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CAKLQF020000005.1__CAH1078357.1__SAMEA5780031_01313__00155
Bact-VirCAKLQF020000005.1__CAH1078357.1__SAMEA5780031_01313__00155
Identity
- Kingdom:
- phage
Quality
88.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-148
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ltmA00 | 3.30.1370.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Scaffold protein Nfu/NifU, N-terminal domain | 0.65 | 47.0 | 4.96e-01 | 87.7% | 85.0% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.61 | 39.0 | 4.65e-01 | 87.7% | 96.4% |
| 2rhqB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 49.0 | 4.14e-01 | 86.9% | 98.0% |
| 6pqhA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 47.0 | 3.35e-01 | 86.9% | 85.9% |
| 4g3cA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 32.0 | 3.25e-01 | 75.4% | 52.4% |
| 1atiB01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 45.0 | 3.41e-01 | 88.5% | 87.2% |
| 3i7fB02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 45.0 | 3.31e-01 | 88.5% | 77.6% |
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.53 | 45.0 | 3.52e-01 | 91.8% | 87.2% |
| 2vtfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.66e-01 | 87.7% | 82.4% |
| 5bk7H01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 40.0 | 4.01e-01 | 100.0% | 77.5% |
| 3sd2A01 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 28.0 | 3.36e-01 | 86.9% | 81.8% |
| 7uwjC02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.51 | 31.0 | 3.43e-01 | 87.7% | 76.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966984 | 306.2.2.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › Hypothetical protein SAV1430 | 0.79 | 74.0 | 7.41e-01 | 99.2% | 97.6% |
| 3280417 | 241.1.1.16 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF28092 | 0.68 | 63.0 | 5.36e-01 | 100.0% | 87.2% |
| 4014942 | 306.2.2.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › Hypothetical protein SAV1430 | 0.64 | 49.0 | 5.30e-01 | 87.7% | 93.3% |
| 3838528 | 319.3.1.0 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ | 0.60 | 35.0 | 3.67e-01 | 83.6% | 61.7% |
| 3788110 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.59 | 48.0 | 3.45e-01 | 86.9% | 88.3% |
| 4928280 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.59 | 47.0 | 3.67e-01 | 86.1% | 93.7% |
| 3595163 | 306.2.2.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › Hypothetical protein SAV1430 | 0.59 | 48.0 | 4.84e-01 | 87.7% | 91.2% |
| 3173696 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.58 | 47.0 | 3.40e-01 | 88.5% | 86.6% |
| 4341249 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.57 | 47.0 | 3.85e-01 | 88.5% | 94.7% |
| 3599249 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.56 | 45.0 | 3.20e-01 | 88.5% | 87.7% |
| 3258230 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.54 | 45.0 | 3.47e-01 | 89.3% | 85.1% |
| 3249366 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 30.0 | 3.50e-01 | 87.7% | 81.2% |
| 3287845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.45e-01 | 87.7% | 70.9% |
| 3895715 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 3.97e-01 | 87.7% | 96.7% |
| 3924218 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 40.0 | 4.16e-01 | 87.7% | 89.6% |
| 4843690 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.50 | 35.0 | 3.55e-01 | 87.7% | 72.5% |