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CAKLQF020000005.1__CAH1078124.1__SAMEA5780031_01232__00077

Bact-Vir

CAKLQF020000005.1__CAH1078124.1__SAMEA5780031_01232__00077

Identity

Kingdom:
phage

Quality

86.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-100
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w36D01 1.10.10.1020 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RecBCD complex, subunit RecD, N-terminal domain 0.76 67.0 6.08e-01 94.0% 91.7%
2r18A02 1.10.8.880 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 0.58 35.0 4.05e-01 90.5% 84.7%
2icwG02 1.10.10.530 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 0.57 38.0 3.75e-01 98.8% 64.0%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 32.0 3.19e-01 100.0% 54.1%
1cukA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.53 37.0 3.91e-01 94.0% 84.2%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.52 37.0 3.79e-01 72.6% 81.5%
1wojA00 3.90.1740.10 Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily 0.51 40.0 2.99e-01 95.2% 34.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953029 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.63 41.0 3.50e-01 90.5% 39.3%
4979179 103.7.1.1 alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind 0.63 46.0 4.14e-01 98.8% 54.6%
4932621 140.1.1.5 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 0.56 43.0 3.35e-01 83.3% 63.2%
3260646 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 29.0 3.13e-01 78.6% 57.3%
4363995 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.54 46.0 3.89e-01 100.0% 57.1%
3253674 140.1.1.5 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 0.53 42.0 3.12e-01 84.5% 57.2%
4952942 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 41.0 4.07e-01 98.8% 82.2%
D2 medium residues 120-214
PDB
Domain cluster: representative
Pfam (5)
AccessionNameScoreE-valueQ covHMM cov
PF04851.22 best ResIII 24.9 2.40e-05 93.7% 51.2%
PF00580.28 UvrD-helicase 34.5 2.50e-08 87.4% 26.2%
PF13086.13 AAA_11 32.1 1.50e-07 85.3% 27.6%
PF13604.13 AAA_30 46.9 4.00e-12 75.8% 33.5%
PF13245.13 AAA_19 61.2 1.70e-16 75.8% 47.0%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w36D02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 81.0 5.86e-01 100.0% 42.3%
1qhhA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 62.0 5.11e-01 97.9% 52.4%
7nadx01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 64.0 4.92e-01 96.8% 61.9%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 41.0 4.41e-01 89.5% 82.9%
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.57 45.0 3.59e-01 86.3% 67.9%
1s5jA04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.56 31.0 3.76e-01 88.4% 83.6%
3hibA01 1.10.3380.10 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain 0.52 36.0 3.37e-01 100.0% 56.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967314 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.80 67.0 5.50e-01 100.0% 51.5%
3574431 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 68.0 5.98e-01 100.0% 64.4%
3754549 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.74 69.0 4.88e-01 100.0% 54.7%
4027981 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.70 63.0 4.57e-01 98.9% 42.7%
3932500 109.4.1.566 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rav1p_C 0.53 42.0 3.08e-01 84.2% 94.5%
D3 medium residues 215-313_572-587
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13604.13 best AAA_30 60.1 3.60e-16 97.4% 48.2%
PF13245.13 AAA_19 60.2 3.50e-16 61.7% 51.5%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e1sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.96 85.0 6.68e-01 100.0% 49.5%
1w36D02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 64.0 4.85e-01 79.1% 47.4%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 64.0 5.40e-01 86.1% 58.5%
1w36B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 58.0 4.45e-01 79.1% 50.4%
1pjrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 58.0 4.72e-01 80.0% 59.9%
6jimB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 51.0 4.77e-01 82.6% 58.0%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 51.0 4.27e-01 86.1% 44.4%
4b3fX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 56.0 3.94e-01 81.7% 53.5%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 49.0 4.61e-01 86.1% 61.8%
2gk6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 55.0 4.08e-01 83.5% 40.4%
3vkwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 49.0 4.55e-01 79.1% 61.3%
4idhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 56.0 4.53e-01 88.7% 60.6%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 44.0 4.14e-01 79.1% 60.4%
5fhgA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 57.0 4.68e-01 99.1% 79.3%
1rifA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 46.0 3.81e-01 79.1% 49.5%
1z6aA01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.58 44.0 3.66e-01 80.0% 69.4%
2fwrA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 46.0 4.00e-01 86.1% 58.4%
3dtnA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 43.0 3.64e-01 81.7% 64.7%
3kb6A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 36.0 3.50e-01 84.3% 58.0%
2qgzA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 40.0 3.55e-01 80.9% 94.9%
2gmsB01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 40.0 3.18e-01 87.8% 69.8%
3berA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 39.0 3.26e-01 85.2% 53.6%
1wpqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 39.0 3.33e-01 83.5% 62.8%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3970064 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.96 79.0 5.81e-01 84.3% 50.4%
3163821 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.96 79.0 5.84e-01 84.3% 49.4%
4046976 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.95 80.0 5.88e-01 86.1% 51.0%
3965541 2004.1.1.522 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_19 0.91 89.0 6.39e-01 100.0% 49.5%
None 0.91 85.0 6.47e-01 97.4% 48.3%
4032496 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.90 87.0 6.50e-01 100.0% 49.0%
3589264 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.88 84.0 6.19e-01 100.0% 43.8%
3287999 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.86 83.0 6.06e-01 100.0% 53.3%
3278695 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.85 62.0 5.05e-01 84.3% 43.5%
3604447 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.83 69.0 5.40e-01 92.2% 45.5%
3874009 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.80 76.0 5.61e-01 99.1% 44.2%
3959397 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.79 59.0 4.35e-01 77.4% 42.1%
3679034 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.78 64.0 4.46e-01 86.1% 44.1%
4950790 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.78 66.0 3.85e-01 89.6% 42.8%
3752894 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.78 61.0 4.21e-01 81.7% 42.3%
3391247 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.77 60.0 4.16e-01 81.7% 42.5%
3908064 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.77 61.0 4.31e-01 83.5% 43.6%
3741693 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.77 63.0 3.83e-01 87.8% 75.0%
4964810 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.77 66.0 3.84e-01 91.3% 70.8%
4266784 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.76 63.0 3.88e-01 87.8% 79.3%
1167709 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.76 63.0 5.32e-01 86.1% 57.9%
4962524 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.76 63.0 3.91e-01 87.8% 79.8%
3286906 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.76 59.0 4.71e-01 80.9% 49.8%
3247067 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.76 60.0 4.07e-01 81.7% 56.1%
3735988 2004.1.1.522 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_19 0.76 60.0 3.99e-01 81.7% 54.9%
3924486 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.75 59.0 3.74e-01 80.9% 39.4%
4951117 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.75 57.0 4.07e-01 79.1% 42.3%
3980599 2004.1.1.89 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH 0.74 59.0 4.50e-01 86.1% 38.8%
3788919 2004.1.1.505 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.74 57.0 3.98e-01 80.9% 56.3%
3946014 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 57.0 4.62e-01 80.9% 73.8%
4769259 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.74 56.0 5.07e-01 79.1% 76.8%
3695651 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.74 57.0 3.84e-01 80.0% 52.1%
3956232 2004.1.1.89 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH 0.73 59.0 4.53e-01 86.1% 39.9%
3944062 2004.1.1.89 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH 0.73 58.0 4.41e-01 86.1% 38.0%
3914297 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.73 60.0 4.24e-01 87.0% 44.2%
2512657 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.73 53.0 4.76e-01 86.1% 54.7%
3208390 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.73 56.0 3.72e-01 80.0% 49.5%
3589168 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.73 56.0 4.26e-01 80.0% 63.5%
3971494 2004.1.1.89 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH 0.73 58.0 4.57e-01 86.1% 43.2%
3684643 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.73 57.0 3.78e-01 80.9% 41.0%
3959799 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 57.0 4.49e-01 86.1% 41.3%
3185865 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.72 59.0 3.95e-01 86.1% 47.8%
3240265 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.72 57.0 4.08e-01 83.5% 50.2%
5023408 2004.1.1.89 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH 0.71 55.0 4.47e-01 86.1% 44.3%
None 0.71 57.0 3.98e-01 83.5% 38.2%
3172157 2004.1.1.185 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.71 58.0 4.13e-01 86.1% 42.2%
None 0.71 54.0 3.89e-01 79.1% 48.8%
3424374 2004.1.1.185 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.71 59.0 4.05e-01 87.8% 51.1%
3801861 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.71 54.0 3.75e-01 79.1% 55.3%
3964961 2004.1.1.117 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.70 57.0 4.58e-01 86.1% 48.6%
3677285 2004.1.1.529 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 0.69 53.0 3.67e-01 79.1% 37.9%
3164472 2004.1.1.117 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.68 57.0 5.02e-01 87.8% 77.5%
3253942 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.68 54.0 3.81e-01 83.5% 37.6%
3560235 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.68 53.0 3.41e-01 81.7% 32.3%
3921055 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.67 51.0 3.50e-01 79.1% 47.0%
1187396 2004.1.1.117 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.67 57.0 4.42e-01 89.6% 58.2%
2092590 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.67 51.0 4.10e-01 79.1% 52.4%
4982524 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 51.0 4.22e-01 81.7% 57.0%
4182860 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.65 50.0 4.44e-01 80.9% 62.4%
4174362 2004.1.1.28 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.65 44.0 3.98e-01 78.3% 51.0%
4081305 2004.1.1.28 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.65 47.0 3.97e-01 86.1% 45.8%
4888963 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.63 48.0 3.78e-01 80.0% 44.4%
3899696 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.63 48.0 3.92e-01 80.0% 49.8%
4044261 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.63 48.0 4.17e-01 80.9% 66.1%
5011668 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.63 48.0 4.11e-01 80.9% 55.7%
3164108 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.62 47.0 4.65e-01 80.0% 83.2%
3519820 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.62 49.0 3.04e-01 83.5% 23.9%
3185851 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 50.0 3.17e-01 88.7% 61.8%
5078264 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.59 47.0 3.66e-01 85.2% 45.6%
4341314 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.59 42.0 4.25e-01 75.7% 74.8%
4032610 2004.1.1.238 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,ResIII 0.57 51.0 3.40e-01 97.4% 74.1%
4977811 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 46.0 3.96e-01 86.1% 57.2%
3955799 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.55 48.0 3.12e-01 95.7% 66.0%
3410570 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 44.0 3.24e-01 86.1% 86.0%
4983350 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.53 46.0 3.07e-01 94.8% 55.9%
3287531 2004.1.1.507 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, Helicase_C, RecG_dom3_C 0.52 45.0 2.96e-01 98.3% 68.0%
4271713 7574.1.1.7 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N 0.51 40.0 3.31e-01 85.2% 63.3%
3908434 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.51 45.0 3.33e-01 96.5% 53.4%
D4 medium residues 375-447_512-571
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01443.25 best Viral_helicase1 28.4 2.00e-06 79.7% 24.1%
PF13538.13 UvrD_C_2 46.0 5.30e-12 36.8% 96.2%
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e1sA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.90 68.0 6.65e-01 100.0% 73.0%
1w36D03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 82.0 7.35e-01 100.0% 78.6%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 59.0 6.00e-01 90.2% 73.8%
6jimB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 51.0 5.20e-01 95.5% 67.7%
3vkwA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 53.0 5.11e-01 97.7% 64.2%
4b3fX03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 62.0 5.27e-01 99.2% 60.4%
5rl9B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 54.0 5.24e-01 97.7% 72.5%
5eanA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 63.0 5.33e-01 99.2% 62.3%
2xzlA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 63.0 5.29e-01 98.5% 62.7%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 58.0 5.39e-01 97.7% 74.5%
6vsxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 58.0 5.42e-01 97.7% 77.4%
4s1wB02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.65 49.0 4.77e-01 95.5% 71.9%
3jb9X01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 4.90e-01 98.5% 57.6%
3u4qA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 4.66e-01 97.7% 68.6%
1m3sB00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.63 45.0 4.06e-01 98.5% 53.6%
4fe7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 37.0 3.86e-01 79.7% 66.4%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 51.0 4.56e-01 98.5% 67.4%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 53.0 4.59e-01 98.5% 72.0%
6yhrA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 53.0 4.52e-01 98.5% 74.8%
5bseA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 41.0 3.84e-01 99.2% 57.8%
3rc3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 49.0 4.66e-01 98.5% 78.0%
3qsgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 40.0 3.78e-01 100.0% 57.7%
1jeoA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 44.0 4.01e-01 97.0% 61.6%
3rc3A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 52.0 5.05e-01 98.5% 92.4%
2f1kA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 40.0 3.75e-01 99.2% 58.2%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 52.0 4.97e-01 98.5% 92.6%
3d1lB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 42.0 4.00e-01 91.0% 65.2%
3tpfA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.56 50.0 4.72e-01 98.5% 90.1%
5lb3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 50.0 4.22e-01 99.2% 71.5%
1cnzA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.56 42.0 3.05e-01 89.5% 28.9%
4dcuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 43.0 4.23e-01 86.5% 77.9%
2g5cA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 40.0 3.75e-01 99.2% 59.8%
3hwrA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 41.0 3.87e-01 99.2% 62.7%
1hyhA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 44.0 4.41e-01 100.0% 83.7%
4ccsA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 44.0 4.59e-01 92.5% 94.3%
7a8rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 50.0 4.35e-01 100.0% 82.4%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 45.0 4.48e-01 98.5% 86.9%
2wyoA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.54 45.0 4.46e-01 90.2% 99.3%
4dcmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 49.0 4.50e-01 100.0% 77.0%
1fy2A00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.54 48.0 4.12e-01 100.0% 60.0%
3e15A00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 49.0 3.80e-01 100.0% 83.5%
3hn2B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 40.0 3.73e-01 99.2% 60.6%
4zjpA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 43.0 4.26e-01 94.7% 81.2%
2xgjB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 48.0 4.10e-01 100.0% 93.5%
7rzy101 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 48.0 4.27e-01 99.2% 71.7%
1wpwA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.53 39.0 2.95e-01 88.7% 31.0%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.52 42.0 4.12e-01 87.2% 81.4%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 46.0 3.97e-01 97.7% 63.4%
4kq9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 43.0 3.83e-01 94.7% 60.5%
3sqlA02 3.40.50.10870 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycosyl hydrolase family 3 0.52 42.0 4.05e-01 98.5% 76.5%
3ahcA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.51 45.0 3.31e-01 99.2% 44.6%
3d02A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 43.0 4.18e-01 97.7% 81.7%
5dteA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 42.0 4.05e-01 94.7% 78.4%
1reqA02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.51 41.0 3.90e-01 97.0% 72.0%
3rotA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 41.0 4.15e-01 97.7% 87.6%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 3.58e-01 98.5% 55.0%
5wt3A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 45.0 4.09e-01 98.5% 72.9%
1gcaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 42.0 3.98e-01 92.5% 79.5%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3163822 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.91 76.0 7.11e-01 100.0% 73.5%
3943705 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.90 83.0 7.53e-01 100.0% 74.7%
4429341 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.90 83.0 7.35e-01 100.0% 70.6%
3978023 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.90 83.0 7.51e-01 100.0% 74.7%
3278699 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.89 62.0 5.88e-01 97.7% 61.3%
4115090 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.88 84.0 7.58e-01 98.5% 78.8%
3958144 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 79.0 7.15e-01 100.0% 74.1%
1889033 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.87 83.0 6.46e-01 100.0% 74.7%
3590487 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.87 71.0 6.85e-01 99.2% 77.2%
None 0.86 70.0 6.74e-01 98.5% 76.6%
4518186 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.85 81.0 7.35e-01 100.0% 78.8%
3970065 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 77.0 7.05e-01 100.0% 77.0%
3603695 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.79 69.0 6.08e-01 100.0% 65.4%
3807611 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 63.0 5.93e-01 100.0% 71.0%
4331804 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.78 59.0 5.03e-01 98.5% 52.8%
3605331 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 63.0 5.22e-01 99.2% 52.3%
3589167 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.77 56.0 5.50e-01 92.5% 70.7%
4029378 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 64.0 5.33e-01 100.0% 54.9%
3796494 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 63.0 4.99e-01 99.2% 46.8%
3208633 2004.1.1.768 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_12, AAA_19 0.74 63.0 3.80e-01 98.5% 15.1%
3247954 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 60.0 5.11e-01 99.2% 56.1%
5005831 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.72 63.0 5.45e-01 98.5% 63.7%
3688101 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.72 65.0 5.34e-01 99.2% 57.3%
3511279 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 68.0 5.86e-01 100.0% 68.7%
4951118 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.72 67.0 5.28e-01 99.2% 58.3%
3874017 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.71 68.0 6.04e-01 100.0% 83.9%
5015395 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.71 60.0 5.24e-01 98.5% 62.2%
3777175 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.70 67.0 6.11e-01 100.0% 83.5%
3439817 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.70 58.0 4.95e-01 99.2% 55.7%
2095415 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.70 55.0 5.10e-01 97.7% 67.5%
3525324 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.70 64.0 5.22e-01 98.5% 56.9%
3397089 2004.1.1.920 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_11, AAA_12 0.69 63.0 3.94e-01 98.5% 20.8%
3199673 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 65.0 5.16e-01 99.2% 57.2%
3930896 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 60.0 5.18e-01 98.5% 62.1%
3593770 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 63.0 5.20e-01 99.2% 58.6%
3389373 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 61.0 5.20e-01 98.5% 61.5%
5024276 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 63.0 5.14e-01 98.5% 55.7%
3733470 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 64.0 5.61e-01 98.5% 69.5%
3629102 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 64.0 5.08e-01 98.5% 53.2%
3391041 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 64.0 3.86e-01 98.5% 16.6%
3535364 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 65.0 5.44e-01 99.2% 62.9%
3247933 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 64.0 5.14e-01 98.5% 55.4%
3485645 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 65.0 4.99e-01 99.2% 49.6%
3177411 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.69 64.0 5.22e-01 98.5% 59.6%
3265097 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.68 64.0 4.99e-01 100.0% 54.1%
3731003 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 60.0 4.95e-01 100.0% 54.7%
3743179 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 64.0 3.77e-01 99.2% 15.1%
3432662 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.68 60.0 5.12e-01 98.5% 60.5%
3549903 2004.1.1.1002 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII, AAA_11, AAA_12 0.68 64.0 3.90e-01 98.5% 18.6%
3210977 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.68 60.0 5.02e-01 98.5% 58.1%
3917194 2004.1.1.185 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.68 64.0 4.09e-01 100.0% 29.7%
3697444 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.68 63.0 5.02e-01 99.2% 53.1%
3227245 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 64.0 5.21e-01 99.2% 60.9%
3639642 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 64.0 5.10e-01 99.2% 55.0%
2142440 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 62.0 5.26e-01 98.5% 62.9%
3633429 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 63.0 5.12e-01 99.2% 57.0%
3705020 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 63.0 4.75e-01 98.5% 64.7%
3810871 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 63.0 5.23e-01 99.2% 63.6%
3784726 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 61.0 4.94e-01 99.2% 54.8%
3567663 2004.1.1.185 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.67 63.0 4.03e-01 98.5% 95.1%
3760903 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.67 58.0 5.22e-01 91.7% 70.4%
3189268 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.67 63.0 4.97e-01 99.2% 62.4%
3639517 2004.1.1.768 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_12, AAA_19 0.66 63.0 3.85e-01 99.2% 22.1%
3206956 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.66 62.0 4.82e-01 99.2% 60.7%
3891107 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.66 62.0 5.13e-01 98.5% 68.2%
3561762 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 57.0 5.01e-01 93.2% 63.7%
3266728 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.66 61.0 5.14e-01 98.5% 61.4%
3558535 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 58.0 5.18e-01 92.5% 70.0%
3415146 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.66 62.0 5.02e-01 99.2% 57.4%
3542881 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.66 62.0 5.01e-01 99.2% 66.4%
3174411 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.66 61.0 3.73e-01 97.0% 45.7%
3880691 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.65 61.0 5.03e-01 99.2% 63.1%
3783362 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.65 59.0 3.69e-01 95.5% 45.4%
3955473 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.65 61.0 5.29e-01 99.2% 73.8%
3475074 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.64 60.0 4.82e-01 99.2% 61.2%
3423525 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.63 59.0 4.98e-01 99.2% 74.3%
3980676 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.62 57.0 4.72e-01 100.0% 68.7%
3261718 2004.1.1.33 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind 0.60 56.0 4.73e-01 100.0% 73.5%
5057533 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.59 42.0 3.97e-01 99.2% 60.0%
3943846 2003.1.1.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_2 0.59 43.0 4.06e-01 99.2% 62.5%
5066234 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.59 41.0 3.92e-01 100.0% 61.3%
5042460 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 53.0 4.72e-01 97.7% 86.9%
3213189 2004.1.1.33 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind 0.58 54.0 4.50e-01 99.2% 72.3%
142972 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.58 41.0 3.93e-01 99.2% 61.6%
4986472 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 52.0 4.71e-01 98.5% 85.7%
4982497 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 51.0 4.50e-01 98.5% 80.0%
4948730 2003.1.14.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace 0.57 51.0 3.97e-01 98.5% 77.2%
4971018 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.56 50.0 4.46e-01 98.5% 81.5%
1862389 2004.1.1.33 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind 0.56 52.0 4.32e-01 100.0% 68.0%
4989997 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 50.0 4.71e-01 97.7% 90.2%
4680262 2003.1.14.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace 0.56 45.0 4.17e-01 97.7% 66.7%
5053285 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 49.0 4.37e-01 97.7% 82.6%
5053950 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 51.0 3.88e-01 98.5% 46.6%
3484743 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.55 42.0 3.79e-01 99.2% 57.8%
3232466 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.55 47.0 3.73e-01 100.0% 44.6%
4999687 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 48.0 4.34e-01 98.5% 86.5%
3941744 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.53 37.0 3.69e-01 71.4% 68.6%
D5 medium residues 448-511
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18335.8 best SH3_13 41.8 1.00e-10 68.8% 61.5%
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 59.0 6.48e-01 89.1% 100.0%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.77 70.0 6.84e-01 100.0% 95.7%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 56.0 6.08e-01 98.4% 100.0%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.72 61.0 5.64e-01 95.3% 85.5%
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.72 36.0 4.75e-01 78.1% 93.9%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 64.0 5.93e-01 100.0% 81.5%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.78e-01 95.3% 79.2%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.57e-01 90.6% 96.1%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.70 59.0 5.47e-01 95.3% 84.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 57.0 5.89e-01 87.5% 96.6%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 48.0 5.45e-01 81.2% 100.0%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.30e-01 89.1% 84.6%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.52e-01 87.5% 89.6%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 57.0 5.03e-01 98.4% 62.5%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 5.27e-01 95.3% 84.1%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 55.0 4.47e-01 89.1% 49.6%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 55.0 5.53e-01 89.1% 90.6%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 55.0 5.26e-01 95.3% 93.4%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 4.70e-01 98.4% 59.4%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 53.0 5.51e-01 89.1% 100.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 54.0 5.58e-01 89.1% 100.0%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.65 52.0 4.23e-01 87.5% 89.3%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.81e-01 95.3% 73.7%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 5.18e-01 89.1% 84.3%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.26e-01 100.0% 79.5%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 53.0 5.05e-01 90.6% 88.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 5.31e-01 96.9% 96.6%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 5.26e-01 96.9% 91.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.64 45.0 4.83e-01 87.5% 92.3%
2ky9A01 2.30.30.1130 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 5.21e-01 92.2% 88.1%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 50.0 4.84e-01 95.3% 93.4%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.61e-01 93.8% 81.2%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 47.0 4.94e-01 82.8% 100.0%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 5.10e-01 95.3% 92.9%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 4.99e-01 98.4% 93.2%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 46.0 3.09e-01 82.8% 69.6%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 5.04e-01 98.4% 93.1%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.60 50.0 3.63e-01 98.4% 33.8%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.60 50.0 5.16e-01 96.9% 100.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.84e-01 98.4% 95.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.60 46.0 4.70e-01 87.5% 100.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.79e-01 98.4% 83.1%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 49.0 4.50e-01 98.4% 75.8%
1jlxA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 49.0 3.83e-01 100.0% 96.9%
4u3vA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.58 44.0 3.03e-01 82.8% 67.4%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 39.0 3.88e-01 70.3% 74.6%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 4.02e-01 76.6% 89.4%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 43.0 4.31e-01 85.9% 92.6%
3wknF00 6.20.50.120 Special › Other non-globular › N-terminal domain of TfIIb › 0.55 33.0 3.73e-01 78.1% 82.6%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.54 40.0 2.57e-01 84.4% 91.7%
2g1lA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.54 43.0 3.79e-01 92.2% 96.1%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.69e-01 90.6% 89.8%
1l5jA02 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.53 37.0 2.56e-01 73.4% 80.0%
1g29103 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 36.0 3.64e-01 73.4% 100.0%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 41.0 2.97e-01 89.1% 93.7%
2k3dA00 3.10.450.130 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains 0.52 40.0 3.74e-01 87.5% 88.5%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.52 37.0 3.73e-01 84.4% 77.3%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 43.0 2.86e-01 100.0% 35.3%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.51 40.0 3.72e-01 92.2% 94.3%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3166323 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 73.0 7.09e-01 100.0% 80.0%
3964560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 82.0 7.95e-01 100.0% 94.3%
4117297 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 80.0 7.74e-01 98.4% 95.7%
3958145 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 78.0 7.83e-01 96.9% 100.0%
3974170 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 80.0 6.70e-01 100.0% 74.0%
3278853 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 73.0 7.34e-01 96.9% 95.4%
3172952 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 69.0 4.98e-01 100.0% 97.8%
4284118 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 66.0 6.24e-01 95.3% 93.3%
3589606 4.1.1.109 beta barrels › SH3 › SH3 › SH3 › SH3_13 0.74 64.0 6.24e-01 95.3% 100.0%
4271087 4.1.1.444 beta barrels › SH3 › SH3 › SH3 › SplA 0.73 59.0 5.77e-01 90.6% 80.0%
4347063 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 66.0 5.12e-01 100.0% 94.8%
3491785 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 65.0 5.34e-01 100.0% 98.3%
1746358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.41e-01 100.0% 96.3%
3385654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.09e-01 96.9% 96.7%
3023952 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.21e-01 98.4% 97.3%
3759446 4.1.1.73 beta barrels › SH3 › SH3 › SH3 › Cul7 0.71 59.0 5.27e-01 95.3% 64.4%
3278698 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.36e-01 100.0% 95.2%
3511277 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.74e-01 96.9% 100.0%
3622911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 58.0 5.70e-01 95.3% 97.1%
3225762 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 57.0 5.40e-01 90.6% 85.3%
4101587 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.69 61.0 5.20e-01 98.4% 96.2%
3274582 4.1.1.365 beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.69 53.0 5.64e-01 93.8% 96.4%
2726885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.08e-01 100.0% 94.7%
3482868 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 54.0 5.79e-01 84.4% 100.0%
5044373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.44e-01 98.4% 88.3%
3505437 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 56.0 5.06e-01 89.1% 70.6%
3022070 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.68 60.0 5.01e-01 100.0% 93.9%
3898170 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 57.0 5.41e-01 90.6% 94.7%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 56.0 5.62e-01 89.1% 93.8%
513 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 56.0 5.49e-01 89.1% 95.7%
3955235 4.1.1.183 beta barrels › SH3 › SH3 › SH3 › DUF4926 0.68 58.0 5.43e-01 95.3% 77.5%
3898952 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 59.0 5.60e-01 95.3% 84.0%
4018667 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 56.0 4.59e-01 90.6% 53.0%
3763497 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 55.0 5.26e-01 89.1% 88.0%
3477037 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 55.0 5.37e-01 89.1% 91.4%
3174058 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 54.0 5.18e-01 89.1% 80.0%
3627869 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.67 57.0 4.26e-01 96.9% 38.7%
3599257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.90e-01 100.0% 95.4%
3801719 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 54.0 5.23e-01 87.5% 81.4%
4952478 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 55.0 5.26e-01 93.8% 92.0%
3485745 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 52.0 5.40e-01 85.9% 95.0%
4960540 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.84e-01 98.4% 98.5%
4002679 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.66 50.0 4.10e-01 92.2% 44.2%
3702177 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 55.0 4.78e-01 95.3% 91.0%
3749194 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 50.0 5.05e-01 82.8% 84.4%
1826883 4.1.1.83 beta barrels › SH3 › SH3 › SH3 › SH3_6 0.65 53.0 4.93e-01 90.6% 98.8%
3398464 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.43e-01 85.9% 100.0%
3490689 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 56.0 5.43e-01 96.9% 90.0%
4013671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 5.34e-01 84.4% 100.0%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 5.31e-01 98.4% 90.8%
3529708 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 52.0 4.93e-01 89.1% 78.7%
3170922 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 50.0 4.95e-01 85.9% 82.4%
4508412 4.1.1.437 beta barrels › SH3 › SH3 › SH3 › PF29224 0.63 48.0 4.93e-01 87.5% 86.7%
1386398 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.83e-01 87.5% 76.0%
3738641 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.63 52.0 5.00e-01 95.3% 78.7%
3788449 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 5.00e-01 89.1% 82.9%
3176333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 5.33e-01 100.0% 92.3%
3926701 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 52.0 5.15e-01 90.6% 86.8%
3802925 4.1.1.296 beta barrels › SH3 › SH3 › SH3 › TDBD 0.63 50.0 4.71e-01 89.1% 92.5%
3170404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.58e-01 100.0% 60.0%
3419491 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 51.0 5.24e-01 95.3% 98.3%
3170688 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.62 51.0 5.28e-01 98.4% 98.3%
4020558 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.03e-01 89.1% 89.2%
3929373 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.62 51.0 5.30e-01 93.8% 98.3%
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 50.0 4.91e-01 93.8% 82.9%
3692073 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 50.0 4.88e-01 89.1% 82.9%
4957888 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.61 50.0 5.15e-01 98.4% 100.0%
3220497 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.60 47.0 3.28e-01 85.9% 35.0%
3214474 4.1.1.390 beta barrels › SH3 › SH3 › SH3 › PF29855 0.60 51.0 4.45e-01 95.3% 61.0%
3185321 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.60 51.0 4.88e-01 95.3% 90.7%
3953109 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.60 50.0 4.44e-01 95.3% 72.6%
3972820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.58e-01 90.6% 96.2%
3672735 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.60 51.0 5.09e-01 98.4% 93.8%
4272564 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.60 49.0 4.24e-01 96.9% 65.7%
4545520 4.7.1.7 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.59 50.0 4.60e-01 96.9% 81.2%
3510681 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 4.60e-01 90.6% 94.7%
3398023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 51.0 3.79e-01 100.0% 41.1%
3425451 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.59 51.0 4.25e-01 100.0% 77.4%
4210485 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.59 49.0 4.94e-01 98.4% 93.8%
3714156 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.66e-01 100.0% 80.0%
4024240 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.59e-01 95.3% 83.7%
3712451 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.14e-01 100.0% 54.4%
3405627 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.49e-01 100.0% 67.4%
146236 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.58 48.0 4.13e-01 96.9% 56.5%
165654 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.58 51.0 4.88e-01 100.0% 87.8%
3937299 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.27e-01 92.2% 65.6%
3608562 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 3.70e-01 98.4% 88.7%
4664510 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 44.0 4.42e-01 84.4% 83.1%
4598590 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.57 48.0 4.75e-01 98.4% 91.4%
3437523 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.56 48.0 4.71e-01 98.4% 91.4%
4625654 4.1.1.445 beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.55 45.0 4.40e-01 98.4% 92.0%