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CAKLQF020000005.1__CAH1078118.1__SAMEA5780031_01230__00075

Bact-Vir

CAKLQF020000005.1__CAH1078118.1__SAMEA5780031_01230__00075

Identity

Kingdom:
phage

Quality

87.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 85-246
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.59 26.0 3.35e-01 98.8% 69.6%
2k0nA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.58 26.0 3.47e-01 84.6% 77.6%
4i9oA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.57 25.0 3.51e-01 84.0% 84.6%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.55 23.0 3.20e-01 86.4% 76.5%
2gbbB00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.52 34.0 3.50e-01 98.1% 66.5%
2v7fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.89e-01 93.8% 83.5%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.51 28.0 3.25e-01 83.3% 75.9%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.50 32.0 3.37e-01 97.5% 69.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230949 103.4.1.1 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX 0.62 27.0 3.86e-01 85.8% 86.7%
3728568 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.61 22.0 3.58e-01 79.0% 88.3%
3465214 103.4.1.5 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 0.57 26.0 3.57e-01 86.4% 83.7%
5081991 5067.1.1.0 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.55 39.0 3.98e-01 97.5% 71.9%
3456467 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.55 24.0 3.07e-01 98.8% 69.4%
3724006 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.54 35.0 3.32e-01 90.1% 53.0%
4001278 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.51 35.0 3.65e-01 96.3% 74.7%
3404120 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.51 33.0 3.47e-01 100.0% 71.7%
5078302 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.51 27.0 3.33e-01 93.2% 81.0%
3705510 5076.1.1.0 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier 0.50 42.0 3.91e-01 90.1% 98.0%
4170915 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.50 35.0 3.41e-01 80.9% 64.6%
D2 medium residues 28-83
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04257.21 best Exonuc_V_gamma 34.6 1.70e-08 100.0% 15.9%
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ab5A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 54.0 4.22e-01 85.7% 36.0%
1k66A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 60.0 4.40e-01 92.9% 36.9%
3ilhA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 55.0 4.28e-01 96.4% 38.3%
4zylB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 57.0 4.23e-01 94.6% 35.4%
5im4F00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.69 58.0 4.46e-01 94.6% 66.4%
3khtA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 51.0 3.95e-01 85.7% 34.8%
3wbkB03 3.40.50.10050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 0.68 49.0 3.94e-01 85.7% 38.3%
4pcaB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 54.0 3.69e-01 92.9% 33.9%
2lciA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 55.0 4.12e-01 91.1% 51.5%
4eswA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.67 48.0 3.83e-01 76.8% 42.3%
4r75A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.66 51.0 3.76e-01 89.3% 30.1%
2xgjB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 54.0 3.76e-01 96.4% 59.2%
3waeB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.65 47.0 3.62e-01 85.7% 30.9%
3mtqB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.65 53.0 4.03e-01 92.9% 63.5%
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 47.0 3.72e-01 87.5% 35.9%
4dccA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 52.0 4.08e-01 94.6% 66.7%
3pdiB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.64 51.0 3.93e-01 94.6% 64.1%
1utbB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 49.0 3.85e-01 87.5% 41.4%
3onmA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 45.0 3.79e-01 75.0% 44.8%
3mebA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.63 53.0 3.44e-01 100.0% 79.1%
3t6kA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 46.0 3.68e-01 91.1% 37.7%
1d9yA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 47.0 3.56e-01 89.3% 31.4%
1u14A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.62 47.0 3.33e-01 80.4% 39.1%
5t5dA00 3.40.35.10 Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component 0.62 50.0 3.70e-01 94.6% 34.0%
1xvxA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.61 46.0 3.47e-01 87.5% 31.0%
1atgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 45.0 3.62e-01 85.7% 38.5%
2xdqA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.60 50.0 3.88e-01 98.2% 86.0%
3tmgA02 3.40.190.100 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Glycine betaine-binding periplasmic protein; domain 2 0.59 44.0 3.60e-01 80.4% 43.1%
2hxwA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 45.0 3.67e-01 87.5% 56.8%
2jfzA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 46.0 3.73e-01 91.1% 81.4%
2lqoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 40.0 3.57e-01 85.7% 47.7%
1eljA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 45.0 3.33e-01 98.2% 30.6%
3jv9A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 44.0 3.64e-01 91.1% 45.4%
5f7vA00 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 46.0 2.85e-01 96.4% 13.9%
5bseA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 44.0 3.27e-01 91.1% 93.1%
2heuB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 43.0 3.26e-01 92.9% 33.1%
4ntlA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 42.0 3.18e-01 82.1% 36.8%
1iejA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 40.0 3.07e-01 78.6% 34.3%
3qufA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 43.0 3.32e-01 94.6% 34.6%
6o9aA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 40.0 3.31e-01 80.4% 69.0%
3k32B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 45.0 3.22e-01 96.4% 98.0%
1y1pA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 43.0 2.79e-01 94.6% 27.2%
1i6aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 43.0 3.68e-01 94.6% 50.0%
3sy8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 43.0 3.38e-01 92.9% 51.5%
1a04A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 44.0 3.58e-01 96.4% 91.9%
4eqbA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 40.0 3.04e-01 91.1% 29.1%
1xs5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 42.0 3.18e-01 83.9% 38.1%
1utbB02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 42.0 3.62e-01 89.3% 70.7%
2v84A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 40.0 3.03e-01 89.3% 29.2%
3netB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.54 39.0 3.36e-01 82.1% 45.9%
3lvuB00 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.54 41.0 2.77e-01 87.5% 25.3%
2hxrB00 3.40.190.290 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.54 41.0 2.92e-01 87.5% 23.8%
3pamB00 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.54 41.0 2.78e-01 87.5% 25.2%
2xxpA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 43.0 3.64e-01 94.6% 73.3%
3ho7A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 40.0 3.34e-01 92.9% 41.5%
5iaiA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 47.0 3.26e-01 100.0% 29.2%
2o1mA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 39.0 3.14e-01 80.4% 68.6%
2v25A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 41.0 3.42e-01 82.1% 46.5%
2jfnA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 42.0 3.51e-01 94.6% 81.6%
3fbtA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.53 43.0 3.27e-01 89.3% 36.4%
1jetA03 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.53 43.0 2.99e-01 91.1% 58.3%
6dtuA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 40.0 2.97e-01 89.3% 27.7%
1npyA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.53 40.0 3.39e-01 87.5% 47.0%
2vxbA02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.53 37.0 3.39e-01 91.1% 53.1%
1ixcA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 39.0 3.35e-01 85.7% 48.0%
1rzuA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 42.0 2.99e-01 98.2% 80.9%
1jflA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 39.0 3.34e-01 89.3% 84.4%
2ozzA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 38.0 3.01e-01 87.5% 34.5%
3fhlA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 40.0 3.04e-01 85.7% 86.2%
3agkA03 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.50 34.0 2.99e-01 82.1% 43.0%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.50 39.0 3.39e-01 89.3% 53.2%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3981625 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.82 74.0 4.02e-01 98.2% 6.7%
4348084 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.81 73.0 4.00e-01 100.0% 7.0%
4137481 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.77 68.0 3.77e-01 100.0% 7.5%
4127852 2007.1.10.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like › PF27163 0.75 60.0 5.34e-01 87.5% 61.3%
2756758 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.74 58.0 4.37e-01 94.6% 34.8%
3184621 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.74 59.0 4.50e-01 94.6% 37.0%
3734723 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.73 61.0 4.55e-01 100.0% 36.0%
2841830 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.70 53.0 3.92e-01 82.1% 31.7%
5038922 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.69 51.0 4.61e-01 87.5% 57.5%
3949249 7523.1.1.26 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_6 0.68 52.0 3.76e-01 87.5% 28.2%
4010090 2007.2.2.9 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PF30456 0.67 52.0 4.49e-01 92.9% 53.3%
3961512 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.66 56.0 3.60e-01 94.6% 36.6%
2527000 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.65 54.0 4.35e-01 100.0% 46.8%
3966156 7523.1.1.28 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 0.65 48.0 3.43e-01 87.5% 24.7%
1678143 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.65 50.0 4.10e-01 89.3% 44.5%
1759407 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.65 50.0 4.14e-01 89.3% 45.4%
4139309 2007.1.14.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro 0.64 52.0 3.84e-01 94.6% 60.0%
3662730 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.63 50.0 3.25e-01 94.6% 32.0%
3283495 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 50.0 3.85e-01 92.9% 37.8%
3975431 2007.1.3.41 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF30372 0.63 46.0 3.63e-01 83.9% 35.6%
3589167 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.63 51.0 3.90e-01 94.6% 55.7%
5073529 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 42.0 3.50e-01 71.4% 66.7%
3944605 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.61 48.0 3.93e-01 92.9% 65.0%
2812619 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.61 46.0 3.98e-01 91.1% 49.5%
1518787 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.61 46.0 3.90e-01 87.5% 47.1%
4475583 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.61 47.0 3.53e-01 91.1% 32.3%
3611817 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.60 50.0 3.99e-01 98.2% 63.2%
4135510 2007.1.5.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like 0.60 47.0 3.44e-01 89.3% 56.4%
4950484 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.59 50.0 3.69e-01 98.2% 96.9%
3988274 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.59 48.0 3.59e-01 98.2% 32.4%
3648544 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.59 44.0 3.64e-01 83.9% 42.7%
1276197 2007.1.5.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like 0.59 46.0 3.47e-01 89.3% 60.7%
3744633 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.58 43.0 3.52e-01 89.3% 40.0%
4797423 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.58 43.0 3.73e-01 85.7% 46.1%
1884680 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.58 46.0 3.81e-01 94.6% 46.1%
4511043 2007.1.16.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn 0.58 45.0 3.68e-01 89.3% 70.4%
3519231 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.58 45.0 3.20e-01 89.3% 25.6%
2392374 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.58 42.0 3.63e-01 91.1% 46.0%
1518789 7523.1.1.29 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.58 42.0 3.66e-01 85.7% 47.0%
4958720 7523.1.1.22 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.58 46.0 3.74e-01 94.6% 47.5%
4288608 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 2.89e-01 96.4% 20.3%
3394097 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.58 45.0 3.82e-01 92.9% 50.0%
5010696 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.57 43.0 3.60e-01 89.3% 48.2%
4026428 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.57 44.0 3.53e-01 94.6% 39.3%
3915450 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.56 43.0 3.62e-01 87.5% 49.5%
4573080 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 43.0 3.72e-01 89.3% 51.0%
4182641 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.56 43.0 3.06e-01 94.6% 25.4%
4508881 7523.1.1.28 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 0.56 42.0 2.73e-01 92.9% 15.4%
4033775 7523.1.1.30 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11 0.56 42.0 2.80e-01 91.1% 17.0%
4955201 7523.1.1.19 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1 0.55 42.0 3.56e-01 85.7% 50.0%
2985991 7523.1.1.2 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Transferrin 0.55 42.0 2.83e-01 91.1% 24.3%
3974584 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.54 39.0 3.32e-01 80.4% 44.0%
4339124 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.54 40.0 3.95e-01 91.1% 78.3%
1788586 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.54 47.0 3.68e-01 100.0% 45.9%
3286710 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.54 40.0 3.47e-01 89.3% 49.5%
3966875 7577.1.1.3 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 0.54 45.0 2.86e-01 100.0% 30.1%
1276279 2007.1.5.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race 0.53 42.0 3.26e-01 94.6% 78.5%
1518727 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.53 40.0 3.82e-01 92.9% 71.1%
3277777 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.53 38.0 3.31e-01 85.7% 46.0%
3947400 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.53 39.0 3.02e-01 87.5% 32.0%
1520261 7523.1.1.28 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 0.52 41.0 3.38e-01 87.5% 64.8%
4407965 2007.1.1.12 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Shikimate_dh_N 0.52 38.0 3.21e-01 80.4% 45.7%
4671615 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.52 40.0 3.47e-01 94.6% 52.4%
4972099 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.52 39.0 2.78e-01 94.6% 23.1%
3983316 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.51 39.0 3.51e-01 89.3% 56.7%
4121491 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.51 38.0 3.34e-01 91.1% 52.4%
4125289 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.51 39.0 3.44e-01 91.1% 53.2%
4323393 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.51 38.0 3.30e-01 91.1% 53.3%
4973363 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.51 39.0 3.32e-01 94.6% 47.8%
D3 medium residues 409-498_716-810
PDB
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w36F03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.89 86.0 7.29e-01 100.0% 68.5%
3u4qB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 74.0 6.93e-01 100.0% 82.1%
6vsxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 56.0 6.06e-01 99.5% 86.2%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 54.0 5.83e-01 96.8% 85.1%
5eanA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 53.0 5.05e-01 94.6% 67.1%
1pjrA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 63.0 6.09e-01 100.0% 85.0%
1vecA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 54.0 5.23e-01 94.1% 72.8%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 55.0 5.34e-01 94.1% 76.6%
3u4qA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 64.0 5.62e-01 100.0% 76.9%
6jimB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 40.0 4.66e-01 100.0% 81.2%
7clgB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 52.0 5.72e-01 94.1% 96.1%
3vkwA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 41.0 4.54e-01 100.0% 75.7%
3i5xA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 57.0 5.18e-01 94.1% 78.1%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 55.0 5.41e-01 93.0% 84.5%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 57.0 5.50e-01 94.1% 86.2%
7nadx01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 5.23e-01 94.1% 79.0%
6s8oB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 55.0 5.30e-01 93.0% 87.7%
4ljyA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 55.0 4.86e-01 94.6% 86.2%
5supC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 5.12e-01 93.0% 84.0%
1q0uB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 5.15e-01 93.0% 81.9%
1w36D03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 51.0 5.28e-01 100.0% 93.1%
7xpcA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 4.31e-01 91.4% 97.3%
6fwrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 55.0 5.34e-01 95.7% 91.5%
2db3A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 4.80e-01 95.1% 85.5%
4ljyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 56.0 5.55e-01 100.0% 96.9%
2xauA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 51.0 5.22e-01 93.5% 96.7%
2xzlA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 54.0 5.19e-01 100.0% 94.8%
1pjrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 49.0 4.79e-01 94.1% 83.7%
1c9kB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 4.55e-01 92.4% 86.1%
3pp8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 45.0 4.54e-01 85.4% 99.5%
2e0iA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 36.0 4.17e-01 82.2% 94.4%
1h1lD03 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 32.0 3.65e-01 83.8% 76.7%
1b0zA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 47.0 4.37e-01 90.8% 86.8%
4b3fX03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 4.39e-01 93.0% 80.7%
2i6uA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.54 39.0 4.19e-01 81.6% 85.1%
3g68B01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.54 37.0 3.57e-01 88.1% 61.2%
3ohsX01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 34.0 4.00e-01 80.0% 93.4%
6i1dA02 3.40.50.10890 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 41.0 4.12e-01 94.1% 78.6%
3evtA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 42.0 4.31e-01 83.2% 90.7%
5iceA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 3.82e-01 83.8% 67.7%
1w36C01 3.40.50.10930 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 46.0 4.39e-01 92.4% 93.1%
3tw8A02 3.40.50.11500 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DENN domain, C-terminal lobe 0.53 36.0 3.81e-01 85.4% 76.8%
2vdwG00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 43.0 3.83e-01 88.6% 92.0%
6i6lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 3.81e-01 84.3% 68.0%
3qhqB01 3.40.50.11940 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 36.0 3.92e-01 95.1% 85.2%
2acfB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 41.0 4.21e-01 93.0% 86.7%
4njmA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 4.46e-01 85.4% 99.4%
1fp1D02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 3.95e-01 88.6% 73.2%
3i83A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 31.0 3.19e-01 81.6% 61.0%
3eccA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 4.25e-01 83.2% 99.4%
5e7pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 4.16e-01 82.2% 90.8%
1poxA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.50 41.0 4.11e-01 85.9% 94.7%
4fwiB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 3.68e-01 93.0% 76.5%
5mn7A01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.50 39.0 4.12e-01 80.5% 99.4%
1f21A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 31.0 3.42e-01 88.6% 74.3%
2r5fA00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 43.0 4.10e-01 92.4% 92.2%
2qkbA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 32.0 3.48e-01 93.0% 76.3%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3958066 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.92 65.0 4.82e-01 71.4% 84.8%
3277953 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.91 89.0 5.56e-01 100.0% 55.8%
3981625 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.91 89.0 5.52e-01 100.0% 48.5%
2781632 2004.1.1.401 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RecC_4th 0.91 88.0 6.37e-01 100.0% 89.0%
2770923 2004.1.1.401 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RecC_4th 0.91 88.0 6.21e-01 100.0% 83.1%
3965416 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.90 87.0 5.52e-01 100.0% 50.5%
4137481 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.89 87.0 5.49e-01 100.0% 50.5%
4348084 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.87 84.0 5.28e-01 100.0% 47.6%
3972346 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 81.0 5.02e-01 100.0% 45.6%
4944001 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 71.0 4.56e-01 92.4% 50.3%
4371976 2004.1.1.226 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.79 75.0 4.91e-01 100.0% 49.9%
4126026 2004.1.1.494 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 0.78 75.0 4.85e-01 100.0% 48.4%
4465325 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.78 70.0 5.11e-01 93.5% 78.7%
4183514 2004.1.1.412 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AddB_5th 0.78 70.0 5.12e-01 93.0% 80.7%
4630597 2004.1.1.569 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N 0.78 74.0 4.78e-01 100.0% 50.7%
4257805 2004.1.1.226 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.78 72.0 4.70e-01 96.8% 52.5%
4431610 2004.1.1.492 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N, PF27467 0.78 74.0 4.78e-01 100.0% 50.9%
4289957 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 71.0 4.24e-01 95.7% 32.3%
3290816 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.77 73.0 4.43e-01 100.0% 37.0%
4541844 2004.1.1.412 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AddB_5th 0.77 71.0 5.21e-01 95.1% 84.7%
4348379 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 72.0 5.31e-01 97.3% 81.6%
4969305 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 70.0 5.46e-01 95.1% 90.8%
4608944 2004.1.1.492 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N, PF27467 0.76 73.0 4.69e-01 100.0% 48.8%
4034349 2004.1.1.569 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N 0.76 72.0 4.67e-01 100.0% 51.1%
4282797 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.76 71.0 5.40e-01 97.3% 91.7%
4306892 2004.1.1.494 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 0.76 72.0 4.66e-01 100.0% 48.9%
4163068 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 72.0 4.35e-01 100.0% 34.1%
4042513 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 71.0 4.29e-01 100.0% 33.6%
4241568 2004.1.1.492 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N, PF27467 0.75 71.0 4.60e-01 100.0% 50.7%
3972737 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.75 61.0 4.28e-01 100.0% 29.3%
4336048 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 71.0 4.26e-01 100.0% 32.9%
None 0.75 71.0 4.27e-01 100.0% 31.7%
4927000 2008.1.1.217 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UvrD-helicase 0.75 71.0 4.28e-01 100.0% 36.3%
3385874 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 67.0 5.46e-01 93.5% 87.6%
4465406 2004.1.1.569 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N 0.74 71.0 4.59e-01 100.0% 48.6%
4964805 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 70.0 5.29e-01 99.5% 89.2%
4615220 2004.1.1.483 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_19, UvrD_C 0.72 69.0 4.20e-01 100.0% 47.0%
3645906 2004.1.1.508 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 0.71 64.0 4.92e-01 93.5% 96.6%
5022188 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.71 66.0 4.61e-01 100.0% 34.2%
5052225 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.70 63.0 4.97e-01 92.4% 91.2%
3832703 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.70 67.0 4.35e-01 100.0% 52.4%
4944436 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 55.0 4.18e-01 100.0% 36.6%
4932092 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.70 66.0 4.26e-01 100.0% 48.6%
5005259 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.70 67.0 4.38e-01 100.0% 50.1%
3178533 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.70 66.0 4.19e-01 100.0% 51.0%
3588547 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.70 66.0 4.36e-01 100.0% 98.2%
4420366 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.70 64.0 5.07e-01 95.1% 92.0%
3735016 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.69 66.0 4.29e-01 100.0% 50.8%
3186716 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.69 66.0 4.24e-01 100.0% 48.7%
3284594 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.69 66.0 4.27e-01 99.5% 51.9%
3334874 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.69 66.0 5.05e-01 100.0% 95.0%
3464895 2004.1.1.1107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, Viral_helicase1, UvrD_C 0.69 65.0 4.28e-01 100.0% 53.1%
4244665 2004.1.1.1006 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29246, PF29248 0.69 65.0 4.33e-01 99.5% 59.5%
3386264 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.69 63.0 4.86e-01 95.1% 97.0%
3741693 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.68 65.0 4.24e-01 100.0% 49.3%
4449595 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.68 65.0 4.29e-01 100.0% 51.2%
4580137 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.68 65.0 4.33e-01 100.0% 49.2%
4007755 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 55.0 3.78e-01 100.0% 26.3%
3964423 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.68 65.0 4.33e-01 100.0% 53.0%
3980669 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.68 55.0 3.95e-01 100.0% 31.6%
3945743 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.68 55.0 3.96e-01 100.0% 31.9%
4954234 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.68 64.0 5.98e-01 99.5% 90.0%
3837994 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.68 64.0 4.30e-01 99.5% 52.6%
3698565 2004.1.1.508 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 0.67 61.0 4.55e-01 95.1% 96.0%
4227542 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.67 64.0 4.20e-01 99.5% 51.1%
4932842 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.66 59.0 4.02e-01 95.1% 49.3%
3609613 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 58.0 5.16e-01 94.1% 77.3%
3642727 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.65 57.0 4.63e-01 92.4% 81.2%
4954685 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.65 59.0 4.09e-01 100.0% 31.1%
4198090 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.64 57.0 4.24e-01 95.7% 85.6%
4030474 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.64 61.0 4.23e-01 100.0% 35.5%
3597258 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 56.0 4.79e-01 94.1% 91.4%
4221109 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.63 58.0 4.05e-01 97.3% 43.5%
3648436 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.63 55.0 4.08e-01 93.5% 80.4%
3391572 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.62 54.0 5.07e-01 92.4% 75.6%
3460837 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.62 55.0 4.64e-01 94.1% 74.2%
3916856 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.61 55.0 4.84e-01 94.6% 84.2%
3275509 2004.1.1.220 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 0.61 55.0 4.98e-01 95.7% 74.7%
3386657 2004.1.1.483 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_19, UvrD_C 0.61 58.0 3.78e-01 100.0% 39.7%
3642691 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.57 40.0 4.39e-01 92.4% 89.7%
3744567 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 53.0 4.93e-01 100.0% 88.3%
3289802 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.57 51.0 3.54e-01 94.1% 65.3%
3785074 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.57 50.0 3.26e-01 93.5% 86.7%
3542881 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.57 54.0 4.90e-01 100.0% 90.6%
1175828 2007.6.1.3 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI 0.56 46.0 4.25e-01 86.5% 71.4%
3595196 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 45.0 3.13e-01 86.5% 35.0%
4306615 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.56 49.0 4.46e-01 94.1% 83.7%
3803657 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.53 43.0 4.10e-01 84.9% 76.7%
3290854 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 43.0 3.95e-01 88.1% 65.6%
3261439 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.52 41.0 4.25e-01 81.1% 94.1%
4160326 2003.1.14.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace 0.51 41.0 4.33e-01 85.9% 94.1%
D4 medium residues 499-529_624-715
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.58 39.0 4.33e-01 92.7% 85.7%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 43.0 3.78e-01 81.3% 90.4%
1fbwA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.52 43.0 2.98e-01 88.6% 45.9%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 45.0 4.15e-01 93.5% 86.2%
2vm6A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.51 35.0 3.32e-01 82.1% 59.7%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.50 36.0 3.16e-01 75.6% 75.4%
3no6A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.50 39.0 3.21e-01 82.1% 76.2%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3735131 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 37.0 3.58e-01 86.2% 54.5%
4067176 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.58 44.0 3.69e-01 80.5% 81.4%
4456090 5086.1.1.94 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD 0.56 35.0 2.93e-01 99.2% 34.2%
3194608 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.55 41.0 3.14e-01 79.7% 63.0%
3586956 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.55 44.0 3.45e-01 82.9% 69.4%
5076503 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.54 43.0 3.65e-01 82.9% 83.8%
4972606 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.54 43.0 3.63e-01 83.7% 84.0%
4008800 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.54 40.0 3.30e-01 78.0% 75.1%
3928047 601.1.2.111 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DUF7087 0.54 40.0 3.84e-01 76.4% 90.6%
3943534 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.53 44.0 3.70e-01 85.4% 85.6%
3247392 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.53 37.0 3.50e-01 72.4% 95.3%
4946852 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.53 42.0 3.45e-01 83.7% 83.3%
5057227 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.52 39.0 3.92e-01 80.5% 96.2%
3868831 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.52 39.0 3.52e-01 78.9% 69.7%
3977514 5050.1.1.10 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 0.52 42.0 3.45e-01 85.4% 88.8%
3615004 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.51 40.0 3.36e-01 84.6% 79.5%
3987427 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 39.0 3.37e-01 81.3% 83.6%
5060738 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.50 39.0 3.40e-01 82.1% 90.0%
D5 medium residues 530-623
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27451.1 best RecC_4th 69.5 5.50e-19 100.0% 44.6%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w36C04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.91 86.0 6.39e-01 100.0% 44.5%
3hsqA02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.58 35.0 3.92e-01 100.0% 82.4%
5f42A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.55 33.0 3.47e-01 100.0% 67.1%
3acxA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 40.0 2.91e-01 78.7% 35.2%
3jw4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 35.0 3.18e-01 100.0% 51.6%
5ljmA00 1.20.58.2190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 46.0 3.63e-01 98.9% 77.8%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 32.0 3.16e-01 100.0% 56.6%
1rx0C01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.51 39.0 3.67e-01 100.0% 65.9%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3972346 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.92 87.0 4.94e-01 100.0% 11.4%
4137481 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.92 87.0 4.96e-01 100.0% 12.2%
3981625 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.91 86.0 4.89e-01 100.0% 11.3%
3277953 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.91 87.0 4.91e-01 100.0% 11.7%
3958066 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.90 85.0 5.39e-01 100.0% 23.5%
3965416 2004.1.1.549 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 0.87 77.0 4.45e-01 100.0% 11.8%
3262509 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 38.0 3.95e-01 97.9% 58.9%
5028621 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.63 36.0 4.04e-01 100.0% 72.0%
3381711 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.55 33.0 3.26e-01 90.4% 53.3%
3325314 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.54 28.0 3.18e-01 79.8% 65.7%
3535138 5001.1.1.3 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.53 41.0 3.02e-01 85.1% 78.2%
3218245 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.53 43.0 3.58e-01 93.6% 89.7%
3754987 101.1.1.208 alpha arrays › HTH › HTH › Three-helical HTH › Rrn7_cyclin_C 0.53 37.0 3.14e-01 74.5% 94.5%