3970047 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.88 | 81.0 | 7.96e-01 | 100.0% | 94.3% |
| 4870003 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.88 | 82.0 | 7.23e-01 | 100.0% | 72.8% |
| 379851 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.87 | 81.0 | 7.96e-01 | 100.0% | 93.0% |
| 3600485 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.87 | 82.0 | 7.31e-01 | 100.0% | 81.1% |
| 3613173 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.86 | 76.0 | 6.46e-01 | 100.0% | 61.0% |
| 3703907 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.86 | 76.0 | 7.78e-01 | 100.0% | 98.5% |
| 3563077 | 2.1.1.188 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 | 0.86 | 79.0 | 7.26e-01 | 100.0% | 88.2% |
| 3591257 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 73.0 | 7.44e-01 | 97.0% | 96.9% |
| 3839910 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.83 | 70.0 | 7.21e-01 | 98.5% | 96.8% |
| 3387924 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 76.0 | 6.63e-01 | 98.5% | 76.8% |
| 3610271 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.82 | 74.0 | 7.39e-01 | 100.0% | 94.2% |
| 158926 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.82 | 73.0 | 6.63e-01 | 100.0% | 73.0% |
| 3227946 | 2.1.1.126 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272 | 0.82 | 68.0 | 6.91e-01 | 100.0% | 92.3% |
| 4030766 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.81 | 71.0 | 6.69e-01 | 100.0% | 80.0% |
| 2643145 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.81 | 74.0 | 6.52e-01 | 100.0% | 70.2% |
| 3244962 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 72.0 | 6.92e-01 | 100.0% | 85.3% |
| 3239137 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 74.0 | 6.49e-01 | 100.0% | 81.1% |
| 3626166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 72.0 | 6.63e-01 | 100.0% | 76.5% |
| 4951103 | 2.1.1.366 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3006 | 0.80 | 54.0 | 5.22e-01 | 77.6% | 62.7% |
| 3403665 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.80 | 70.0 | 6.55e-01 | 100.0% | 78.8% |
| 3997675 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 67.0 | 6.07e-01 | 94.0% | 67.8% |
| 3930532 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 72.0 | 6.73e-01 | 98.5% | 82.5% |
| 3227100 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 67.0 | 6.51e-01 | 100.0% | 82.7% |
| 5018098 | 2.14.1.6 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › DUF3006 | 0.79 | 53.0 | 5.16e-01 | 77.6% | 62.7% |
| 3619972 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 71.0 | 7.03e-01 | 100.0% | 94.3% |
| 3643920 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.79 | 71.0 | 5.79e-01 | 100.0% | 80.8% |
| 3988534 | 2.1.1.104 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_1st | 0.79 | 70.0 | 6.71e-01 | 98.5% | 86.7% |
| 3186247 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.78 | 68.0 | 5.42e-01 | 100.0% | 49.2% |
| 3684440 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 66.0 | 6.24e-01 | 98.5% | 77.5% |
| 4943372 | 2.1.1.361 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EIF_2_alpha | 0.78 | 72.0 | 6.72e-01 | 100.0% | 90.0% |
| 3854814 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.77 | 68.0 | 5.84e-01 | 100.0% | 61.9% |
| 3592532 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 69.0 | 6.38e-01 | 98.5% | 82.4% |
| 5035454 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 69.0 | 6.69e-01 | 98.5% | 93.3% |
| 3827546 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.77 | 67.0 | 6.18e-01 | 98.5% | 75.3% |
| 4942314 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.77 | 65.0 | 5.31e-01 | 100.0% | 51.7% |
| 4994639 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.77 | 70.0 | 6.32e-01 | 100.0% | 85.6% |
| 3880677 | 2.1.1.251 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_HELZ2 | 0.77 | 65.0 | 5.97e-01 | 100.0% | 72.9% |
| 4943416 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 66.0 | 5.73e-01 | 100.0% | 62.1% |
| 3258820 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.76 | 68.0 | 6.06e-01 | 100.0% | 74.7% |
| 4946960 | 2.1.1.361 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EIF_2_alpha | 0.76 | 69.0 | 6.48e-01 | 98.5% | 87.5% |
| 4676850 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.76 | 65.0 | 6.27e-01 | 100.0% | 84.0% |
| 4502670 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.76 | 67.0 | 4.70e-01 | 100.0% | 31.7% |
| 4942953 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 69.0 | 6.12e-01 | 100.0% | 81.1% |
| 3708592 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 68.0 | 5.83e-01 | 100.0% | 78.1% |
| 3698598 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 69.0 | 6.35e-01 | 100.0% | 87.1% |
| 3482955 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.76 | 64.0 | 5.16e-01 | 100.0% | 49.6% |
| 4315677 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 65.0 | 6.10e-01 | 100.0% | 78.8% |
| 4966133 | 2.1.1.377 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF25948 | 0.76 | 66.0 | 4.63e-01 | 100.0% | 32.0% |
| 4321154 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 68.0 | 4.78e-01 | 97.0% | 34.2% |
| 5057705 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 69.0 | 6.21e-01 | 100.0% | 85.6% |
| 3302497 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.76 | 67.0 | 5.54e-01 | 100.0% | 80.0% |
| 5027040 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 69.0 | 6.33e-01 | 100.0% | 90.6% |
| 3578390 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 65.0 | 4.58e-01 | 100.0% | 32.6% |
| 5030089 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 69.0 | 6.45e-01 | 100.0% | 92.5% |
| 4147443 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.75 | 67.0 | 6.29e-01 | 100.0% | 81.2% |
| 3320905 | 2.1.1.265 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RRP5 | 0.75 | 68.0 | 5.91e-01 | 100.0% | 72.0% |
| 3599951 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 66.0 | 5.64e-01 | 100.0% | 76.4% |
| 3917891 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 65.0 | 6.16e-01 | 100.0% | 81.2% |
| 3478639 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.74 | 61.0 | 5.78e-01 | 98.5% | 76.2% |
| 4140237 | 2.1.1.88 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 | 0.73 | 64.0 | 5.83e-01 | 100.0% | 72.2% |
| 3173942 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 63.0 | 6.16e-01 | 97.0% | 87.8% |
| 5051423 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.72 | 61.0 | 5.33e-01 | 100.0% | 61.0% |
| 3797361 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 64.0 | 5.22e-01 | 100.0% | 55.2% |
| 3439083 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.72 | 60.0 | 4.83e-01 | 100.0% | 47.7% |
| 3485640 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 64.0 | 5.45e-01 | 100.0% | 66.4% |
| 3267878 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 64.0 | 5.81e-01 | 100.0% | 77.8% |
| 3946740 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.71 | 65.0 | 5.86e-01 | 100.0% | 74.4% |
| 4526081 | 2.1.1.73 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N | 0.71 | 63.0 | 6.26e-01 | 100.0% | 94.3% |
| 3974613 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 61.0 | 5.78e-01 | 100.0% | 81.2% |
| 4263787 | 2.1.1.293 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27162 | 0.70 | 59.0 | 6.06e-01 | 98.5% | 96.9% |
| 3214896 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 62.0 | 5.30e-01 | 100.0% | 61.8% |
| 5059431 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.70 | 60.0 | 5.60e-01 | 100.0% | 76.5% |
| 4360971 | 2.1.1.293 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27162 | 0.70 | 59.0 | 6.05e-01 | 100.0% | 98.5% |
| 1317083 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.70 | 62.0 | 5.53e-01 | 100.0% | 73.7% |
| 381 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.70 | 61.0 | 5.88e-01 | 100.0% | 88.5% |
| 4407872 | 2.1.1.83 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N | 0.70 | 61.0 | 5.63e-01 | 100.0% | 76.5% |
| 5059561 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 62.0 | 5.33e-01 | 100.0% | 69.5% |
| 1731165 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.70 | 63.0 | 5.69e-01 | 100.0% | 75.3% |
| 3403112 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 61.0 | 5.48e-01 | 100.0% | 70.5% |
| 3478574 | 2.1.1.71 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TTC5_OB | 0.70 | 62.0 | 4.73e-01 | 100.0% | 51.6% |
| 4927935 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 62.0 | 6.00e-01 | 100.0% | 97.3% |
| 5064412 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 61.0 | 5.88e-01 | 100.0% | 94.7% |
| 4083834 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.69 | 58.0 | 4.77e-01 | 100.0% | 51.7% |
| 4646663 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.69 | 56.0 | 4.35e-01 | 86.6% | 44.4% |
| 3386993 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.68 | 56.0 | 5.67e-01 | 98.5% | 95.4% |
| 4948716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 60.0 | 5.72e-01 | 100.0% | 100.0% |
| 3262589 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 58.0 | 4.89e-01 | 100.0% | 55.8% |
| 4236717 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.65 | 58.0 | 4.78e-01 | 100.0% | 99.2% |
| 136897 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.64 | 56.0 | 5.11e-01 | 100.0% | 81.5% |
| 3970503 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.64 | 57.0 | 4.61e-01 | 100.0% | 97.7% |
| 3926148 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.63 | 55.0 | 4.54e-01 | 100.0% | 62.4% |
D2
high
residues 94-200
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06961.19 best | DUF1294 | 75.6 | 4.10e-21 | 51.4% | 100.0% |
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.74 | 48.0 | 4.75e-01 | 100.0% | 62.8% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 38.0 | 3.94e-01 | 86.0% | 55.4% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.70 | 37.0 | 4.35e-01 | 77.6% | 72.7% |
| 1hw1A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.69 | 42.0 | 3.73e-01 | 100.0% | 42.4% |
| 5tpmB00 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.69 | 42.0 | 3.85e-01 | 100.0% | 45.4% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.65 | 45.0 | 4.02e-01 | 99.1% | 51.7% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.64 | 44.0 | 4.22e-01 | 71.0% | 83.2% |
| 2ra1A01 | 1.20.58.790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 40.0 | 4.16e-01 | 81.3% | 68.4% |
| 3c1yA02 | 1.20.1260.110 | Mainly Alpha › Up-down Bundle › Ferritin › DNA integrity scanning linker region | 0.64 | 48.0 | 4.31e-01 | 79.4% | 78.4% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.63 | 43.0 | 3.61e-01 | 94.4% | 40.1% |
| 3ay5A02 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.62 | 43.0 | 3.77e-01 | 99.1% | 46.7% |
| 6a3kA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.61 | 45.0 | 4.23e-01 | 100.0% | 63.6% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 32.0 | 4.05e-01 | 77.6% | 84.6% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 42.0 | 3.74e-01 | 100.0% | 48.7% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 46.0 | 4.59e-01 | 82.2% | 93.8% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.60 | 41.0 | 3.94e-01 | 100.0% | 61.3% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.59 | 45.0 | 3.97e-01 | 81.3% | 93.3% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.59 | 39.0 | 3.74e-01 | 85.0% | 57.6% |
| 7qpgW01 | 1.10.357.150 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.58 | 46.0 | 3.88e-01 | 86.0% | 80.5% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.58 | 45.0 | 4.05e-01 | 82.2% | 63.6% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 46.0 | 4.06e-01 | 85.0% | 74.0% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 42.0 | 3.90e-01 | 79.4% | 78.9% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.57 | 38.0 | 4.16e-01 | 97.2% | 87.8% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 37.0 | 4.17e-01 | 100.0% | 89.9% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 43.0 | 3.85e-01 | 80.4% | 97.2% |
| 4hzuS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.56 | 44.0 | 3.84e-01 | 85.0% | 57.3% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.55 | 50.0 | 3.84e-01 | 99.1% | 74.1% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 26.0 | 3.18e-01 | 75.7% | 69.6% |
| 6v0kA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 46.0 | 3.38e-01 | 94.4% | 83.4% |
| 3dyjA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.54 | 48.0 | 4.20e-01 | 100.0% | 73.5% |
| 3u5nA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 34.0 | 3.31e-01 | 100.0% | 56.7% |
| 5zbqA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 40.0 | 2.93e-01 | 80.4% | 90.1% |
| 3b34A05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.53 | 41.0 | 2.97e-01 | 84.1% | 65.5% |
| 4qhpA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.53 | 41.0 | 3.00e-01 | 85.0% | 61.8% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.53 | 37.0 | 4.23e-01 | 73.8% | 100.0% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.52 | 43.0 | 4.16e-01 | 88.8% | 81.0% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 42.0 | 3.82e-01 | 86.9% | 81.0% |
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 38.0 | 4.12e-01 | 79.4% | 90.1% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.52 | 45.0 | 3.11e-01 | 99.1% | 91.4% |
| 1gqeA01 | 1.20.58.410 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor | 0.52 | 47.0 | 4.63e-01 | 99.1% | 94.7% |
| 7drjB01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.51 | 46.0 | 3.85e-01 | 100.0% | 86.3% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.51 | 43.0 | 4.07e-01 | 94.4% | 84.7% |
| 4hfvA01 | 1.20.1440.330 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.50 | 39.0 | 3.86e-01 | 100.0% | 76.9% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838924 | 101.1.1.140 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1294 | 0.90 | 67.0 | 6.69e-01 | 77.6% | 75.5% |
| 3941216 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.71 | 45.0 | 4.46e-01 | 100.0% | 60.0% |
| 3287411 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.69 | 49.0 | 3.94e-01 | 100.0% | 39.5% |
| 4964136 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.68 | 39.0 | 4.33e-01 | 81.3% | 70.6% |
| 3911777 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.66 | 49.0 | 4.51e-01 | 99.1% | 61.5% |
| 3615616 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 47.0 | 3.48e-01 | 73.8% | 37.9% |
| 3291371 | 5050.1.1.60 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_3 | 0.66 | 47.0 | 3.84e-01 | 100.0% | 40.5% |
| 3920730 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.66 | 46.0 | 3.70e-01 | 100.0% | 37.6% |
| 3388493 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.66 | 48.0 | 4.56e-01 | 99.1% | 63.8% |
| 4033204 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.65 | 46.0 | 3.74e-01 | 100.0% | 39.5% |
| 3766437 | 601.16.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › Insc_C | 0.64 | 47.0 | 4.63e-01 | 100.0% | 71.3% |
| 3988293 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.64 | 45.0 | 3.74e-01 | 100.0% | 41.6% |
| 4966056 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.64 | 45.0 | 3.86e-01 | 100.0% | 45.1% |
| 4033447 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.63 | 45.0 | 3.71e-01 | 100.0% | 41.1% |
| 5045605 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.63 | 44.0 | 3.52e-01 | 100.0% | 35.0% |
| 3997160 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.63 | 43.0 | 4.49e-01 | 99.1% | 75.0% |
| 5052717 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.63 | 44.0 | 3.61e-01 | 94.4% | 39.0% |
| 5014720 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.62 | 44.0 | 3.62e-01 | 97.2% | 40.5% |
| 3622845 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.62 | 44.0 | 4.25e-01 | 99.1% | 63.2% |
| 3968917 | 5050.1.1.60 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_3 | 0.62 | 44.0 | 3.58e-01 | 100.0% | 38.0% |
| 3262063 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 46.0 | 3.04e-01 | 78.5% | 25.5% |
| 4410536 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.62 | 45.0 | 3.74e-01 | 100.0% | 42.1% |
| 4369316 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.62 | 44.0 | 3.55e-01 | 100.0% | 38.5% |
| 3585753 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.61 | 35.0 | 3.84e-01 | 76.6% | 67.8% |
| 4675311 | 632.19.1.5 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › TMEM208_SND2 | 0.61 | 43.0 | 4.19e-01 | 99.1% | 65.0% |
| 3405476 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 43.0 | 3.51e-01 | 100.0% | 39.0% |
| 3283513 | 5050.1.1.60 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_3 | 0.61 | 44.0 | 3.59e-01 | 100.0% | 39.5% |
| 4012742 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.60 | 47.0 | 3.57e-01 | 84.1% | 93.2% |
| 5026259 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 44.0 | 3.63e-01 | 100.0% | 41.5% |
| 4994917 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.59 | 40.0 | 2.99e-01 | 80.4% | 29.8% |
| 3715090 | 109.24.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 | 0.59 | 43.0 | 4.27e-01 | 77.6% | 87.8% |
| 4571267 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.59 | 42.0 | 3.52e-01 | 73.8% | 56.2% |
| 3420292 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.58 | 47.0 | 4.16e-01 | 84.1% | 66.0% |
| 3806463 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.58 | 45.0 | 3.96e-01 | 82.2% | 63.2% |
| 3580090 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.57 | 38.0 | 3.58e-01 | 98.1% | 56.2% |
| 3678796 | 109.4.1.1411 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30303 | 0.56 | 42.0 | 3.23e-01 | 77.6% | 53.9% |
| 3611860 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 2.71e-01 | 85.0% | 23.1% |
| 3724321 | 6155.1.1.5 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › ER_lumen_recept | 0.54 | 48.0 | 3.85e-01 | 97.2% | 95.2% |
| 3377749 | 3843.1.1.15 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › ETR1_N | 0.54 | 38.0 | 3.99e-01 | 78.5% | 77.0% |
| 4595400 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.54 | 45.0 | 3.08e-01 | 90.7% | 38.9% |
| 3616807 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 46.0 | 3.57e-01 | 93.5% | 64.4% |
| 3930417 | 7004.1.1.0 ↗ | 0.53 | 36.0 | 4.03e-01 | 95.3% | 89.4% | |
| 4953068 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.52 | 45.0 | 3.64e-01 | 90.7% | 70.3% |
| 4567439 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.52 | 41.0 | 3.57e-01 | 85.0% | 88.8% |
| 3443180 | 109.4.1.241 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3458_C | 0.52 | 39.0 | 2.87e-01 | 80.4% | 65.5% |
| 5025850 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 44.0 | 3.59e-01 | 90.7% | 75.4% |
| 3381950 | 109.4.1.1411 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30303 | 0.52 | 38.0 | 2.93e-01 | 78.5% | 48.2% |
| 3584217 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.52 | 36.0 | 3.57e-01 | 98.1% | 66.1% |
| 3587045 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.52 | 46.0 | 3.39e-01 | 100.0% | 50.0% |
| 3631742 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 45.0 | 3.77e-01 | 100.0% | 57.7% |
| 3741125 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.51 | 45.0 | 3.68e-01 | 100.0% | 54.9% |
| 4018111 | 601.16.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase | 0.50 | 45.0 | 3.82e-01 | 100.0% | 61.7% |
| 5009845 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.50 | 45.0 | 3.70e-01 | 100.0% | 55.5% |
| 4490775 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 45.0 | 3.45e-01 | 100.0% | 49.8% |
| 3282854 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 44.0 | 3.60e-01 | 100.0% | 69.5% |
| 4951671 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 44.0 | 3.66e-01 | 97.2% | 57.9% |